RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 TGFBRAP1Q8WUH2 860 aa14.28□□□□□ -0.12
LINC00339-205ENST00000452322 SCAF8Q9UPN6 1271 aaKnown RBP14.28□□□□□ -0.12
LINC00339-205ENST00000452322 FLT1P17948 1338 aa14.28□□□□□ -0.12
LINC00339-205ENST00000452322 CDC45O75419 566 aa14.27□□□□□ -0.12
LINC00339-205ENST00000452322 ITGBL1O95965 494 aaPredicted RBP14.27□□□□□ -0.12
LINC00339-205ENST00000452322 MFAP1P55081 439 aaKnown RBP14.27□□□□□ -0.12
LINC00339-205ENST00000452322 TCP10Q12799 353 aa14.27□□□□□ -0.12
LINC00339-205ENST00000452322 USP48Q86UV5 1035 aa14.27□□□□□ -0.12
LINC00339-205ENST00000452322 MAPKAPK5Q8IW41 473 aa14.27□□□□□ -0.12
LINC00339-205ENST00000452322 RUFY2Q8WXA3 655 aa14.27□□□□□ -0.12
LINC00339-205ENST00000452322 OSBPL5Q9H0X9 879 aaPredicted RBP14.27□□□□□ -0.12
LINC00339-205ENST00000452322 ATP8A2Q9NTI2 1148 aa14.27□□□□□ -0.12
LINC00339-205ENST00000452322 SLC4A4Q9Y6R1 1079 aa14.27□□□□□ -0.12
LINC00339-205ENST00000452322 DDX60LQ5H9U9 1706 aaKnown RBP14.27□□□□□ -0.13
LINC00339-205ENST00000452322 NAV1Q8NEY1 1877 aa14.27□□□□□ -0.13
LINC00339-205ENST00000452322 CCDC171Q6TFL3 1326 aa14.27□□□□□ -0.13
LINC00339-205ENST00000452322 ATRNL1Q5VV63 1379 aa14.26□□□□□ -0.13
LINC00339-205ENST00000452322 PRKAB2O43741 272 aa14.26□□□□□ -0.13
LINC00339-205ENST00000452322 CASC1Q6TDU7 716 aa14.26□□□□□ -0.13
LINC00339-205ENST00000452322 CCDC129Q6ZRS4 1044 aa14.26□□□□□ -0.13
LINC00339-205ENST00000452322 ZNF589Q86UQ0 364 aaPredicted RBP14.26□□□□□ -0.13
LINC00339-205ENST00000452322 SDR42E1Q8WUS8 393 aa14.26□□□□□ -0.13
LINC00339-205ENST00000452322 TMEM39BQ9GZU3 492 aa14.26□□□□□ -0.13
LINC00339-205ENST00000452322 MKRN1Q9UHC7 482 aaKnown RBP14.26□□□□□ -0.13
LINC00339-205ENST00000452322 GIMAP6Q6P9H5 292 aa14.25□□□□□ -0.13
LINC00339-205ENST00000452322 ZFPM1Q8IX07 1006 aa14.25□□□□□ -0.13
LINC00339-205ENST00000452322 CDCA5Q96FF9 252 aa14.25□□□□□ -0.13
LINC00339-205ENST00000452322 DDRGK1Q96HY6 314 aa14.25□□□□□ -0.13
LINC00339-205ENST00000452322 TEPSINQ96N21 525 aa14.25□□□□□ -0.13
LINC00339-205ENST00000452322 DCP1AQ9NPI6 582 aaPredicted RBP14.25□□□□□ -0.13
LINC00339-205ENST00000452322 PASKQ96RG2 1323 aa14.25□□□□□ -0.13
LINC00339-205ENST00000452322 GSG1L2A8MUP6 293 aa14.24□□□□□ -0.13
LINC00339-205ENST00000452322 PATL2C9JE40 543 aaKnown RBP14.24□□□□□ -0.13
LINC00339-205ENST00000452322 TRAF5O00463 557 aa14.24□□□□□ -0.13
LINC00339-205ENST00000452322 SGSM2O43147 1006 aa14.24□□□□□ -0.13
LINC00339-205ENST00000452322 IL25Q9H293 177 aa14.24□□□□□ -0.13
LINC00339-205ENST00000452322 DHX36Q9H2U1 1008 aaKnown RBP14.24□□□□□ -0.13
LINC00339-205ENST00000452322 MYH1P12882 1939 aa14.24□□□□□ -0.13
LINC00339-205ENST00000452322 DDTLA6NHG4 134 aaPredicted RBP14.23□□□□□ -0.13
LINC00339-205ENST00000452322 NF2P35240 595 aa14.23□□□□□ -0.13
LINC00339-205ENST00000452322 SUPT20HL1Q3ZLR7 823 aa14.23□□□□□ -0.13
LINC00339-205ENST00000452322 NBPF12Q5TAG4 269 aaPredicted RBP14.23□□□□□ -0.13
LINC00339-205ENST00000452322 PRAMEF18Q5VWM3 479 aa14.23□□□□□ -0.13
LINC00339-205ENST00000452322 DLK2Q6UY11 383 aa14.23□□□□□ -0.13
LINC00339-205ENST00000452322 SH3BP5LQ7L8J4 393 aa14.23□□□□□ -0.13
LINC00339-205ENST00000452322 ZSCAN29Q8IWY8 852 aaPredicted RBP14.23□□□□□ -0.13
LINC00339-205ENST00000452322 CDAN1Q8IWY9 1227 aa14.23□□□□□ -0.13
LINC00339-205ENST00000452322 HOOK2Q96ED9 719 aa14.23□□□□□ -0.13
LINC00339-205ENST00000452322 CSRNP1Q96S65 589 aa14.23□□□□□ -0.13
LINC00339-205ENST00000452322 ESYT1Q9BSJ8 1104 aa14.23□□□□□ -0.13
LINC00339-205ENST00000452322 NACAP1Q9BZK3 213 aa14.23□□□□□ -0.13
LINC00339-205ENST00000452322 EPB41L4AQ9HCS5 686 aaPredicted RBP14.23□□□□□ -0.13
LINC00339-205ENST00000452322 MCM9Q9NXL9 1143 aa14.23□□□□□ -0.13
LINC00339-205ENST00000452322 SSC5DA1L4H1 1573 aa14.23□□□□□ -0.13
LINC00339-205ENST00000452322 TRPM7Q96QT4 1865 aa14.23□□□□□ -0.13
LINC00339-205ENST00000452322 FOXP2O15409 715 aa14.22□□□□□ -0.13
LINC00339-205ENST00000452322 APPP05067 770 aa14.22□□□□□ -0.13
LINC00339-205ENST00000452322 HSPD1P10809 573 aaKnown RBP14.22□□□□□ -0.13
LINC00339-205ENST00000452322 VPS53Q5VIR6 699 aa14.22□□□□□ -0.13
LINC00339-205ENST00000452322 IFNL3Q8IZI9 196 aa14.22□□□□□ -0.13
LINC00339-205ENST00000452322 ARPP21Q9UBL0 812 aaPredicted RBP14.22□□□□□ -0.13
LINC00339-205ENST00000452322 SAP30BPQ9UHR5 308 aaKnown RBP14.22□□□□□ -0.13
LINC00339-205ENST00000452322 PALD1Q9ULE6 856 aa14.22□□□□□ -0.13
LINC00339-205ENST00000452322 BAZ2AQ9UIF9 1905 aaKnown RBP14.22□□□□□ -0.13
LINC00339-205ENST00000452322 HLA-DOAP06340 250 aa14.22□□□□□ -0.13
LINC00339-205ENST00000452322 TDO2P48775 406 aa14.22□□□□□ -0.13
LINC00339-205ENST00000452322 FMR1Q06787 632 aaKnown RBP eCLIP14.22□□□□□ -0.13
LINC00339-205ENST00000452322 TTC6Q86TZ1 520 aa14.22□□□□□ -0.13
LINC00339-205ENST00000452322 AMOTL1Q8IY63 956 aa14.22□□□□□ -0.13
LINC00339-205ENST00000452322 DSCC1Q9BVC3 393 aa14.22□□□□□ -0.13
LINC00339-205ENST00000452322 NAPBQ9H115 298 aa14.22□□□□□ -0.13
LINC00339-205ENST00000452322 PI4KBQ9UBF8 816 aa14.22□□□□□ -0.13
LINC00339-205ENST00000452322 ZMYM6O95789 1325 aa14.21□□□□□ -0.13
LINC00339-205ENST00000452322 LAMB1P07942 1786 aa14.21□□□□□ -0.14
LINC00339-205ENST00000452322 SIPA1L1O43166 1804 aa14.21□□□□□ -0.14
LINC00339-205ENST00000452322 USP17L12C9JPN9 530 aa14.21□□□□□ -0.14
LINC00339-205ENST00000452322 USP17L21D6R901 530 aa14.21□□□□□ -0.14
LINC00339-205ENST00000452322 CELF2O95319 508 aaKnown RBP14.21□□□□□ -0.14
LINC00339-205ENST00000452322 POLR3DP05423 398 aaPredicted RBP14.21□□□□□ -0.14
LINC00339-205ENST00000452322 ALX1Q15699 326 aa14.21□□□□□ -0.14
LINC00339-205ENST00000452322 SBK1Q52WX2 424 aa14.21□□□□□ -0.14
LINC00339-205ENST00000452322 DCAF15Q66K64 600 aa14.21□□□□□ -0.14
LINC00339-205ENST00000452322 EHD4Q9H223 541 aa14.21□□□□□ -0.14
LINC00339-205ENST00000452322 ZNF408Q9H9D4 720 aa14.21□□□□□ -0.14
LINC00339-205ENST00000452322 PAPPA2Q9BXP8 1791 aa14.2□□□□□ -0.14
LINC00339-205ENST00000452322 PPP1R12BO60237 982 aaPredicted RBP14.2□□□□□ -0.14
LINC00339-205ENST00000452322 TBC1D12O60347 775 aa14.2□□□□□ -0.14
LINC00339-205ENST00000452322 PLCD1P51178 756 aa14.2□□□□□ -0.14
LINC00339-205ENST00000452322 FKBP1BP68106 108 aa14.2□□□□□ -0.14
LINC00339-205ENST00000452322 MAP3K10Q02779 954 aa14.2□□□□□ -0.14
LINC00339-205ENST00000452322 C12orf60Q5U649 245 aa14.2□□□□□ -0.14
LINC00339-205ENST00000452322 CTR9Q6PD62 1173 aa14.2□□□□□ -0.14
LINC00339-205ENST00000452322 METTL16Q86W50 562 aaKnown RBP14.2□□□□□ -0.14
LINC00339-205ENST00000452322 FOXP4Q8IVH2 680 aaPredicted RBP14.2□□□□□ -0.14
LINC00339-205ENST00000452322 HERC5Q9UII4 1024 aaKnown RBP14.2□□□□□ -0.14
LINC00339-205ENST00000452322 TAOK2Q9UL54 1235 aa14.2□□□□□ -0.14
LINC00339-205ENST00000452322 FGAP02671 866 aa14.19□□□□□ -0.14
LINC00339-205ENST00000452322 SLC4A8Q2Y0W8 1093 aa14.19□□□□□ -0.14
LINC00339-205ENST00000452322 CST9Q5W186 159 aa14.19□□□□□ -0.14
LINC00339-205ENST00000452322 KIAA1211Q6ZU35 1233 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms