RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 KIF16BQ96L93 1317 aa20.8■□□□□ 0.92
TMEM50B-205ENST00000459909 FANCIQ9NVI1 1328 aa20.8■□□□□ 0.92
TMEM50B-205ENST00000459909 MGAMO43451 1857 aa20.8■□□□□ 0.92
TMEM50B-205ENST00000459909 CDC42EP5Q6NZY7 148 aa20.8■□□□□ 0.92
TMEM50B-205ENST00000459909 SCYL3Q8IZE3 742 aa20.8■□□□□ 0.92
TMEM50B-205ENST00000459909 TDHQ8IZJ6 230 aa20.8■□□□□ 0.92
TMEM50B-205ENST00000459909 VGLL2Q8N8G2 317 aa20.8■□□□□ 0.92
TMEM50B-205ENST00000459909 SMCR8Q8TEV9 937 aaPredicted RBP20.8■□□□□ 0.92
TMEM50B-205ENST00000459909 COA7Q96BR5 231 aa20.8■□□□□ 0.92
TMEM50B-205ENST00000459909 CDCA7LQ96GN5 454 aa20.8■□□□□ 0.92
TMEM50B-205ENST00000459909 KAZALD1Q96I82 304 aa20.8■□□□□ 0.92
TMEM50B-205ENST00000459909 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.8■□□□□ 0.92
TMEM50B-205ENST00000459909 PICK1Q9NRD5 415 aa20.8■□□□□ 0.92
TMEM50B-205ENST00000459909 TAOK2Q9UL54 1235 aa20.8■□□□□ 0.92
TMEM50B-205ENST00000459909 NFIAQ12857 509 aa20.79■□□□□ 0.92
TMEM50B-205ENST00000459909 LRRC24Q50LG9 513 aa20.79■□□□□ 0.92
TMEM50B-205ENST00000459909 GADL1Q6ZQY3 521 aa20.79■□□□□ 0.92
TMEM50B-205ENST00000459909 WDR66Q8TBY9 1149 aa20.79■□□□□ 0.92
TMEM50B-205ENST00000459909 COL25A1Q9BXS0 654 aaPredicted RBP20.79■□□□□ 0.92
TMEM50B-205ENST00000459909 DAGLAQ9Y4D2 1042 aa20.79■□□□□ 0.92
TMEM50B-205ENST00000459909 CACNA1FO60840 1977 aa20.78■□□□□ 0.92
TMEM50B-205ENST00000459909 PTPRAP18433 802 aa20.78■□□□□ 0.92
TMEM50B-205ENST00000459909 SLFN5Q08AF3 891 aa20.78■□□□□ 0.92
TMEM50B-205ENST00000459909 SRCIN1Q9C0H9 1055 aa20.78■□□□□ 0.92
TMEM50B-205ENST00000459909 NBPF3Q9H094 633 aa20.78■□□□□ 0.92
TMEM50B-205ENST00000459909 FAM198AQ9UFP1 575 aa20.78■□□□□ 0.92
TMEM50B-205ENST00000459909 AFG3L2Q9Y4W6 797 aa20.78■□□□□ 0.92
TMEM50B-205ENST00000459909 PHF20L1A8MW92 1017 aa20.77■□□□□ 0.92
TMEM50B-205ENST00000459909 IFIT1P09914 478 aaKnown RBP20.77■□□□□ 0.92
TMEM50B-205ENST00000459909 MAGEA10P43363 369 aaPredicted RBP20.77■□□□□ 0.92
TMEM50B-205ENST00000459909 RABL6Q3YEC7 729 aaPredicted RBP20.76■□□□□ 0.91
TMEM50B-205ENST00000459909 ATRNL1Q5VV63 1379 aa20.75■□□□□ 0.91
TMEM50B-205ENST00000459909 HMGCRP04035 888 aa20.75■□□□□ 0.91
TMEM50B-205ENST00000459909 NBPF7P0C2Y1 421 aaPredicted RBP20.75■□□□□ 0.91
TMEM50B-205ENST00000459909 SYN1P17600 705 aa20.75■□□□□ 0.91
TMEM50B-205ENST00000459909 EXOSC9Q06265 439 aaKnown RBP20.75■□□□□ 0.91
TMEM50B-205ENST00000459909 PUM3Q15397 648 aaKnown RBP20.75■□□□□ 0.91
TMEM50B-205ENST00000459909 DIXDC1Q155Q3 683 aa20.75■□□□□ 0.91
TMEM50B-205ENST00000459909 FAM110CQ1W6H9 321 aa20.75■□□□□ 0.91
TMEM50B-205ENST00000459909 SLC4A10Q6U841 1118 aa20.75■□□□□ 0.91
TMEM50B-205ENST00000459909 ANKRD13CQ8N6S4 541 aa20.75■□□□□ 0.91
TMEM50B-205ENST00000459909 C11orf49Q9H6J7 331 aa20.75■□□□□ 0.91
TMEM50B-205ENST00000459909 USP40Q9NVE5 1235 aa20.75■□□□□ 0.91
TMEM50B-205ENST00000459909 RPTORQ8N122 1335 aa20.75■□□□□ 0.91
TMEM50B-205ENST00000459909 ALPK3Q96L96 1907 aa20.74■□□□□ 0.91
TMEM50B-205ENST00000459909 FGFR2P21802 821 aa20.74■□□□□ 0.91
TMEM50B-205ENST00000459909 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.74■□□□□ 0.91
TMEM50B-205ENST00000459909 ZFPM1Q8IX07 1006 aa20.74■□□□□ 0.91
TMEM50B-205ENST00000459909 UBE2OQ9C0C9 1292 aaKnown RBP20.74■□□□□ 0.91
TMEM50B-205ENST00000459909 BICC1Q9H694 974 aaKnown RBP20.74■□□□□ 0.91
TMEM50B-205ENST00000459909 HMX1Q9NP08 348 aaPredicted RBP20.74■□□□□ 0.91
TMEM50B-205ENST00000459909 AGTPBP1Q9UPW5 1226 aa20.74■□□□□ 0.91
TMEM50B-205ENST00000459909 UTYO14607 1347 aa20.74■□□□□ 0.91
TMEM50B-205ENST00000459909 PNMA3Q9UL41 463 aa20.73■□□□□ 0.91
TMEM50B-205ENST00000459909 UNC80Q8N2C7 3258 aa20.73■□□□□ 0.91
TMEM50B-205ENST00000459909 MAP3K10Q02779 954 aa20.72■□□□□ 0.91
TMEM50B-205ENST00000459909 LRRFIP2Q9Y608 721 aaKnown RBP20.72■□□□□ 0.91
TMEM50B-205ENST00000459909 TRIM75PA6NK02 468 aa20.71■□□□□ 0.91
TMEM50B-205ENST00000459909 CTNND1O60716 968 aaKnown RBP20.71■□□□□ 0.91
TMEM50B-205ENST00000459909 ENTPD3O75355 529 aa20.71■□□□□ 0.91
TMEM50B-205ENST00000459909 PRDX5P30044 214 aa20.71■□□□□ 0.91
TMEM50B-205ENST00000459909 ANKRD44Q8N8A2 993 aa20.71■□□□□ 0.91
TMEM50B-205ENST00000459909 IDI2Q9BXS1 227 aa20.71■□□□□ 0.91
TMEM50B-205ENST00000459909 OGDHLQ9ULD0 1010 aa20.71■□□□□ 0.91
TMEM50B-205ENST00000459909 LDHBP07195 334 aaKnown RBP20.7■□□□□ 0.9
TMEM50B-205ENST00000459909 SLC5A1P13866 664 aa20.7■□□□□ 0.9
TMEM50B-205ENST00000459909 RGS3P49796 1198 aa20.7■□□□□ 0.9
TMEM50B-205ENST00000459909 TRMT2AQ8IZ69 625 aaKnown RBP20.7■□□□□ 0.9
TMEM50B-205ENST00000459909 KLHDC4Q8TBB5 520 aa20.7■□□□□ 0.9
TMEM50B-205ENST00000459909 LPIN2Q92539 896 aa20.7■□□□□ 0.9
TMEM50B-205ENST00000459909 GCLCP48506 637 aaPredicted RBP20.69■□□□□ 0.9
TMEM50B-205ENST00000459909 ZSCAN29Q8IWY8 852 aaPredicted RBP20.69■□□□□ 0.9
TMEM50B-205ENST00000459909 GJD2Q9UKL4 321 aa20.69■□□□□ 0.9
TMEM50B-205ENST00000459909 AK9Q5TCS8 1911 aa20.68■□□□□ 0.9
TMEM50B-205ENST00000459909 TREML2Q5T2D2 321 aa20.68■□□□□ 0.9
TMEM50B-205ENST00000459909 FAM109BQ6ICB4 259 aaPredicted RBP20.68■□□□□ 0.9
TMEM50B-205ENST00000459909 PROCA1Q8NCQ7 364 aaPredicted RBP20.68■□□□□ 0.9
TMEM50B-205ENST00000459909 TRIM32Q13049 653 aa20.67■□□□□ 0.9
TMEM50B-205ENST00000459909 SH3BP5LQ7L8J4 393 aa20.67■□□□□ 0.9
TMEM50B-205ENST00000459909 SALL1Q9NSC2 1324 aa20.67■□□□□ 0.9
TMEM50B-205ENST00000459909 POTEB2H3BUK9 544 aa20.66■□□□□ 0.9
TMEM50B-205ENST00000459909 GNL3LQ9NVN8 582 aaKnown RBP20.66■□□□□ 0.9
TMEM50B-205ENST00000459909 PFASO15067 1338 aa20.66■□□□□ 0.9
TMEM50B-205ENST00000459909 DDX60LQ5H9U9 1706 aaKnown RBP20.65■□□□□ 0.9
TMEM50B-205ENST00000459909 RFX7Q2KHR2 1363 aa20.65■□□□□ 0.9
TMEM50B-205ENST00000459909 DDTLA6NHG4 134 aaPredicted RBP20.65■□□□□ 0.9
TMEM50B-205ENST00000459909 EYA2O00167 538 aa20.65■□□□□ 0.9
TMEM50B-205ENST00000459909 PABPC4Q13310 644 aaKnown RBP eCLIP20.65■□□□□ 0.9
TMEM50B-205ENST00000459909 MAP3K21Q5TCX8 1036 aa20.65■□□□□ 0.9
TMEM50B-205ENST00000459909 GUCD1Q96NT3 240 aa20.65■□□□□ 0.9
TMEM50B-205ENST00000459909 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.65■□□□□ 0.9
TMEM50B-205ENST00000459909 GAKO14976 1311 aa20.64■□□□□ 0.89
TMEM50B-205ENST00000459909 CCDC84Q86UT8 332 aaPredicted RBP20.64■□□□□ 0.89
TMEM50B-205ENST00000459909 TRIB2Q92519 343 aa20.64■□□□□ 0.89
TMEM50B-205ENST00000459909 DENND2AQ9ULE3 1009 aa20.64■□□□□ 0.89
TMEM50B-205ENST00000459909 DOCK2Q92608 1830 aa20.64■□□□□ 0.89
TMEM50B-205ENST00000459909 PTPRFP10586 1907 aa20.63■□□□□ 0.89
TMEM50B-205ENST00000459909 TBC1D12O60347 775 aa20.63■□□□□ 0.89
TMEM50B-205ENST00000459909 SLURP2P0DP57 97 aa20.63■□□□□ 0.89
TMEM50B-205ENST00000459909 COL6A1P12109 1028 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms