RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 USP5P45974 858 aa20.19■□□□□ 0.82
TRIM39-211ENST00000458516 MFAP1P55081 439 aaKnown RBP20.19■□□□□ 0.82
TRIM39-211ENST00000458516 DCPSQ96C86 337 aaKnown RBP20.19■□□□□ 0.82
TRIM39-211ENST00000458516 EPB41L4AQ9HCS5 686 aaPredicted RBP20.19■□□□□ 0.82
TRIM39-211ENST00000458516 MKRN1Q9UHC7 482 aaKnown RBP20.19■□□□□ 0.82
TRIM39-211ENST00000458516 CLEC11AQ9Y240 323 aa20.19■□□□□ 0.82
TRIM39-211ENST00000458516 ENTPD3O75355 529 aa20.18■□□□□ 0.82
TRIM39-211ENST00000458516 HSPD1P10809 573 aaKnown RBP20.18■□□□□ 0.82
TRIM39-211ENST00000458516 TNFAIP1Q13829 316 aa20.18■□□□□ 0.82
TRIM39-211ENST00000458516 FAM83AQ86UY5 434 aa20.18■□□□□ 0.82
TRIM39-211ENST00000458516 ZFPM1Q8IX07 1006 aa20.18■□□□□ 0.82
TRIM39-211ENST00000458516 OSBPL5Q9H0X9 879 aaPredicted RBP20.18■□□□□ 0.82
TRIM39-211ENST00000458516 DCP1AQ9NPI6 582 aaPredicted RBP20.18■□□□□ 0.82
TRIM39-211ENST00000458516 ATP8A2Q9NTI2 1148 aa20.18■□□□□ 0.82
TRIM39-211ENST00000458516 RPAP1Q9BWH6 1393 aaPredicted RBP20.18■□□□□ 0.82
TRIM39-211ENST00000458516 PATL2C9JE40 543 aaKnown RBP20.17■□□□□ 0.82
TRIM39-211ENST00000458516 TCP10Q12799 353 aa20.17■□□□□ 0.82
TRIM39-211ENST00000458516 C8orf34Q49A92 452 aa20.17■□□□□ 0.82
TRIM39-211ENST00000458516 FAM151AQ8WW52 585 aa20.17■□□□□ 0.82
TRIM39-211ENST00000458516 TRPM7Q96QT4 1865 aa20.17■□□□□ 0.82
TRIM39-211ENST00000458516 ADM5C9JUS6 153 aa20.16■□□□□ 0.82
TRIM39-211ENST00000458516 TNNI2P48788 182 aa20.16■□□□□ 0.82
TRIM39-211ENST00000458516 RASA3Q14644 834 aa20.16■□□□□ 0.82
TRIM39-211ENST00000458516 MAP1SQ66K74 1059 aaPredicted RBP20.16■□□□□ 0.82
TRIM39-211ENST00000458516 SH3BP5LQ7L8J4 393 aa20.16■□□□□ 0.82
TRIM39-211ENST00000458516 KRT26Q7Z3Y9 468 aa20.16■□□□□ 0.82
TRIM39-211ENST00000458516 TMEM39BQ9GZU3 492 aa20.16■□□□□ 0.82
TRIM39-211ENST00000458516 DEFB129Q9H1M3 183 aa20.16■□□□□ 0.82
TRIM39-211ENST00000458516 ATRNL1Q5VV63 1379 aa20.16■□□□□ 0.82
TRIM39-211ENST00000458516 MYH8P13535 1937 aa20.15■□□□□ 0.82
TRIM39-211ENST00000458516 CHADLQ6NUI6 762 aa20.15■□□□□ 0.82
TRIM39-211ENST00000458516 GIMAP6Q6P9H5 292 aa20.15■□□□□ 0.82
TRIM39-211ENST00000458516 SULF1Q8IWU6 871 aa20.15■□□□□ 0.82
TRIM39-211ENST00000458516 CDAN1Q8IWY9 1227 aa20.15■□□□□ 0.82
TRIM39-211ENST00000458516 IFNL3Q8IZI9 196 aa20.15■□□□□ 0.82
TRIM39-211ENST00000458516 TEPSINQ96N21 525 aa20.15■□□□□ 0.82
TRIM39-211ENST00000458516 DSCC1Q9BVC3 393 aa20.15■□□□□ 0.82
TRIM39-211ENST00000458516 GLIS2Q9BZE0 524 aaPredicted RBP20.15■□□□□ 0.82
TRIM39-211ENST00000458516 SAP30BPQ9UHR5 308 aaKnown RBP20.15■□□□□ 0.82
TRIM39-211ENST00000458516 PPP2R3BQ9Y5P8 575 aa20.15■□□□□ 0.82
TRIM39-211ENST00000458516 DDTLA6NHG4 134 aaPredicted RBP20.14■□□□□ 0.81
TRIM39-211ENST00000458516 APPP05067 770 aa20.14■□□□□ 0.81
TRIM39-211ENST00000458516 PTH1RQ03431 593 aa20.14■□□□□ 0.81
TRIM39-211ENST00000458516 CDC37L1Q7L3B6 337 aa20.14■□□□□ 0.81
TRIM39-211ENST00000458516 USP48Q86UV5 1035 aa20.14■□□□□ 0.81
TRIM39-211ENST00000458516 LSG1Q9H089 658 aaKnown RBP20.14■□□□□ 0.81
TRIM39-211ENST00000458516 SSC5DA1L4H1 1573 aa20.13■□□□□ 0.81
TRIM39-211ENST00000458516 ZMYM6O95789 1325 aa20.13■□□□□ 0.81
TRIM39-211ENST00000458516 ALX1Q15699 326 aa20.13■□□□□ 0.81
TRIM39-211ENST00000458516 DLK2Q6UY11 383 aa20.13■□□□□ 0.81
TRIM39-211ENST00000458516 NACAP1Q9BZK3 213 aa20.13■□□□□ 0.81
TRIM39-211ENST00000458516 MCM9Q9NXL9 1143 aa20.13■□□□□ 0.81
TRIM39-211ENST00000458516 PALD1Q9ULE6 856 aa20.13■□□□□ 0.81
TRIM39-211ENST00000458516 TDO2P48775 406 aa20.12■□□□□ 0.81
TRIM39-211ENST00000458516 CTR9Q6PD62 1173 aa20.12■□□□□ 0.81
TRIM39-211ENST00000458516 DDRGK1Q96HY6 314 aa20.12■□□□□ 0.81
TRIM39-211ENST00000458516 NAPBQ9H115 298 aa20.12■□□□□ 0.81
TRIM39-211ENST00000458516 ANO2Q9NQ90 1003 aa20.12■□□□□ 0.81
TRIM39-211ENST00000458516 USP17L12C9JPN9 530 aa20.11■□□□□ 0.81
TRIM39-211ENST00000458516 USP17L21D6R901 530 aa20.11■□□□□ 0.81
TRIM39-211ENST00000458516 FGAP02671 866 aa20.11■□□□□ 0.81
TRIM39-211ENST00000458516 CYP2D6P10635 497 aa20.11■□□□□ 0.81
TRIM39-211ENST00000458516 EVX2Q03828 476 aa20.11■□□□□ 0.81
TRIM39-211ENST00000458516 SLC4A8Q2Y0W8 1093 aa20.11■□□□□ 0.81
TRIM39-211ENST00000458516 SBK1Q52WX2 424 aa20.11■□□□□ 0.81
TRIM39-211ENST00000458516 PRAMEF18Q5VWM3 479 aa20.11■□□□□ 0.81
TRIM39-211ENST00000458516 KIAA1211Q6ZU35 1233 aa20.11■□□□□ 0.81
TRIM39-211ENST00000458516 ZSCAN29Q8IWY8 852 aaPredicted RBP20.11■□□□□ 0.81
TRIM39-211ENST00000458516 RBM46Q8TBY0 533 aaKnown RBP20.11■□□□□ 0.81
TRIM39-211ENST00000458516 MAP4K1Q92918 833 aa20.11■□□□□ 0.81
TRIM39-211ENST00000458516 CDCA5Q96FF9 252 aa20.11■□□□□ 0.81
TRIM39-211ENST00000458516 ARPP21Q9UBL0 812 aaPredicted RBP20.11■□□□□ 0.81
TRIM39-211ENST00000458516 PAPPA2Q9BXP8 1791 aa20.11■□□□□ 0.81
TRIM39-211ENST00000458516 CYP2D7A0A087X1C5 515 aa20.1■□□□□ 0.81
TRIM39-211ENST00000458516 TOMM70O94826 608 aa20.1■□□□□ 0.81
TRIM39-211ENST00000458516 NBPF12Q5TAG4 269 aaPredicted RBP20.1■□□□□ 0.81
TRIM39-211ENST00000458516 DHX36Q9H2U1 1008 aaKnown RBP20.1■□□□□ 0.81
TRIM39-211ENST00000458516 OTOFQ9HC10 1997 aa20.1■□□□□ 0.81
TRIM39-211ENST00000458516 SMIM22K7EJ46 135 aa20.09■□□□□ 0.81
TRIM39-211ENST00000458516 TRAF5O00463 557 aa20.09■□□□□ 0.81
TRIM39-211ENST00000458516 REC8O95072 547 aa20.09■□□□□ 0.81
TRIM39-211ENST00000458516 ITGBL1O95965 494 aaPredicted RBP20.09■□□□□ 0.81
TRIM39-211ENST00000458516 POLR3DP05423 398 aaPredicted RBP20.09■□□□□ 0.81
TRIM39-211ENST00000458516 PLCD1P51178 756 aa20.09■□□□□ 0.81
TRIM39-211ENST00000458516 FMR1Q06787 632 aaKnown RBP eCLIP20.09■□□□□ 0.81
TRIM39-211ENST00000458516 C12orf60Q5U649 245 aa20.09■□□□□ 0.81
TRIM39-211ENST00000458516 SMC1BQ8NDV3 1235 aa20.09■□□□□ 0.81
TRIM39-211ENST00000458516 CSRNP1Q96S65 589 aa20.09■□□□□ 0.81
TRIM39-211ENST00000458516 ROBO3Q96MS0 1386 aa20.08■□□□□ 0.81
TRIM39-211ENST00000458516 SEC24BO95487 1268 aa20.08■□□□□ 0.81
TRIM39-211ENST00000458516 HLA-DOAP06340 250 aa20.08■□□□□ 0.81
TRIM39-211ENST00000458516 TTC6Q86TZ1 520 aa20.08■□□□□ 0.81
TRIM39-211ENST00000458516 RBM8AQ9Y5S9 174 aaKnown RBP20.08■□□□□ 0.81
TRIM39-211ENST00000458516 U3KPZ7 1027 aaPredicted RBP20.08■□□□□ 0.81
TRIM39-211ENST00000458516 ATAD5Q96QE3 1844 aa20.08■□□□□ 0.8
TRIM39-211ENST00000458516 SLURP2P0DP57 97 aa20.07■□□□□ 0.8
TRIM39-211ENST00000458516 AMOTL1Q8IY63 956 aa20.07■□□□□ 0.8
TRIM39-211ENST00000458516 EHD4Q9H223 541 aa20.07■□□□□ 0.8
TRIM39-211ENST00000458516 DNAJC18Q9H819 358 aa20.07■□□□□ 0.8
TRIM39-211ENST00000458516 PI4KBQ9UBF8 816 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms