RNA–Protein interactions for RNA: ENST00000458729.5

SEMA3C-205, Transcript of semaphorin 3C, human

TSL 2

Gene SEMA3C, Length 1,318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA3C-205	ENST00000458729	TGFBRAP1	Q8WUH2	860 aa		31.17	■■■□□ 2.58
SEMA3C-205	ENST00000458729	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	31.16	■■■□□ 2.58
SEMA3C-205	ENST00000458729	SSC5D	A1L4H1	1573 aa		31.15	■■■□□ 2.58
SEMA3C-205	ENST00000458729	TRIM6-TRIM34	B2RNG4	842 aa		31.15	■■■□□ 2.58
SEMA3C-205	ENST00000458729	PRKG1	Q13976	671 aa		31.15	■■■□□ 2.58
SEMA3C-205	ENST00000458729	MAP3K11	Q16584	847 aa		31.15	■■■□□ 2.58
SEMA3C-205	ENST00000458729	SLFNL1	Q499Z3	407 aa		31.15	■■■□□ 2.58
SEMA3C-205	ENST00000458729	APPBP2	Q92624	585 aa		31.15	■■■□□ 2.58
SEMA3C-205	ENST00000458729	CRNKL1	Q9BZJ0	848 aa	Known RBP	31.15	■■■□□ 2.58
SEMA3C-205	ENST00000458729	OSBPL5	Q9H0X9	879 aa	Predicted RBP	31.15	■■■□□ 2.58
SEMA3C-205	ENST00000458729	ANGEL1	Q9UNK9	670 aa	Known RBP	31.15	■■■□□ 2.58
SEMA3C-205	ENST00000458729	USP5	P45974	858 aa		31.14	■■■□□ 2.58
SEMA3C-205	ENST00000458729	DCAF15	Q66K64	600 aa		31.14	■■■□□ 2.58
SEMA3C-205	ENST00000458729	CHGB	P05060	677 aa		31.13	■■■□□ 2.57
SEMA3C-205	ENST00000458729	IREB2	P48200	963 aa	Known RBP	31.13	■■■□□ 2.57
SEMA3C-205	ENST00000458729	AIDA	Q96BJ3	306 aa		31.13	■■■□□ 2.57
SEMA3C-205	ENST00000458729	COL2A1	P02458	1487 aa	Predicted RBP	31.13	■■■□□ 2.57
SEMA3C-205	ENST00000458729	ATRNL1	Q5VV63	1379 aa		31.12	■■■□□ 2.57
SEMA3C-205	ENST00000458729	FLT1	P17948	1338 aa		31.12	■■■□□ 2.57
SEMA3C-205	ENST00000458729	UNCX	A6NJT0	531 aa		31.12	■■■□□ 2.57
SEMA3C-205	ENST00000458729	UBE2Q2L	H0YL09	131 aa		31.12	■■■□□ 2.57
SEMA3C-205	ENST00000458729	MBD4	O95243	580 aa		31.12	■■■□□ 2.57
SEMA3C-205	ENST00000458729	MOB2	Q70IA6	237 aa		31.12	■■■□□ 2.57
SEMA3C-205	ENST00000458729	SH3BP5L	Q7L8J4	393 aa		31.12	■■■□□ 2.57
SEMA3C-205	ENST00000458729	MAPKAPK5	Q8IW41	473 aa		31.12	■■■□□ 2.57
SEMA3C-205	ENST00000458729	LCORL	Q8N3X6	602 aa		31.12	■■■□□ 2.57
SEMA3C-205	ENST00000458729	RILPL2	Q969X0	211 aa		31.12	■■■□□ 2.57
SEMA3C-205	ENST00000458729	CSRNP1	Q96S65	589 aa		31.12	■■■□□ 2.57
SEMA3C-205	ENST00000458729	PUS7L	Q9H0K6	701 aa	Known RBP	31.12	■■■□□ 2.57
SEMA3C-205	ENST00000458729	DHX36	Q9H2U1	1008 aa	Known RBP	31.12	■■■□□ 2.57
SEMA3C-205	ENST00000458729	DDTL	A6NHG4	134 aa	Predicted RBP	31.11	■■■□□ 2.57
SEMA3C-205	ENST00000458729	USP2	O75604	605 aa	Predicted RBP	31.11	■■■□□ 2.57
SEMA3C-205	ENST00000458729	ARMT1	Q9H993	441 aa		31.11	■■■□□ 2.57
SEMA3C-205	ENST00000458729	MKRN1	Q9UHC7	482 aa	Known RBP	31.11	■■■□□ 2.57
SEMA3C-205	ENST00000458729	AK9	Q5TCS8	1911 aa		31.1	■■■□□ 2.57
SEMA3C-205	ENST00000458729	RGMB	Q6NW40	437 aa		31.1	■■■□□ 2.57
SEMA3C-205	ENST00000458729	DNAJC5G	Q8N7S2	189 aa		31.1	■■■□□ 2.57
SEMA3C-205	ENST00000458729	LDLRAD1	Q5T700	205 aa		31.09	■■■□□ 2.57
SEMA3C-205	ENST00000458729	TTC22	Q5TAA0	569 aa		31.09	■■■□□ 2.57
SEMA3C-205	ENST00000458729	OSBP2	Q969R2	916 aa		31.09	■■■□□ 2.57
SEMA3C-205	ENST00000458729	FZD1	Q9UP38	647 aa		31.09	■■■□□ 2.57
SEMA3C-205	ENST00000458729	ECE1	P42892	770 aa		31.08	■■■□□ 2.57
SEMA3C-205	ENST00000458729	ZMYM1	Q5SVZ6	1142 aa		31.08	■■■□□ 2.57
SEMA3C-205	ENST00000458729	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	31.08	■■■□□ 2.57
SEMA3C-205	ENST00000458729	ZNF341	Q9BYN7	854 aa		31.08	■■■□□ 2.57
SEMA3C-205	ENST00000458729	FOCAD	Q5VW36	1801 aa		31.07	■■■□□ 2.56
SEMA3C-205	ENST00000458729	MIGA2	Q7L4E1	593 aa		31.07	■■■□□ 2.56
SEMA3C-205	ENST00000458729	KLRG1	Q96E93	195 aa		31.07	■■■□□ 2.56
SEMA3C-205	ENST00000458729	CDK5RAP2	Q96SN8	1893 aa		31.07	■■■□□ 2.56
SEMA3C-205	ENST00000458729	ANKRD13A	Q8IZ07	590 aa		31.06	■■■□□ 2.56
SEMA3C-205	ENST00000458729	CCDC102A	Q96A19	550 aa		31.06	■■■□□ 2.56
SEMA3C-205	ENST00000458729	STRBP	Q96SI9	672 aa	Known RBP	31.06	■■■□□ 2.56
SEMA3C-205	ENST00000458729	ATP8A2	Q9NTI2	1148 aa		31.06	■■■□□ 2.56
SEMA3C-205	ENST00000458729	PI4KB	Q9UBF8	816 aa		31.06	■■■□□ 2.56
SEMA3C-205	ENST00000458729	ZNF157	P51786	506 aa	Predicted RBP	31.05	■■■□□ 2.56
SEMA3C-205	ENST00000458729	MAP3K10	Q02779	954 aa		31.05	■■■□□ 2.56
SEMA3C-205	ENST00000458729	TBC1D12	O60347	775 aa		31.04	■■■□□ 2.56
SEMA3C-205	ENST00000458729	HLA-DOA	P06340	250 aa		31.04	■■■□□ 2.56
SEMA3C-205	ENST00000458729	MAP3K9	P80192	1104 aa		31.04	■■■□□ 2.56
SEMA3C-205	ENST00000458729	CYP4F22	Q6NT55	531 aa		31.04	■■■□□ 2.56
SEMA3C-205	ENST00000458729	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	31.04	■■■□□ 2.56
SEMA3C-205	ENST00000458729	CAPNS2	Q96L46	248 aa		31.04	■■■□□ 2.56
SEMA3C-205	ENST00000458729	PALD1	Q9ULE6	856 aa		31.04	■■■□□ 2.56
SEMA3C-205	ENST00000458729	SLC4A4	Q9Y6R1	1079 aa		31.04	■■■□□ 2.56
SEMA3C-205	ENST00000458729	GPAA1	O43292	621 aa		31.03	■■■□□ 2.56
SEMA3C-205	ENST00000458729	GNAT2	P19087	354 aa		31.03	■■■□□ 2.56
SEMA3C-205	ENST00000458729	VEGFB	P49765	207 aa		31.03	■■■□□ 2.56
SEMA3C-205	ENST00000458729	SDR42E1	Q8WUS8	393 aa		31.03	■■■□□ 2.56
SEMA3C-205	ENST00000458729	DDRGK1	Q96HY6	314 aa		31.03	■■■□□ 2.56
SEMA3C-205	ENST00000458729	DCP1A	Q9NPI6	582 aa	Predicted RBP	31.03	■■■□□ 2.56
SEMA3C-205	ENST00000458729	HELLS	Q9NRZ9	838 aa		31.03	■■■□□ 2.56
SEMA3C-205	ENST00000458729	SAP30BP	Q9UHR5	308 aa	Known RBP	31.03	■■■□□ 2.56
SEMA3C-205	ENST00000458729	WDR33	Q9C0J8	1336 aa	Known RBP	31.03	■■■□□ 2.56
SEMA3C-205	ENST00000458729		M0R2C6	588 aa		31.02	■■■□□ 2.56
SEMA3C-205	ENST00000458729	HIP1	O00291	1037 aa		31.02	■■■□□ 2.56
SEMA3C-205	ENST00000458729	PRKAB2	O43741	272 aa		31.02	■■■□□ 2.56
SEMA3C-205	ENST00000458729	GSPT1	P15170	499 aa	Known RBP	31.02	■■■□□ 2.56
SEMA3C-205	ENST00000458729	TTC6	Q86TZ1	520 aa		31.02	■■■□□ 2.56
SEMA3C-205	ENST00000458729	FOXP4	Q8IVH2	680 aa	Predicted RBP	31.02	■■■□□ 2.56
SEMA3C-205	ENST00000458729	SLC10A4	Q96EP9	437 aa		31.02	■■■□□ 2.56
SEMA3C-205	ENST00000458729	WRNIP1	Q96S55	665 aa		31.02	■■■□□ 2.56
SEMA3C-205	ENST00000458729	HERC5	Q9UII4	1024 aa	Known RBP	31.02	■■■□□ 2.56
SEMA3C-205	ENST00000458729	ZNF112	Q9UJU3	913 aa		31.02	■■■□□ 2.56
SEMA3C-205	ENST00000458729	SDS	P20132	328 aa		31.01	■■■□□ 2.56
SEMA3C-205	ENST00000458729	MCM9	Q9NXL9	1143 aa		31.01	■■■□□ 2.56
SEMA3C-205	ENST00000458729	CSAD	Q9Y600	493 aa		31.01	■■■□□ 2.56
SEMA3C-205	ENST00000458729	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	31	■■■□□ 2.55
SEMA3C-205	ENST00000458729	SEC62	Q99442	399 aa	Known RBP	31	■■■□□ 2.55
SEMA3C-205	ENST00000458729	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	31	■■■□□ 2.55
SEMA3C-205	ENST00000458729	POLR3D	P05423	398 aa	Predicted RBP	30.99	■■■□□ 2.55
SEMA3C-205	ENST00000458729	SLC10A3	P09131	477 aa		30.99	■■■□□ 2.55
SEMA3C-205	ENST00000458729	GRM1	Q13255	1194 aa		30.99	■■■□□ 2.55
SEMA3C-205	ENST00000458729	MYH1	P12882	1939 aa		30.99	■■■□□ 2.55
SEMA3C-205	ENST00000458729	MCMDC2	Q4G0Z9	681 aa		30.98	■■■□□ 2.55
SEMA3C-205	ENST00000458729	GIMAP6	Q6P9H5	292 aa		30.98	■■■□□ 2.55
SEMA3C-205	ENST00000458729	METTL16	Q86W50	562 aa	Known RBP	30.98	■■■□□ 2.55
SEMA3C-205	ENST00000458729	RASAL3	Q86YV0	1011 aa		30.98	■■■□□ 2.55
SEMA3C-205	ENST00000458729	CLMN	Q96JQ2	1002 aa		30.98	■■■□□ 2.55
SEMA3C-205	ENST00000458729	TRIM34	Q9BYJ4	488 aa		30.98	■■■□□ 2.55
SEMA3C-205	ENST00000458729	NOG	Q13253	232 aa		30.98	■■■□□ 2.55

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms