RNA–Protein interactions for RNA: ENST00000454252.1

CHEK2-220, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-220ENST00000454252 FAM196BA6NMK8 535 aa8.8□□□□□ -1
CHEK2-220ENST00000454252 EYA2O00167 538 aa8.8□□□□□ -1
CHEK2-220ENST00000454252 ADCY3O60266 1144 aa8.8□□□□□ -1
CHEK2-220ENST00000454252 PEX10O60683 326 aa8.8□□□□□ -1
CHEK2-220ENST00000454252 SLC5A1P13866 664 aa8.8□□□□□ -1
CHEK2-220ENST00000454252 PTPRAP18433 802 aa8.8□□□□□ -1
CHEK2-220ENST00000454252 PHKA1P46020 1223 aa8.8□□□□□ -1
CHEK2-220ENST00000454252 PRMT2P55345 433 aa8.8□□□□□ -1
CHEK2-220ENST00000454252 TREML2Q5T2D2 321 aa8.8□□□□□ -1
CHEK2-220ENST00000454252 GADL1Q6ZQY3 521 aa8.8□□□□□ -1
CHEK2-220ENST00000454252 PRRT2Q7Z6L0 340 aaPredicted RBP8.8□□□□□ -1
CHEK2-220ENST00000454252 SSH1Q8WYL5 1049 aa8.8□□□□□ -1
CHEK2-220ENST00000454252 LPIN2Q92539 896 aa8.8□□□□□ -1
CHEK2-220ENST00000454252 DEFB118Q96PH6 123 aa8.8□□□□□ -1
CHEK2-220ENST00000454252 STAP2Q9UGK3 403 aa8.8□□□□□ -1
CHEK2-220ENST00000454252 PA2G4Q9UQ80 394 aaKnown RBP8.8□□□□□ -1
CHEK2-220ENST00000454252 SUGT1Q9Y2Z0 365 aa8.8□□□□□ -1
CHEK2-220ENST00000454252 SGPL1O95470 568 aa8.79□□□□□ -1
CHEK2-220ENST00000454252 HOXD10P28358 340 aa8.79□□□□□ -1
CHEK2-220ENST00000454252 UBXN2AP68543 259 aa8.79□□□□□ -1
CHEK2-220ENST00000454252 TRIM32Q13049 653 aa8.79□□□□□ -1
CHEK2-220ENST00000454252 PICALMQ13492 652 aa8.79□□□□□ -1
CHEK2-220ENST00000454252 NCBP3Q53F19 620 aaKnown RBP8.79□□□□□ -1
CHEK2-220ENST00000454252 SCYL3Q8IZE3 742 aa8.79□□□□□ -1
CHEK2-220ENST00000454252 ANKRD13CQ8N6S4 541 aa8.79□□□□□ -1
CHEK2-220ENST00000454252 SLAIN1Q8ND83 568 aa8.79□□□□□ -1
CHEK2-220ENST00000454252 NKX2-3Q8TAU0 364 aa8.79□□□□□ -1
CHEK2-220ENST00000454252 WDR66Q8TBY9 1149 aa8.79□□□□□ -1
CHEK2-220ENST00000454252 HOOK2Q96ED9 719 aa8.79□□□□□ -1
CHEK2-220ENST00000454252 AFG3L2Q9Y4W6 797 aa8.79□□□□□ -1
CHEK2-220ENST00000454252 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.79□□□□□ -1
CHEK2-220ENST00000454252 VCANP13611 3396 aa8.78□□□□□ -1
CHEK2-220ENST00000454252 RFX7Q2KHR2 1363 aa8.78□□□□□ -1
CHEK2-220ENST00000454252 DLL1O00548 723 aa8.78□□□□□ -1
CHEK2-220ENST00000454252 TNPO2O14787 897 aaKnown RBP8.78□□□□□ -1
CHEK2-220ENST00000454252 EVI5O60447 810 aa8.78□□□□□ -1
CHEK2-220ENST00000454252 TFRCP02786 760 aaKnown RBP8.78□□□□□ -1
CHEK2-220ENST00000454252 LDHBP07195 334 aaKnown RBP8.78□□□□□ -1
CHEK2-220ENST00000454252 RRP1BQ14684 758 aaKnown RBP8.78□□□□□ -1
CHEK2-220ENST00000454252 ATP2B3Q16720 1220 aa8.78□□□□□ -1
CHEK2-220ENST00000454252 Q7L0L9 218 aa8.78□□□□□ -1
CHEK2-220ENST00000454252 SLC17A8Q8NDX2 589 aa8.78□□□□□ -1
CHEK2-220ENST00000454252 PAWRQ96IZ0 340 aaKnown RBP8.78□□□□□ -1
CHEK2-220ENST00000454252 HTATIP2Q9BUP3 242 aa8.78□□□□□ -1
CHEK2-220ENST00000454252 PICK1Q9NRD5 415 aa8.78□□□□□ -1
CHEK2-220ENST00000454252 ZMYND8Q9ULU4 1186 aaPredicted RBP8.78□□□□□ -1
CHEK2-220ENST00000454252 ZNF521Q96K83 1311 aa8.78□□□□□ -1
CHEK2-220ENST00000454252 KIF16BQ96L93 1317 aa8.78□□□□□ -1
CHEK2-220ENST00000454252 UNC80Q8N2C7 3258 aa8.78□□□□□ -1
CHEK2-220ENST00000454252 CXCL11O14625 94 aa8.77□□□□□ -1.01
CHEK2-220ENST00000454252 SYN1P17600 705 aa8.77□□□□□ -1.01
CHEK2-220ENST00000454252 RASGRF1Q13972 1273 aa8.77□□□□□ -1.01
CHEK2-220ENST00000454252 PI16Q6UXB8 463 aa8.77□□□□□ -1.01
CHEK2-220ENST00000454252 ZSCAN29Q8IWY8 852 aaPredicted RBP8.77□□□□□ -1.01
CHEK2-220ENST00000454252 C7orf61Q8IZ16 206 aa8.77□□□□□ -1.01
CHEK2-220ENST00000454252 SMCR8Q8TEV9 937 aaPredicted RBP8.77□□□□□ -1.01
CHEK2-220ENST00000454252 ZNF384Q8TF68 577 aa8.77□□□□□ -1.01
CHEK2-220ENST00000454252 YTHDC1Q96MU7 727 aaKnown RBP8.77□□□□□ -1.01
CHEK2-220ENST00000454252 PAK6Q9NQU5 681 aaPredicted RBP8.77□□□□□ -1.01
CHEK2-220ENST00000454252 NR2E3Q9Y5X4 410 aa8.77□□□□□ -1.01
CHEK2-220ENST00000454252 GAKO14976 1311 aa8.77□□□□□ -1.01
CHEK2-220ENST00000454252 BTDP43251 543 aa8.76□□□□□ -1.01
CHEK2-220ENST00000454252 MNX1P50219 401 aaPredicted RBP8.76□□□□□ -1.01
CHEK2-220ENST00000454252 TIMM10P62072 90 aa8.76□□□□□ -1.01
CHEK2-220ENST00000454252 SHROOM1Q2M3G4 852 aaPredicted RBP8.76□□□□□ -1.01
CHEK2-220ENST00000454252 CCDC102BQ68D86 513 aa8.76□□□□□ -1.01
CHEK2-220ENST00000454252 FASTKD5Q7L8L6 764 aaKnown RBP8.76□□□□□ -1.01
CHEK2-220ENST00000454252 IDI2Q9BXS1 227 aa8.76□□□□□ -1.01
CHEK2-220ENST00000454252 ABCF2Q9UG63 623 aa8.76□□□□□ -1.01
CHEK2-220ENST00000454252 LRRFIP2Q9Y608 721 aaKnown RBP8.76□□□□□ -1.01
CHEK2-220ENST00000454252 PTPRCP08575 1304 aa8.76□□□□□ -1.01
CHEK2-220ENST00000454252 EYSQ5T1H1 3165 aa8.75□□□□□ -1.01
CHEK2-220ENST00000454252 ENTPD3O75355 529 aa8.75□□□□□ -1.01
CHEK2-220ENST00000454252 HMGCS2P54868 508 aa8.75□□□□□ -1.01
CHEK2-220ENST00000454252 RHBDL3P58872 404 aa8.75□□□□□ -1.01
CHEK2-220ENST00000454252 JAG1P78504 1218 aa8.75□□□□□ -1.01
CHEK2-220ENST00000454252 HNRNPUQ00839 825 aaKnown RBP eCLIP8.75□□□□□ -1.01
CHEK2-220ENST00000454252 TBC1D9Q6ZT07 1266 aa8.75□□□□□ -1.01
CHEK2-220ENST00000454252 DZIP1Q86YF9 867 aaKnown RBP8.75□□□□□ -1.01
CHEK2-220ENST00000454252 CDCA7LQ96GN5 454 aa8.75□□□□□ -1.01
CHEK2-220ENST00000454252 CRISPLD2Q9H0B8 497 aa8.75□□□□□ -1.01
CHEK2-220ENST00000454252 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.75□□□□□ -1.01
CHEK2-220ENST00000454252 CEP126Q9P2H0 1117 aa8.75□□□□□ -1.01
CHEK2-220ENST00000454252 DENND2AQ9ULE3 1009 aa8.75□□□□□ -1.01
CHEK2-220ENST00000454252 AGTPBP1Q9UPW5 1226 aa8.75□□□□□ -1.01
CHEK2-220ENST00000454252 LAMA2P24043 3122 aaKnown RBP8.75□□□□□ -1.01
CHEK2-220ENST00000454252 SALL1Q9NSC2 1324 aa8.75□□□□□ -1.01
CHEK2-220ENST00000454252 MAP3K10Q02779 954 aa8.74□□□□□ -1.01
CHEK2-220ENST00000454252 MECOMQ03112 1051 aa8.74□□□□□ -1.01
CHEK2-220ENST00000454252 SPP2Q13103 211 aa8.74□□□□□ -1.01
CHEK2-220ENST00000454252 IRF5Q13568 498 aa8.74□□□□□ -1.01
CHEK2-220ENST00000454252 PXYLP1Q8TE99 480 aa8.74□□□□□ -1.01
CHEK2-220ENST00000454252 MEIS3Q99687 375 aa8.74□□□□□ -1.01
CHEK2-220ENST00000454252 GDF15Q99988 308 aa8.74□□□□□ -1.01
CHEK2-220ENST00000454252 GNL3LQ9NVN8 582 aaKnown RBP8.74□□□□□ -1.01
CHEK2-220ENST00000454252 MROH7-TTC4A0A0A0MT08 1334 aa8.74□□□□□ -1.01
CHEK2-220ENST00000454252 SPTBN5Q9NRC6 3674 aaKnown RBP8.73□□□□□ -1.01
CHEK2-220ENST00000454252 CTNND1O60716 968 aaKnown RBP8.73□□□□□ -1.01
CHEK2-220ENST00000454252 CIAO1O76071 339 aa8.73□□□□□ -1.01
CHEK2-220ENST00000454252 UBTFL1P0CB47 393 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms