RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 CPLX1O14810 134 aa19.16■□□□□ 0.66
CAPN13-203ENST00000458085 LDHBP07195 334 aaKnown RBP19.16■□□□□ 0.66
CAPN13-203ENST00000458085 SRGNP10124 158 aa19.16■□□□□ 0.66
CAPN13-203ENST00000458085 LIFRP42702 1097 aa19.16■□□□□ 0.66
CAPN13-203ENST00000458085 DCP1AQ9NPI6 582 aaPredicted RBP19.16■□□□□ 0.66
CAPN13-203ENST00000458085 LRRC37AA6NMS7 1700 aa19.15■□□□□ 0.66
CAPN13-203ENST00000458085 PPEF1O14829 653 aaPredicted RBP19.15■□□□□ 0.66
CAPN13-203ENST00000458085 DHX16O60231 1041 aaKnown RBP19.15■□□□□ 0.66
CAPN13-203ENST00000458085 HMGB2P26583 209 aaKnown RBP19.15■□□□□ 0.66
CAPN13-203ENST00000458085 SPTY2D1Q68D10 685 aaPredicted RBP19.15■□□□□ 0.66
CAPN13-203ENST00000458085 RNF41Q9H4P4 317 aaPredicted RBP19.15■□□□□ 0.66
CAPN13-203ENST00000458085 KIF3AQ9Y496 699 aa19.15■□□□□ 0.66
CAPN13-203ENST00000458085 ZBTB43O43298 467 aa19.14■□□□□ 0.66
CAPN13-203ENST00000458085 PRDM1O75626 825 aa19.14■□□□□ 0.66
CAPN13-203ENST00000458085 ILDR1Q86SU0 546 aaPredicted RBP19.14■□□□□ 0.66
CAPN13-203ENST00000458085 CHMP4CQ96CF2 233 aa19.14■□□□□ 0.66
CAPN13-203ENST00000458085 ZSCAN16Q9H4T2 348 aaPredicted RBP19.14■□□□□ 0.66
CAPN13-203ENST00000458085 ANO8Q9HCE9 1232 aaPredicted RBP19.14■□□□□ 0.66
CAPN13-203ENST00000458085 DUOX1Q9NRD9 1551 aa19.14■□□□□ 0.65
CAPN13-203ENST00000458085 MYH15Q9Y2K3 1946 aa19.14■□□□□ 0.65
CAPN13-203ENST00000458085 CYP2D6P10635 497 aa19.14■□□□□ 0.65
CAPN13-203ENST00000458085 AIFM3Q96NN9 605 aa19.14■□□□□ 0.65
CAPN13-203ENST00000458085 CRNKL1Q9BZJ0 848 aaKnown RBP19.14■□□□□ 0.65
CAPN13-203ENST00000458085 FTOQ9C0B1 505 aaKnown RBP eCLIP19.14■□□□□ 0.65
CAPN13-203ENST00000458085 COL11A2P13942 1736 aaPredicted RBP19.14■□□□□ 0.65
CAPN13-203ENST00000458085 C6orf229H3BNL8 230 aa19.13■□□□□ 0.65
CAPN13-203ENST00000458085 IL1R1P14778 569 aa19.13■□□□□ 0.65
CAPN13-203ENST00000458085 CSPP1Q1MSJ5 1256 aa19.13■□□□□ 0.65
CAPN13-203ENST00000458085 GIMAP6Q6P9H5 292 aa19.13■□□□□ 0.65
CAPN13-203ENST00000458085 FLAD1Q8NFF5 587 aa19.13■□□□□ 0.65
CAPN13-203ENST00000458085 LEO1Q8WVC0 666 aaPredicted RBP19.13■□□□□ 0.65
CAPN13-203ENST00000458085 PHKBQ93100 1093 aa19.13■□□□□ 0.65
CAPN13-203ENST00000458085 GOLGA8AA7E2F4 631 aa19.13■□□□□ 0.65
CAPN13-203ENST00000458085 NTRK3Q16288 839 aa19.13■□□□□ 0.65
CAPN13-203ENST00000458085 LRSAM1Q6UWE0 723 aa19.13■□□□□ 0.65
CAPN13-203ENST00000458085 SP8Q8IXZ3 490 aa19.13■□□□□ 0.65
CAPN13-203ENST00000458085 SPATA32Q96LK8 384 aa19.13■□□□□ 0.65
CAPN13-203ENST00000458085 SLC12A7Q9Y666 1083 aa19.13■□□□□ 0.65
CAPN13-203ENST00000458085 KIAA1551Q9HCM1 1747 aa19.13■□□□□ 0.65
CAPN13-203ENST00000458085 ELP1O95163 1332 aa19.12■□□□□ 0.65
CAPN13-203ENST00000458085 CCDC69A6NI79 296 aa19.12■□□□□ 0.65
CAPN13-203ENST00000458085 UBE2Q2LH0YL09 131 aa19.12■□□□□ 0.65
CAPN13-203ENST00000458085 RANBP6O60518 1105 aaKnown RBP19.12■□□□□ 0.65
CAPN13-203ENST00000458085 WTAPQ15007 396 aa19.12■□□□□ 0.65
CAPN13-203ENST00000458085 EZH2Q15910 746 aaKnown RBP19.12■□□□□ 0.65
CAPN13-203ENST00000458085 SLC4A8Q2Y0W8 1093 aa19.12■□□□□ 0.65
CAPN13-203ENST00000458085 C8orf76Q96K31 380 aa19.12■□□□□ 0.65
CAPN13-203ENST00000458085 RBSNQ9H1K0 784 aa19.12■□□□□ 0.65
CAPN13-203ENST00000458085 ATP6V0A2Q9Y487 856 aa19.12■□□□□ 0.65
CAPN13-203ENST00000458085 PARP3Q9Y6F1 533 aa19.12■□□□□ 0.65
CAPN13-203ENST00000458085 SH3RF3Q8TEJ3 882 aaPredicted RBP19.12■□□□□ 0.65
CAPN13-203ENST00000458085 SCAND2PQ9GZW5 306 aaPredicted RBP19.12■□□□□ 0.65
CAPN13-203ENST00000458085 FGRP09769 529 aa19.11■□□□□ 0.65
CAPN13-203ENST00000458085 CEBPZQ03701 1054 aaKnown RBP19.11■□□□□ 0.65
CAPN13-203ENST00000458085 EN1Q05925 392 aaPredicted RBP19.11■□□□□ 0.65
CAPN13-203ENST00000458085 SEC23AQ15436 765 aa19.11■□□□□ 0.65
CAPN13-203ENST00000458085 ESR2Q92731 530 aa19.11■□□□□ 0.65
CAPN13-203ENST00000458085 ATP8A2Q9NTI2 1148 aa19.11■□□□□ 0.65
CAPN13-203ENST00000458085 TNKSO95271 1327 aa19.11■□□□□ 0.65
CAPN13-203ENST00000458085 LAMB1P07942 1786 aa19.11■□□□□ 0.65
CAPN13-203ENST00000458085 RIMBP2O15034 1052 aa19.11■□□□□ 0.65
CAPN13-203ENST00000458085 NPR1P16066 1061 aa19.11■□□□□ 0.65
CAPN13-203ENST00000458085 FBXO18Q8NFZ0 1043 aa19.11■□□□□ 0.65
CAPN13-203ENST00000458085 SYAP1Q96A49 352 aaPredicted RBP19.11■□□□□ 0.65
CAPN13-203ENST00000458085 ECM29Q5VYK3 1845 aa19.1■□□□□ 0.65
CAPN13-203ENST00000458085 USP17L8P0C7I0 530 aa19.1■□□□□ 0.65
CAPN13-203ENST00000458085 SART3Q15020 963 aaKnown RBP19.1■□□□□ 0.65
CAPN13-203ENST00000458085 PGBD1Q96JS3 809 aa19.1■□□□□ 0.65
CAPN13-203ENST00000458085 UBAC1Q9BSL1 405 aa19.1■□□□□ 0.65
CAPN13-203ENST00000458085 MKRN1Q9UHC7 482 aaKnown RBP19.1■□□□□ 0.65
CAPN13-203ENST00000458085 TAOK2Q9UL54 1235 aa19.1■□□□□ 0.65
CAPN13-203ENST00000458085 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.1■□□□□ 0.65
CAPN13-203ENST00000458085 LIG1P18858 919 aa19.09■□□□□ 0.65
CAPN13-203ENST00000458085 CCDC183Q5T5S1 534 aa19.09■□□□□ 0.65
CAPN13-203ENST00000458085 USP28Q96RU2 1077 aa19.09■□□□□ 0.65
CAPN13-203ENST00000458085 GOLGB1Q14789 3259 aaKnown RBP19.09■□□□□ 0.65
CAPN13-203ENST00000458085 ERICH2A1L162 156 aa19.09■□□□□ 0.65
CAPN13-203ENST00000458085 TMED8Q6PL24 325 aaPredicted RBP19.09■□□□□ 0.65
CAPN13-203ENST00000458085 TMC4Q7Z404 712 aa19.09■□□□□ 0.65
CAPN13-203ENST00000458085 ENAHQ8N8S7 591 aaPredicted RBP19.09■□□□□ 0.65
CAPN13-203ENST00000458085 RTFDC1Q9BY42 306 aaPredicted RBP19.09■□□□□ 0.65
CAPN13-203ENST00000458085 MCM9Q9NXL9 1143 aa19.09■□□□□ 0.65
CAPN13-203ENST00000458085 RGPD3A6NKT7 1758 aaPredicted RBP19.09■□□□□ 0.65
CAPN13-203ENST00000458085 RGPD4Q7Z3J3 1758 aa19.09■□□□□ 0.65
CAPN13-203ENST00000458085 KIF28PB7ZC32 967 aa19.08■□□□□ 0.65
CAPN13-203ENST00000458085 PDE6BP35913 854 aa19.08■□□□□ 0.65
CAPN13-203ENST00000458085 MFSD14BQ5SR56 506 aa19.08■□□□□ 0.65
CAPN13-203ENST00000458085 CMTR1Q8N1G2 835 aaKnown RBP19.08■□□□□ 0.65
CAPN13-203ENST00000458085 CAMKK2Q96RR4 588 aa19.08■□□□□ 0.65
CAPN13-203ENST00000458085 ALG1Q9BT22 464 aa19.08■□□□□ 0.65
CAPN13-203ENST00000458085 MTA3Q9BTC8 594 aa19.08■□□□□ 0.65
CAPN13-203ENST00000458085 MROH7-TTC4A0A0A0MT08 1334 aa19.08■□□□□ 0.64
CAPN13-203ENST00000458085 NID2Q14112 1375 aa19.08■□□□□ 0.64
CAPN13-203ENST00000458085 SBK1Q52WX2 424 aa19.08■□□□□ 0.64
CAPN13-203ENST00000458085 ZNF654Q8IZM8 581 aa19.08■□□□□ 0.64
CAPN13-203ENST00000458085 ZSCAN10Q96SZ4 725 aaPredicted RBP19.08■□□□□ 0.64
CAPN13-203ENST00000458085 NMT2O60551 498 aa19.07■□□□□ 0.64
CAPN13-203ENST00000458085 CDKL5O76039 1030 aa19.07■□□□□ 0.64
CAPN13-203ENST00000458085 SYNE3Q6ZMZ3 975 aa19.07■□□□□ 0.64
CAPN13-203ENST00000458085 NUP133Q8WUM0 1156 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms