RNA–Protein interactions for RNA: ENST00000454608.3

USP41-202, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS P5 TSL 5 BASIC

Gene USP41, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-202ENST00000454608 METTL24Q5JXM2 366 aa13.11□□□□□ -0.31
USP41-202ENST00000454608 CDC42EP5Q6NZY7 148 aa13.11□□□□□ -0.31
USP41-202ENST00000454608 GADL1Q6ZQY3 521 aa13.11□□□□□ -0.31
USP41-202ENST00000454608 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.11□□□□□ -0.31
USP41-202ENST00000454608 DIS3LQ8TF46 1054 aaKnown RBP13.11□□□□□ -0.31
USP41-202ENST00000454608 PRKRIP1Q9H875 184 aaPredicted RBP13.11□□□□□ -0.31
USP41-202ENST00000454608 TAOK2Q9UL54 1235 aa13.11□□□□□ -0.31
USP41-202ENST00000454608 AFG3L2Q9Y4W6 797 aa13.11□□□□□ -0.31
USP41-202ENST00000454608 ZHX2Q9Y6X8 837 aa13.11□□□□□ -0.31
USP41-202ENST00000454608 HMGCRP04035 888 aa13.1□□□□□ -0.31
USP41-202ENST00000454608 IFIT1P09914 478 aaKnown RBP13.1□□□□□ -0.31
USP41-202ENST00000454608 PTPRAP18433 802 aa13.1□□□□□ -0.31
USP41-202ENST00000454608 MAGEA10P43363 369 aaPredicted RBP13.1□□□□□ -0.31
USP41-202ENST00000454608 FAM110CQ1W6H9 321 aa13.1□□□□□ -0.31
USP41-202ENST00000454608 VGLL2Q8N8G2 317 aa13.1□□□□□ -0.31
USP41-202ENST00000454608 UBE2OQ9C0C9 1292 aaKnown RBP13.1□□□□□ -0.31
USP41-202ENST00000454608 HMX1Q9NP08 348 aaPredicted RBP13.1□□□□□ -0.31
USP41-202ENST00000454608 PNMA3Q9UL41 463 aa13.1□□□□□ -0.31
USP41-202ENST00000454608 RPTORQ8N122 1335 aa13.1□□□□□ -0.31
USP41-202ENST00000454608 UNC80Q8N2C7 3258 aa13.09□□□□□ -0.31
USP41-202ENST00000454608 PHF20L1A8MW92 1017 aa13.09□□□□□ -0.31
USP41-202ENST00000454608 NFIAQ12857 509 aa13.09□□□□□ -0.31
USP41-202ENST00000454608 FAM109BQ6ICB4 259 aaPredicted RBP13.09□□□□□ -0.31
USP41-202ENST00000454608 SRCIN1Q9C0H9 1055 aa13.09□□□□□ -0.31
USP41-202ENST00000454608 C11orf49Q9H6J7 331 aa13.09□□□□□ -0.31
USP41-202ENST00000454608 FAM198AQ9UFP1 575 aa13.09□□□□□ -0.31
USP41-202ENST00000454608 AGTPBP1Q9UPW5 1226 aa13.09□□□□□ -0.31
USP41-202ENST00000454608 DAGLAQ9Y4D2 1042 aa13.09□□□□□ -0.31
USP41-202ENST00000454608 MYH2Q9UKX2 1941 aa13.09□□□□□ -0.31
USP41-202ENST00000454608 FANCIQ9NVI1 1328 aa13.09□□□□□ -0.31
USP41-202ENST00000454608 ATRNL1Q5VV63 1379 aa13.08□□□□□ -0.31
USP41-202ENST00000454608 ENTPD3O75355 529 aa13.08□□□□□ -0.32
USP41-202ENST00000454608 SYN1P17600 705 aa13.08□□□□□ -0.32
USP41-202ENST00000454608 PUM3Q15397 648 aaKnown RBP13.08□□□□□ -0.32
USP41-202ENST00000454608 RABL6Q3YEC7 729 aaPredicted RBP13.08□□□□□ -0.32
USP41-202ENST00000454608 LRRC24Q50LG9 513 aa13.08□□□□□ -0.32
USP41-202ENST00000454608 ANKRD13CQ8N6S4 541 aa13.08□□□□□ -0.32
USP41-202ENST00000454608 KAZALD1Q96I82 304 aa13.08□□□□□ -0.32
USP41-202ENST00000454608 SUCLG2Q96I99 432 aa13.08□□□□□ -0.32
USP41-202ENST00000454608 USP40Q9NVE5 1235 aa13.08□□□□□ -0.32
USP41-202ENST00000454608 LRRFIP2Q9Y608 721 aaKnown RBP13.08□□□□□ -0.32
USP41-202ENST00000454608 LOC285556D6RIA3 1793 aa13.07□□□□□ -0.32
USP41-202ENST00000454608 CTNND1O60716 968 aaKnown RBP13.07□□□□□ -0.32
USP41-202ENST00000454608 FGFR2P21802 821 aa13.07□□□□□ -0.32
USP41-202ENST00000454608 GCLCP48506 637 aaPredicted RBP13.07□□□□□ -0.32
USP41-202ENST00000454608 MAP3K10Q02779 954 aa13.07□□□□□ -0.32
USP41-202ENST00000454608 IDI2Q9BXS1 227 aa13.07□□□□□ -0.32
USP41-202ENST00000454608 OGDHLQ9ULD0 1010 aa13.07□□□□□ -0.32
USP41-202ENST00000454608 UTYO14607 1347 aa13.07□□□□□ -0.32
USP41-202ENST00000454608 PLXNB2O15031 1838 aa13.06□□□□□ -0.32
USP41-202ENST00000454608 NBPF7P0C2Y1 421 aaPredicted RBP13.06□□□□□ -0.32
USP41-202ENST00000454608 DIXDC1Q155Q3 683 aa13.06□□□□□ -0.32
USP41-202ENST00000454608 SLC4A10Q6U841 1118 aa13.06□□□□□ -0.32
USP41-202ENST00000454608 PROCA1Q8NCQ7 364 aaPredicted RBP13.06□□□□□ -0.32
USP41-202ENST00000454608 ATAD5Q96QE3 1844 aa13.05□□□□□ -0.32
USP41-202ENST00000454608 POTEB2H3BUK9 544 aa13.05□□□□□ -0.32
USP41-202ENST00000454608 LDHBP07195 334 aaKnown RBP13.05□□□□□ -0.32
USP41-202ENST00000454608 SLC5A1P13866 664 aa13.05□□□□□ -0.32
USP41-202ENST00000454608 EXOSC9Q06265 439 aaKnown RBP13.05□□□□□ -0.32
USP41-202ENST00000454608 PABPC4Q13310 644 aaKnown RBP eCLIP13.05□□□□□ -0.32
USP41-202ENST00000454608 ZSCAN29Q8IWY8 852 aaPredicted RBP13.05□□□□□ -0.32
USP41-202ENST00000454608 LPIN2Q92539 896 aa13.05□□□□□ -0.32
USP41-202ENST00000454608 TBC1D2Q9BYX2 928 aa13.05□□□□□ -0.32
USP41-202ENST00000454608 BICC1Q9H694 974 aaKnown RBP13.05□□□□□ -0.32
USP41-202ENST00000454608 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
USP41-202ENST00000454608 GJD2Q9UKL4 321 aa13.05□□□□□ -0.32
USP41-202ENST00000454608 SALL1Q9NSC2 1324 aa13.05□□□□□ -0.32
USP41-202ENST00000454608 COL2A1P02458 1487 aaPredicted RBP13.04□□□□□ -0.32
USP41-202ENST00000454608 TRIM75PA6NK02 468 aa13.04□□□□□ -0.32
USP41-202ENST00000454608 PRDX5P30044 214 aa13.04□□□□□ -0.32
USP41-202ENST00000454608 RGS3P49796 1198 aa13.04□□□□□ -0.32
USP41-202ENST00000454608 WDR63Q8IWG1 891 aa13.04□□□□□ -0.32
USP41-202ENST00000454608 ZFPM1Q8IX07 1006 aa13.04□□□□□ -0.32
USP41-202ENST00000454608 TREML2Q5T2D2 321 aa13.03□□□□□ -0.32
USP41-202ENST00000454608 MAP3K21Q5TCX8 1036 aa13.03□□□□□ -0.32
USP41-202ENST00000454608 TRMT44Q8IYL2 757 aaKnown RBP13.03□□□□□ -0.32
USP41-202ENST00000454608 ANKRD44Q8N8A2 993 aa13.03□□□□□ -0.32
USP41-202ENST00000454608 GUCD1Q96NT3 240 aa13.03□□□□□ -0.32
USP41-202ENST00000454608 GNL3LQ9NVN8 582 aaKnown RBP13.03□□□□□ -0.32
USP41-202ENST00000454608 PFASO15067 1338 aa13.03□□□□□ -0.32
USP41-202ENST00000454608 SEMA3EO15041 775 aa13.02□□□□□ -0.33
USP41-202ENST00000454608 ZBTB22O15209 634 aa13.02□□□□□ -0.33
USP41-202ENST00000454608 TBC1D12O60347 775 aa13.02□□□□□ -0.33
USP41-202ENST00000454608 COL6A1P12109 1028 aa13.02□□□□□ -0.33
USP41-202ENST00000454608 XRCC5P13010 732 aaKnown RBP13.02□□□□□ -0.33
USP41-202ENST00000454608 TRIM32Q13049 653 aa13.02□□□□□ -0.33
USP41-202ENST00000454608 SLF2Q8IX21 1173 aa13.02□□□□□ -0.33
USP41-202ENST00000454608 ZGPATQ8N5A5 531 aaKnown RBP13.02□□□□□ -0.33
USP41-202ENST00000454608 TRIB2Q92519 343 aa13.02□□□□□ -0.33
USP41-202ENST00000454608 DENND2AQ9ULE3 1009 aa13.02□□□□□ -0.33
USP41-202ENST00000454608 RFX7Q2KHR2 1363 aa13.02□□□□□ -0.33
USP41-202ENST00000454608 FRMPD3Q5JV73 1810 aa13.02□□□□□ -0.33
USP41-202ENST00000454608 EYA2O00167 538 aa13.01□□□□□ -0.33
USP41-202ENST00000454608 ZNF697Q5TEC3 545 aa13.01□□□□□ -0.33
USP41-202ENST00000454608 SH3BP5LQ7L8J4 393 aa13.01□□□□□ -0.33
USP41-202ENST00000454608 KLHDC4Q8TBB5 520 aa13.01□□□□□ -0.33
USP41-202ENST00000454608 SOCS4Q8WXH5 440 aa13.01□□□□□ -0.33
USP41-202ENST00000454608 NUDT12Q9BQG2 462 aa13.01□□□□□ -0.33
USP41-202ENST00000454608 OSBPL5Q9H0X9 879 aaPredicted RBP13.01□□□□□ -0.33
USP41-202ENST00000454608 PRDM6Q9NQX0 595 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms