RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 NPHP1O15259 732 aa10.99□□□□□ -0.65
LINC01940-201ENST00000455228 OPA1O60313 960 aa10.99□□□□□ -0.65
LINC01940-201ENST00000455228 SASH3O75995 380 aa10.99□□□□□ -0.65
LINC01940-201ENST00000455228 ARID5BQ14865 1188 aa10.99□□□□□ -0.65
LINC01940-201ENST00000455228 C1orf141Q5JVX7 400 aa10.99□□□□□ -0.65
LINC01940-201ENST00000455228 DPY19L2Q6NUT2 758 aa10.99□□□□□ -0.65
LINC01940-201ENST00000455228 Q6ZUG5 572 aa10.99□□□□□ -0.65
LINC01940-201ENST00000455228 CCDC125Q86Z20 511 aa10.99□□□□□ -0.65
LINC01940-201ENST00000455228 YIPF2Q9BWQ6 316 aa10.99□□□□□ -0.65
LINC01940-201ENST00000455228 SLC24A3Q9HC58 644 aa10.99□□□□□ -0.65
LINC01940-201ENST00000455228 BARX2Q9UMQ3 279 aaPredicted RBP10.99□□□□□ -0.65
LINC01940-201ENST00000455228 AGLP35573 1532 aa10.98□□□□□ -0.65
LINC01940-201ENST00000455228 CCDC69A6NI79 296 aa10.98□□□□□ -0.65
LINC01940-201ENST00000455228 ME1P48163 572 aa10.98□□□□□ -0.65
LINC01940-201ENST00000455228 SMC1AQ14683 1233 aaKnown RBP10.98□□□□□ -0.65
LINC01940-201ENST00000455228 C11orf57Q6ZUT1 292 aaPredicted RBP10.98□□□□□ -0.65
LINC01940-201ENST00000455228 EZH1Q92800 747 aaPredicted RBP10.98□□□□□ -0.65
LINC01940-201ENST00000455228 N4BP2L2Q92802 583 aaPredicted RBP10.98□□□□□ -0.65
LINC01940-201ENST00000455228 SUCLG2Q96I99 432 aa10.98□□□□□ -0.65
LINC01940-201ENST00000455228 LRRC2Q9BYS8 371 aa10.98□□□□□ -0.65
LINC01940-201ENST00000455228 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.98□□□□□ -0.65
LINC01940-201ENST00000455228 LRRC10BA6NIK2 292 aa10.98□□□□□ -0.65
LINC01940-201ENST00000455228 ERLIN2O94905 339 aa10.98□□□□□ -0.65
LINC01940-201ENST00000455228 MYL1P05976 194 aa10.98□□□□□ -0.65
LINC01940-201ENST00000455228 KCNJ6P48051 423 aa10.98□□□□□ -0.65
LINC01940-201ENST00000455228 MNAT1P51948 309 aa10.98□□□□□ -0.65
LINC01940-201ENST00000455228 SFMBT2Q5VUG0 894 aa10.98□□□□□ -0.65
LINC01940-201ENST00000455228 EDC3Q96F86 508 aaKnown RBP10.98□□□□□ -0.65
LINC01940-201ENST00000455228 MRFAP1L1Q96HT8 127 aa10.98□□□□□ -0.65
LINC01940-201ENST00000455228 NAT10Q9H0A0 1025 aaKnown RBP10.98□□□□□ -0.65
LINC01940-201ENST00000455228 ANO10Q9NW15 660 aa10.98□□□□□ -0.65
LINC01940-201ENST00000455228 FRMD4BQ9Y2L6 1034 aa10.98□□□□□ -0.65
LINC01940-201ENST00000455228 ADAMTS13Q76LX8 1427 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 PTPRUQ92729 1446 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 PES1O00541 588 aaKnown RBP10.97□□□□□ -0.65
LINC01940-201ENST00000455228 LIN7AO14910 233 aaPredicted RBP10.97□□□□□ -0.65
LINC01940-201ENST00000455228 FSBPO95073 299 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 HOXA10P31260 410 aaPredicted RBP10.97□□□□□ -0.65
LINC01940-201ENST00000455228 MAP3K9P80192 1104 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 RESTQ13127 1097 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 RC3H1Q5TC82 1133 aaKnown RBP10.97□□□□□ -0.65
LINC01940-201ENST00000455228 RIC3Q7Z5B4 369 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 POTEDQ86YR6 584 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 IQCF2Q8IXL9 164 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 CEP57L1Q8IYX8 460 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 LINS1Q8NG48 757 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 KLHDC4Q8TBB5 520 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 SLC35B4Q969S0 331 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 TEKT1Q969V4 418 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 SDF4Q9BRK5 362 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 ORC3Q9UBD5 711 aaPredicted RBP10.97□□□□□ -0.65
LINC01940-201ENST00000455228 USP27XA6NNY8 438 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 IPO5O00410 1097 aaKnown RBP10.97□□□□□ -0.65
LINC01940-201ENST00000455228 TPD52L2O43399 206 aaKnown RBP10.97□□□□□ -0.65
LINC01940-201ENST00000455228 PROSER3Q2NL68 480 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 CCDC158Q5M9N0 1113 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 GJC2Q5T442 439 aaPredicted RBP10.97□□□□□ -0.65
LINC01940-201ENST00000455228 MAMSTRQ6ZN01 415 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 SHOX2O60902 331 aaPredicted RBP10.97□□□□□ -0.65
LINC01940-201ENST00000455228 TAF5LO75529 589 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 ZBED6P86452 979 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 PARD3BQ8TEW8 1205 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 RMDN2Q96LZ7 410 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 PAGR1Q9BTK6 254 aa10.97□□□□□ -0.65
LINC01940-201ENST00000455228 ALDH8A1Q9H2A2 487 aaPredicted RBP10.97□□□□□ -0.65
LINC01940-201ENST00000455228 A0A1B0GUA9 196 aa10.96□□□□□ -0.65
LINC01940-201ENST00000455228 GIGYF1O75420 1035 aaPredicted RBP10.96□□□□□ -0.65
LINC01940-201ENST00000455228 PABPC4Q13310 644 aaKnown RBP eCLIP10.96□□□□□ -0.65
LINC01940-201ENST00000455228 SARM1Q6SZW1 724 aa10.96□□□□□ -0.65
LINC01940-201ENST00000455228 GET4Q7L5D6 327 aaPredicted RBP10.96□□□□□ -0.65
LINC01940-201ENST00000455228 TRIM42Q8IWZ5 723 aa10.96□□□□□ -0.65
LINC01940-201ENST00000455228 ELOA2Q8IYF1 753 aaPredicted RBP10.96□□□□□ -0.65
LINC01940-201ENST00000455228 FUT8Q9BYC5 575 aa10.96□□□□□ -0.65
LINC01940-201ENST00000455228 ATP6V0A4Q9HBG4 840 aa10.96□□□□□ -0.65
LINC01940-201ENST00000455228 PYGLP06737 847 aa10.96□□□□□ -0.66
LINC01940-201ENST00000455228 RDXP35241 583 aaKnown RBP10.96□□□□□ -0.66
LINC01940-201ENST00000455228 CABS1Q96KC9 395 aa10.96□□□□□ -0.66
LINC01940-201ENST00000455228 FMNL2Q96PY5 1086 aa10.96□□□□□ -0.66
LINC01940-201ENST00000455228 IRF2BPLQ9H1B7 796 aa10.96□□□□□ -0.66
LINC01940-201ENST00000455228 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.96□□□□□ -0.66
LINC01940-201ENST00000455228 CEMIPQ8WUJ3 1361 aa10.96□□□□□ -0.66
LINC01940-201ENST00000455228 A0A087WWV3 80 aa10.96□□□□□ -0.66
LINC01940-201ENST00000455228 PPFIA3O75145 1194 aa10.96□□□□□ -0.66
LINC01940-201ENST00000455228 GCLCP48506 637 aaPredicted RBP10.96□□□□□ -0.66
LINC01940-201ENST00000455228 AKAP4Q5JQC9 854 aa10.96□□□□□ -0.66
LINC01940-201ENST00000455228 FOXR1Q6PIV2 292 aa10.96□□□□□ -0.66
LINC01940-201ENST00000455228 AOPEPQ8N6M6 819 aa10.96□□□□□ -0.66
LINC01940-201ENST00000455228 FSIP1Q8NA03 581 aa10.96□□□□□ -0.66
LINC01940-201ENST00000455228 FAM81AQ8TBF8 368 aa10.96□□□□□ -0.66
LINC01940-201ENST00000455228 HNRNPLLQ8WVV9 542 aaKnown RBP10.96□□□□□ -0.66
LINC01940-201ENST00000455228 FTOQ9C0B1 505 aaKnown RBP eCLIP10.96□□□□□ -0.66
LINC01940-201ENST00000455228 ADGRL3Q9HAR2 1447 aa10.95□□□□□ -0.66
LINC01940-201ENST00000455228 LRRC37A3O60309 1634 aa10.95□□□□□ -0.66
LINC01940-201ENST00000455228 HARSP12081 509 aaKnown RBP10.95□□□□□ -0.66
LINC01940-201ENST00000455228 ARGLU1Q9NWB6 273 aaPredicted RBP10.95□□□□□ -0.66
LINC01940-201ENST00000455228 RGL1Q9NZL6 768 aa10.95□□□□□ -0.66
LINC01940-201ENST00000455228 RPL13P26373 211 aaKnown RBP10.95□□□□□ -0.66
LINC01940-201ENST00000455228 GSDMDP57764 484 aa10.95□□□□□ -0.66
LINC01940-201ENST00000455228 GUCY1B3Q02153 619 aa10.95□□□□□ -0.66
LINC01940-201ENST00000455228 PLCB4Q15147 1175 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms