RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 RPS12P25398 132 aaKnown RBP6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 LMOD1P29536 600 aaPredicted RBP6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 PPP4CP60510 307 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 HAND2P61296 217 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 NUCB2P80303 420 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 PPARAQ07869 468 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 TNFAIP1Q13829 316 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 KIAA0825Q8IV33 1275 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 LCORLQ8N3X6 602 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 FAM184AQ8NB25 1140 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 SPRYD3Q8NCJ5 442 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 TGFBRAP1Q8WUH2 860 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 C7orf43Q8WVR3 580 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 MTA3Q9BTC8 594 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 TBC1D2Q9BYX2 928 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 DHX36Q9H2U1 1008 aaKnown RBP6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 ZNF277Q9NRM2 450 aaPredicted RBP6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 USP40Q9NVE5 1235 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 SERPINA10Q9UK55 444 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 TAOK2Q9UL54 1235 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 SMC3Q9UQE7 1217 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 ATP6V1DQ9Y5K8 247 aa6.87□□□□□ -1.31
RNU1-88P-201ENST00000459274 FER1L6Q2WGJ9 1857 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 WDR19Q8NEZ3 1342 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 LTBP3Q9NS15 1303 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 LAMA4Q16363 1823 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 ECM29Q5VYK3 1845 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 WTIPA6NIX2 430 aaPredicted RBP6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 GSG1L2A8MUP6 293 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 USP17L12C9JPN9 530 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 USP17L21D6R901 530 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 IFIT3O14879 490 aaKnown RBP6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 RAD17O75943 681 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 CYP21A2P08686 494 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 TSPY3P0CV98 308 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 TSPY8P0CW00 308 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 CALM1P0DP23 149 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 CALM2P0DP24 149 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 CALM3P0DP25 149 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 LMNB1P20700 586 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 PTMSP20962 102 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 CRKP46108 304 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 SCNN1DP51172 638 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 AKAP17AQ02040 695 aaKnown RBP6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 PICALMQ13492 652 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 PPP2R5BQ15173 497 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 RSBN1LQ6PCB5 846 aaPredicted RBP6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 OLFM4Q6UX06 510 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 SDR42E1Q8WUS8 393 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 INTS4Q96HW7 963 aaKnown RBP6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 FHDC1Q9C0D6 1143 aaPredicted RBP6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 ALDH8A1Q9H2A2 487 aaPredicted RBP6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 CHMP5Q9NZZ3 219 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 SLC12A7Q9Y666 1083 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 GJA3Q9Y6H8 435 aa6.86□□□□□ -1.31
RNU1-88P-201ENST00000459274 PRC1O43663 620 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 VIL1P09327 827 aaKnown RBP6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 XBP1P17861 261 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 NCLP19338 710 aaKnown RBP6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 KCNA3P22001 575 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 PTGER2P43116 358 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 AK2P54819 239 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 DYNLL1P63167 89 aaKnown RBP6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 CTDSPL2Q05D32 466 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 TRIM29Q14134 588 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 WTAPQ15007 396 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 DIXDC1Q155Q3 683 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 SBK1Q52WX2 424 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 TMEM67Q5HYA8 995 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 Q6ZUG5 572 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 CATIPQ7Z7H3 387 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 CDAN1Q8IWY9 1227 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 TRIM22Q8IYM9 498 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 STK11IPQ8N1F8 1099 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 STAG1Q8WVM7 1258 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 WASF1Q92558 559 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 KCNB2Q92953 911 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 ZDHHC15Q96MV8 337 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 GBP4Q96PP9 640 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 CABP5Q9NP86 173 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 DCP1AQ9NPI6 582 aaPredicted RBP6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 SWAP70Q9UH65 585 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 CIZ1Q9ULV3 898 aaPredicted RBP6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 BRCA1P38398 1863 aaKnown RBP6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 NAV1Q8NEY1 1877 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 PSME4Q14997 1843 aa6.85□□□□□ -1.31
RNU1-88P-201ENST00000459274 LTBP1Q14766 1721 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 DICER1Q9UPY3 1922 aaKnown RBP6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 B4E1Z4 1266 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 H3BQV1 296 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 PSMD14O00487 310 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 KDM4AO75164 1064 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 KIF5BP33176 963 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 SLC4A3P48751 1232 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 HMGN5P82970 282 aaKnown RBP6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 GNL2Q13823 731 aaKnown RBP6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 ADCK5Q3MIX3 580 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 CFAP100Q494V2 611 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 SLFNL1Q499Z3 407 aa6.84□□□□□ -1.31
RNU1-88P-201ENST00000459274 DACT2Q5SW24 774 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms