RNA–Protein interactions for RNA: ENST00000456133.5

EPCAM-204, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 1,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-204ENST00000456133 PRDX5P30044 214 aa16.73■□□□□ 0.27
EPCAM-204ENST00000456133 FASTKD5Q7L8L6 764 aaKnown RBP16.73■□□□□ 0.27
EPCAM-204ENST00000456133 PRRT2Q7Z6L0 340 aaPredicted RBP16.73■□□□□ 0.27
EPCAM-204ENST00000456133 PHF20L1A8MW92 1017 aa16.72■□□□□ 0.27
EPCAM-204ENST00000456133 TNPO2O14787 897 aaKnown RBP16.72■□□□□ 0.27
EPCAM-204ENST00000456133 SCYL3Q8IZE3 742 aa16.72■□□□□ 0.27
EPCAM-204ENST00000456133 PXYLP1Q8TE99 480 aa16.72■□□□□ 0.27
EPCAM-204ENST00000456133 LAMA3Q16787 3333 aa16.72■□□□□ 0.27
EPCAM-204ENST00000456133 ATRNL1Q5VV63 1379 aa16.71■□□□□ 0.27
EPCAM-204ENST00000456133 PTPRAP18433 802 aa16.71■□□□□ 0.27
EPCAM-204ENST00000456133 IRF5Q13568 498 aa16.71■□□□□ 0.27
EPCAM-204ENST00000456133 LPIN2Q92539 896 aa16.71■□□□□ 0.27
EPCAM-204ENST00000456133 PAWRQ96IZ0 340 aaKnown RBP16.71■□□□□ 0.27
EPCAM-204ENST00000456133 MRS2Q9HD23 443 aa16.71■□□□□ 0.27
EPCAM-204ENST00000456133 PICK1Q9NRD5 415 aa16.71■□□□□ 0.27
EPCAM-204ENST00000456133 TAOK2Q9UL54 1235 aa16.71■□□□□ 0.27
EPCAM-204ENST00000456133 AFG3L2Q9Y4W6 797 aa16.71■□□□□ 0.27
EPCAM-204ENST00000456133 ATAD5Q96QE3 1844 aa16.71■□□□□ 0.26
EPCAM-204ENST00000456133 EYA2O00167 538 aa16.7■□□□□ 0.26
EPCAM-204ENST00000456133 LDHBP07195 334 aaKnown RBP16.7■□□□□ 0.26
EPCAM-204ENST00000456133 RGS3P49796 1198 aa16.7■□□□□ 0.26
EPCAM-204ENST00000456133 CRISPLD2Q9H0B8 497 aa16.7■□□□□ 0.26
EPCAM-204ENST00000456133 PAK6Q9NQU5 681 aaPredicted RBP16.7■□□□□ 0.26
EPCAM-204ENST00000456133 SLURP2P0DP57 97 aa16.7■□□□□ 0.26
EPCAM-204ENST00000456133 CAPN2P17655 700 aa16.7■□□□□ 0.26
EPCAM-204ENST00000456133 RFX5P48382 616 aaPredicted RBP16.7■□□□□ 0.26
EPCAM-204ENST00000456133 SMCR8Q8TEV9 937 aaPredicted RBP16.7■□□□□ 0.26
EPCAM-204ENST00000456133 SLC45A1Q9Y2W3 748 aa16.7■□□□□ 0.26
EPCAM-204ENST00000456133 CUL9Q8IWT3 2517 aa16.69■□□□□ 0.26
EPCAM-204ENST00000456133 SH3BP5LQ7L8J4 393 aa16.69■□□□□ 0.26
EPCAM-204ENST00000456133 DIS3LQ8TF46 1054 aaKnown RBP16.69■□□□□ 0.26
EPCAM-204ENST00000456133 USP44Q9H0E7 712 aa16.69■□□□□ 0.26
EPCAM-204ENST00000456133 LRRFIP2Q9Y608 721 aaKnown RBP16.69■□□□□ 0.26
EPCAM-204ENST00000456133 DDX60LQ5H9U9 1706 aaKnown RBP16.69■□□□□ 0.26
EPCAM-204ENST00000456133 ENTPD3O75355 529 aa16.68■□□□□ 0.26
EPCAM-204ENST00000456133 ATG9AQ7Z3C6 839 aa16.68■□□□□ 0.26
EPCAM-204ENST00000456133 NECAB2Q7Z6G3 386 aa16.68■□□□□ 0.26
EPCAM-204ENST00000456133 ZSCAN29Q8IWY8 852 aaPredicted RBP16.68■□□□□ 0.26
EPCAM-204ENST00000456133 MRPL50Q8N5N7 158 aaKnown RBP16.68■□□□□ 0.26
EPCAM-204ENST00000456133 COA7Q96BR5 231 aa16.68■□□□□ 0.26
EPCAM-204ENST00000456133 IDI2Q9BXS1 227 aa16.68■□□□□ 0.26
EPCAM-204ENST00000456133 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.68■□□□□ 0.26
EPCAM-204ENST00000456133 PLXNB2O15031 1838 aa16.68■□□□□ 0.26
EPCAM-204ENST00000456133 LOC285556D6RIA3 1793 aa16.67■□□□□ 0.26
EPCAM-204ENST00000456133 TRIM75PA6NK02 468 aa16.67■□□□□ 0.26
EPCAM-204ENST00000456133 CCDC84Q86UT8 332 aaPredicted RBP16.67■□□□□ 0.26
EPCAM-204ENST00000456133 C7orf61Q8IZ16 206 aa16.67■□□□□ 0.26
EPCAM-204ENST00000456133 ANKRD13CQ8N6S4 541 aa16.67■□□□□ 0.26
EPCAM-204ENST00000456133 GDF15Q99988 308 aa16.67■□□□□ 0.26
EPCAM-204ENST00000456133 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.67■□□□□ 0.26
EPCAM-204ENST00000456133 GNL3LQ9NVN8 582 aaKnown RBP16.67■□□□□ 0.26
EPCAM-204ENST00000456133 ZMYND8Q9ULU4 1186 aaPredicted RBP16.67■□□□□ 0.26
EPCAM-204ENST00000456133 DDTLA6NHG4 134 aaPredicted RBP16.66■□□□□ 0.26
EPCAM-204ENST00000456133 MAP3K10Q02779 954 aa16.66■□□□□ 0.26
EPCAM-204ENST00000456133 ATP2B3Q16720 1220 aa16.66■□□□□ 0.26
EPCAM-204ENST00000456133 SALL1Q9NSC2 1324 aa16.66■□□□□ 0.26
EPCAM-204ENST00000456133 RFX7Q2KHR2 1363 aa16.66■□□□□ 0.26
EPCAM-204ENST00000456133 BMP8BP34820 402 aa16.65■□□□□ 0.26
EPCAM-204ENST00000456133 PHKA1P46020 1223 aa16.65■□□□□ 0.26
EPCAM-204ENST00000456133 SIL1Q9H173 461 aa16.65■□□□□ 0.26
EPCAM-204ENST00000456133 DENND2AQ9ULE3 1009 aa16.65■□□□□ 0.26
EPCAM-204ENST00000456133 AGTPBP1Q9UPW5 1226 aa16.65■□□□□ 0.26
EPCAM-204ENST00000456133 CTNND1O60716 968 aaKnown RBP16.65■□□□□ 0.26
EPCAM-204ENST00000456133 MNX1P50219 401 aaPredicted RBP16.65■□□□□ 0.26
EPCAM-204ENST00000456133 TREML2Q5T2D2 321 aa16.65■□□□□ 0.26
EPCAM-204ENST00000456133 DDX4Q9NQI0 724 aaKnown RBP16.65■□□□□ 0.26
EPCAM-204ENST00000456133 GAKO14976 1311 aa16.65■□□□□ 0.26
EPCAM-204ENST00000456133 PICALMQ13492 652 aa16.64■□□□□ 0.25
EPCAM-204ENST00000456133 FAM110CQ1W6H9 321 aa16.64■□□□□ 0.25
EPCAM-204ENST00000456133 DEFB123Q8N688 67 aa16.64■□□□□ 0.25
EPCAM-204ENST00000456133 ANKLE1Q8NAG6 615 aa16.64■□□□□ 0.25
EPCAM-204ENST00000456133 CEP126Q9P2H0 1117 aa16.64■□□□□ 0.25
EPCAM-204ENST00000456133 PTPRCP08575 1304 aa16.64■□□□□ 0.25
EPCAM-204ENST00000456133 SEMA3EO15041 775 aa16.63■□□□□ 0.25
EPCAM-204ENST00000456133 Q7L0L9 218 aa16.63■□□□□ 0.25
EPCAM-204ENST00000456133 PNMA3Q9UL41 463 aa16.63■□□□□ 0.25
EPCAM-204ENST00000456133 HMGCRP04035 888 aa16.62■□□□□ 0.25
EPCAM-204ENST00000456133 SYN1P17600 705 aa16.62■□□□□ 0.25
EPCAM-204ENST00000456133 TRIM32Q13049 653 aa16.62■□□□□ 0.25
EPCAM-204ENST00000456133 GPR153Q6NV75 609 aa16.62■□□□□ 0.25
EPCAM-204ENST00000456133 DZIP1Q86YF9 867 aaKnown RBP16.62■□□□□ 0.25
EPCAM-204ENST00000456133 ZGPATQ8N5A5 531 aaKnown RBP16.62■□□□□ 0.25
EPCAM-204ENST00000456133 FAM196BA6NMK8 535 aa16.61■□□□□ 0.25
EPCAM-204ENST00000456133 ADORA1P30542 326 aa16.61■□□□□ 0.25
EPCAM-204ENST00000456133 BTDP43251 543 aa16.61■□□□□ 0.25
EPCAM-204ENST00000456133 PROCA1Q8NCQ7 364 aaPredicted RBP16.61■□□□□ 0.25
EPCAM-204ENST00000456133 NBPF3Q9H094 633 aa16.61■□□□□ 0.25
EPCAM-204ENST00000456133 HMX1Q9NP08 348 aaPredicted RBP16.61■□□□□ 0.25
EPCAM-204ENST00000456133 ABCF2Q9UG63 623 aa16.61■□□□□ 0.25
EPCAM-204ENST00000456133 RPTORQ8N122 1335 aa16.61■□□□□ 0.25
EPCAM-204ENST00000456133 CIAO1O76071 339 aa16.6■□□□□ 0.25
EPCAM-204ENST00000456133 MAGEA10P43363 369 aaPredicted RBP16.6■□□□□ 0.25
EPCAM-204ENST00000456133 SPP2Q13103 211 aa16.6■□□□□ 0.25
EPCAM-204ENST00000456133 FAM163AQ96GL9 167 aaPredicted RBP16.6■□□□□ 0.25
EPCAM-204ENST00000456133 FBXO3Q9UK99 471 aa16.6■□□□□ 0.25
EPCAM-204ENST00000456133 GJD2Q9UKL4 321 aa16.6■□□□□ 0.25
EPCAM-204ENST00000456133 GCLCP48506 637 aaPredicted RBP16.6■□□□□ 0.25
EPCAM-204ENST00000456133 LRIT3Q3SXY7 679 aa16.6■□□□□ 0.25
EPCAM-204ENST00000456133 CCDC102BQ68D86 513 aa16.6■□□□□ 0.25
EPCAM-204ENST00000456133 SLF2Q8IX21 1173 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms