RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 MLANAQ16655 118 aa8.27□□□□□ -1.09
CUL3-208ENST00000454323 B4GALNT3Q6L9W6 998 aa8.27□□□□□ -1.09
CUL3-208ENST00000454323 GJD3Q8N144 294 aa8.27□□□□□ -1.09
CUL3-208ENST00000454323 CCER1Q8TC90 406 aaPredicted RBP8.27□□□□□ -1.09
CUL3-208ENST00000454323 PCOLCE2Q9UKZ9 415 aa8.27□□□□□ -1.09
CUL3-208ENST00000454323 PPP1R9AQ9ULJ8 1098 aa8.27□□□□□ -1.09
CUL3-208ENST00000454323 E9PSI1 815 aa8.26□□□□□ -1.09
CUL3-208ENST00000454323 ITPKAP23677 461 aa8.26□□□□□ -1.09
CUL3-208ENST00000454323 SPRED3Q2MJR0 410 aa8.26□□□□□ -1.09
CUL3-208ENST00000454323 RPS26P11Q5JNZ5 115 aaPredicted RBP8.26□□□□□ -1.09
CUL3-208ENST00000454323 KIAA0319Q5VV43 1072 aa8.26□□□□□ -1.09
CUL3-208ENST00000454323 KRT82Q9NSB4 513 aa8.26□□□□□ -1.09
CUL3-208ENST00000454323 OXCT1P55809 520 aa8.25□□□□□ -1.09
CUL3-208ENST00000454323 PHLDB3Q6NSJ2 640 aa8.25□□□□□ -1.09
CUL3-208ENST00000454323 TXNDC2Q86VQ3 553 aa8.25□□□□□ -1.09
CUL3-208ENST00000454323 LRRC56Q8IYG6 542 aaPredicted RBP8.25□□□□□ -1.09
CUL3-208ENST00000454323 FANCD2OSQ96PS1 177 aa8.25□□□□□ -1.09
CUL3-208ENST00000454323 GTF2IRD1Q9UHL9 959 aa8.25□□□□□ -1.09
CUL3-208ENST00000454323 KRTAP4-5Q9BYR2 181 aa8.24□□□□□ -1.09
CUL3-208ENST00000454323 EHD4Q9H223 541 aa8.24□□□□□ -1.09
CUL3-208ENST00000454323 SLAIN2Q9P270 581 aa8.24□□□□□ -1.09
CUL3-208ENST00000454323 NCANO14594 1321 aa8.24□□□□□ -1.09
CUL3-208ENST00000454323 PRRG2O14669 202 aa8.23□□□□□ -1.09
CUL3-208ENST00000454323 RNGTTO60942 597 aaKnown RBP8.23□□□□□ -1.09
CUL3-208ENST00000454323 ECEL1O95672 775 aa8.23□□□□□ -1.09
CUL3-208ENST00000454323 POLR3DP05423 398 aaPredicted RBP8.23□□□□□ -1.09
CUL3-208ENST00000454323 CFPP27918 469 aa8.23□□□□□ -1.09
CUL3-208ENST00000454323 IKZF1Q13422 519 aa8.23□□□□□ -1.09
CUL3-208ENST00000454323 DUSP23Q9BVJ7 150 aa8.23□□□□□ -1.09
CUL3-208ENST00000454323 TNKS2Q9H2K2 1166 aa8.23□□□□□ -1.09
CUL3-208ENST00000454323 NFIBO00712 420 aa8.22□□□□□ -1.09
CUL3-208ENST00000454323 MPZL3Q6UWV2 235 aa8.22□□□□□ -1.09
CUL3-208ENST00000454323 SSU72Q9NP77 194 aaKnown RBP8.22□□□□□ -1.09
CUL3-208ENST00000454323 B8ZZF3 427 aa8.21□□□□□ -1.1
CUL3-208ENST00000454323 FZD6O60353 706 aa8.21□□□□□ -1.1
CUL3-208ENST00000454323 ZNF865P0CJ78 1059 aaPredicted RBP8.21□□□□□ -1.1
CUL3-208ENST00000454323 ZSCAN22P10073 491 aaPredicted RBP8.21□□□□□ -1.1
CUL3-208ENST00000454323 CD96P40200 585 aa8.21□□□□□ -1.1
CUL3-208ENST00000454323 FKBP4Q02790 459 aaKnown RBP eCLIP8.21□□□□□ -1.1
CUL3-208ENST00000454323 ZP2Q05996 745 aa8.21□□□□□ -1.1
CUL3-208ENST00000454323 KIF4BQ2VIQ3 1234 aa8.21□□□□□ -1.1
CUL3-208ENST00000454323 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.21□□□□□ -1.1
CUL3-208ENST00000454323 ZNF503-AS2A6NEH8 195 aa8.2□□□□□ -1.1
CUL3-208ENST00000454323 IGF2BP3O00425 579 aaKnown RBP eCLIP8.2□□□□□ -1.1
CUL3-208ENST00000454323 GLI1P08151 1106 aa8.2□□□□□ -1.1
CUL3-208ENST00000454323 LIG1P18858 919 aa8.2□□□□□ -1.1
CUL3-208ENST00000454323 ITIH2P19823 946 aa8.2□□□□□ -1.1
CUL3-208ENST00000454323 SSFA2P28290 1259 aa8.2□□□□□ -1.1
CUL3-208ENST00000454323 SYDE1Q6ZW31 735 aaPredicted RBP8.2□□□□□ -1.1
CUL3-208ENST00000454323 CILP2Q8IUL8 1156 aa8.2□□□□□ -1.1
CUL3-208ENST00000454323 CCDC120Q96HB5 630 aa8.2□□□□□ -1.1
CUL3-208ENST00000454323 TRAK1Q9UPV9 953 aa8.2□□□□□ -1.1
CUL3-208ENST00000454323 KRTAP9-7A8MTY7 169 aa8.19□□□□□ -1.1
CUL3-208ENST00000454323 CLCN7P51798 805 aa8.19□□□□□ -1.1
CUL3-208ENST00000454323 PPP2R3AQ06190 1150 aa8.19□□□□□ -1.1
CUL3-208ENST00000454323 TTLL4Q14679 1199 aa8.19□□□□□ -1.1
CUL3-208ENST00000454323 CCDC86Q9H6F5 360 aaKnown RBP8.19□□□□□ -1.1
CUL3-208ENST00000454323 DISC1Q9NRI5 854 aa8.19□□□□□ -1.1
CUL3-208ENST00000454323 LMCD1Q9NZU5 365 aa8.19□□□□□ -1.1
CUL3-208ENST00000454323 PLAGL2Q9UPG8 496 aa8.19□□□□□ -1.1
CUL3-208ENST00000454323 CTNND2Q9UQB3 1225 aa8.19□□□□□ -1.1
CUL3-208ENST00000454323 MTMR3Q13615 1198 aa8.18□□□□□ -1.1
CUL3-208ENST00000454323 LCE5AQ5TCM9 118 aa8.18□□□□□ -1.1
CUL3-208ENST00000454323 PRPF40BQ6NWY9 871 aaKnown RBP8.18□□□□□ -1.1
CUL3-208ENST00000454323 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.18□□□□□ -1.1
CUL3-208ENST00000454323 TOP6BLQ8N6T0 577 aa8.18□□□□□ -1.1
CUL3-208ENST00000454323 FBXO15Q8NCQ5 510 aaPredicted RBP8.18□□□□□ -1.1
CUL3-208ENST00000454323 GNAT3A8MTJ3 354 aa8.17□□□□□ -1.1
CUL3-208ENST00000454323 GSTP1P09211 210 aaKnown RBP8.17□□□□□ -1.1
CUL3-208ENST00000454323 HCLS1P14317 486 aaPredicted RBP8.17□□□□□ -1.1
CUL3-208ENST00000454323 TMEM67Q5HYA8 995 aa8.17□□□□□ -1.1
CUL3-208ENST00000454323 C1QL4Q86Z23 238 aa8.17□□□□□ -1.1
CUL3-208ENST00000454323 KIRREL1Q96J84 757 aa8.17□□□□□ -1.1
CUL3-208ENST00000454323 CPNE3O75131 537 aaKnown RBP8.16□□□□□ -1.1
CUL3-208ENST00000454323 LEFTY1O75610 366 aa8.16□□□□□ -1.1
CUL3-208ENST00000454323 PDE3BQ13370 1112 aa8.16□□□□□ -1.1
CUL3-208ENST00000454323 TTLL10Q6ZVT0 673 aa8.16□□□□□ -1.1
CUL3-208ENST00000454323 CYFIP1Q7L576 1253 aa8.16□□□□□ -1.1
CUL3-208ENST00000454323 LIN37Q96GY3 246 aaPredicted RBP8.16□□□□□ -1.1
CUL3-208ENST00000454323 RBM47A0AV96 593 aaKnown RBP8.15□□□□□ -1.1
CUL3-208ENST00000454323 IGSF3O75054 1194 aa8.15□□□□□ -1.1
CUL3-208ENST00000454323 DNAJC14Q6Y2X3 702 aaPredicted RBP8.15□□□□□ -1.1
CUL3-208ENST00000454323 LCNL1Q6ZST4 164 aa8.15□□□□□ -1.1
CUL3-208ENST00000454323 AMIGO3Q86WK7 504 aa8.15□□□□□ -1.1
CUL3-208ENST00000454323 RNF214Q8ND24 703 aa8.15□□□□□ -1.1
CUL3-208ENST00000454323 CCDC87Q9NVE4 849 aa8.15□□□□□ -1.1
CUL3-208ENST00000454323 BRPF3Q9ULD4 1205 aa8.15□□□□□ -1.1
CUL3-208ENST00000454323 PCDHGC5Q9Y5F6 944 aa8.15□□□□□ -1.1
CUL3-208ENST00000454323 UNCXA6NJT0 531 aa8.14□□□□□ -1.11
CUL3-208ENST00000454323 ERVK-24P63145 666 aa8.14□□□□□ -1.11
CUL3-208ENST00000454323 PPP4R2Q9NY27 417 aa8.14□□□□□ -1.11
CUL3-208ENST00000454323 ZNF862O60290 1169 aa8.13□□□□□ -1.11
CUL3-208ENST00000454323 TMEM253P0C7T8 217 aa8.13□□□□□ -1.11
CUL3-208ENST00000454323 ERCC3P19447 782 aa8.13□□□□□ -1.11
CUL3-208ENST00000454323 WDR89Q96FK6 387 aaPredicted RBP8.13□□□□□ -1.11
CUL3-208ENST00000454323 ZC3H12CQ9C0D7 883 aaKnown RBP8.13□□□□□ -1.11
CUL3-208ENST00000454323 ABCB6Q9NP58 842 aa8.13□□□□□ -1.11
CUL3-208ENST00000454323 PRDM7Q9NQW5 492 aa8.13□□□□□ -1.11
CUL3-208ENST00000454323 U3KQE9 123 aa8.13□□□□□ -1.11
CUL3-208ENST00000454323 TMEM238LA0A1B0GVL6 79 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms