RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.8□□□□□ -1.16
USP46-202ENST00000451218 FAM205AQ6ZU69 1335 aa7.8□□□□□ -1.16
USP46-202ENST00000451218 PKN1Q16512 942 aa7.8□□□□□ -1.16
USP46-202ENST00000451218 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.8□□□□□ -1.16
USP46-202ENST00000451218 GOLPH3LQ9H4A5 285 aa7.8□□□□□ -1.16
USP46-202ENST00000451218 XDHP47989 1333 aa7.79□□□□□ -1.16
USP46-202ENST00000451218 CYP2D6P10635 497 aa7.79□□□□□ -1.16
USP46-202ENST00000451218 LIFRP42702 1097 aa7.79□□□□□ -1.16
USP46-202ENST00000451218 GBP4Q96PP9 640 aa7.79□□□□□ -1.16
USP46-202ENST00000451218 MAP3K14Q99558 947 aa7.79□□□□□ -1.16
USP46-202ENST00000451218 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.79□□□□□ -1.16
USP46-202ENST00000451218 WDR90Q96KV7 1748 aa7.79□□□□□ -1.16
USP46-202ENST00000451218 WNT7AO00755 349 aa7.79□□□□□ -1.16
USP46-202ENST00000451218 ZNF772Q68DY9 489 aaPredicted RBP7.79□□□□□ -1.16
USP46-202ENST00000451218 ENGASEQ8NFI3 743 aa7.79□□□□□ -1.16
USP46-202ENST00000451218 SMCHD1A6NHR9 2005 aa7.79□□□□□ -1.16
USP46-202ENST00000451218 AKNAD1Q5T1N1 836 aa7.79□□□□□ -1.16
USP46-202ENST00000451218 TNFRSF25Q93038 417 aa7.79□□□□□ -1.16
USP46-202ENST00000451218 PPFIA3O75145 1194 aa7.79□□□□□ -1.16
USP46-202ENST00000451218 VEGFAP15692 232 aaPredicted RBP7.79□□□□□ -1.16
USP46-202ENST00000451218 PPARAQ07869 468 aa7.79□□□□□ -1.16
USP46-202ENST00000451218 WASHC4Q2M389 1173 aa7.79□□□□□ -1.16
USP46-202ENST00000451218 SBK1Q52WX2 424 aa7.79□□□□□ -1.16
USP46-202ENST00000451218 PDLIM2Q96JY6 352 aa7.79□□□□□ -1.16
USP46-202ENST00000451218 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.79□□□□□ -1.16
USP46-202ENST00000451218 KCNQ5Q9NR82 932 aa7.79□□□□□ -1.16
USP46-202ENST00000451218 LEMD3Q9Y2U8 911 aa7.79□□□□□ -1.16
USP46-202ENST00000451218 PPP4CP60510 307 aa7.78□□□□□ -1.16
USP46-202ENST00000451218 CCT2P78371 535 aaKnown RBP7.78□□□□□ -1.16
USP46-202ENST00000451218 NAA16Q6N069 864 aaPredicted RBP7.78□□□□□ -1.16
USP46-202ENST00000451218 ENAHQ8N8S7 591 aaPredicted RBP7.78□□□□□ -1.16
USP46-202ENST00000451218 GZF1Q9H116 711 aaPredicted RBP7.78□□□□□ -1.16
USP46-202ENST00000451218 A0A0G2JS52 829 aa7.78□□□□□ -1.16
USP46-202ENST00000451218 LIG1P18858 919 aa7.78□□□□□ -1.16
USP46-202ENST00000451218 TROAPQ12815 778 aa7.78□□□□□ -1.16
USP46-202ENST00000451218 IMMTQ16891 758 aaKnown RBP7.78□□□□□ -1.16
USP46-202ENST00000451218 GIMAP6Q6P9H5 292 aa7.78□□□□□ -1.16
USP46-202ENST00000451218 FAM163AQ96GL9 167 aaPredicted RBP7.78□□□□□ -1.16
USP46-202ENST00000451218 CD209Q9NNX6 404 aa7.78□□□□□ -1.16
USP46-202ENST00000451218 ANGEL1Q9UNK9 670 aaKnown RBP7.78□□□□□ -1.16
USP46-202ENST00000451218 PLIN4Q96Q06 1357 aa7.78□□□□□ -1.16
USP46-202ENST00000451218 MROH7-TTC4A0A0A0MT08 1334 aa7.78□□□□□ -1.16
USP46-202ENST00000451218 NMT2O60551 498 aa7.78□□□□□ -1.16
USP46-202ENST00000451218 HIBADHP31937 336 aaKnown RBP7.78□□□□□ -1.16
USP46-202ENST00000451218 EZH2Q15910 746 aaKnown RBP7.78□□□□□ -1.16
USP46-202ENST00000451218 ZSCAN25Q6NSZ9 544 aa7.78□□□□□ -1.16
USP46-202ENST00000451218 NCOA7Q8NI08 942 aa7.78□□□□□ -1.16
USP46-202ENST00000451218 SH3RF3Q8TEJ3 882 aaPredicted RBP7.78□□□□□ -1.16
USP46-202ENST00000451218 ANKRD2Q9GZV1 360 aa7.78□□□□□ -1.16
USP46-202ENST00000451218 SMC3Q9UQE7 1217 aa7.78□□□□□ -1.16
USP46-202ENST00000451218 JAG2Q9Y219 1238 aa7.78□□□□□ -1.16
USP46-202ENST00000451218 ATP6V0A2Q9Y487 856 aa7.78□□□□□ -1.16
USP46-202ENST00000451218 MYH7BA7E2Y1 1941 aa7.77□□□□□ -1.16
USP46-202ENST00000451218 M0R2N6 131 aa7.77□□□□□ -1.16
USP46-202ENST00000451218 ZNF213O14771 459 aa7.77□□□□□ -1.16
USP46-202ENST00000451218 MCM5P33992 734 aa7.77□□□□□ -1.16
USP46-202ENST00000451218 PTPAQ15257 358 aa7.77□□□□□ -1.16
USP46-202ENST00000451218 RASGRP2Q7LDG7 609 aa7.77□□□□□ -1.16
USP46-202ENST00000451218 RAB11FIP4Q86YS3 637 aa7.77□□□□□ -1.16
USP46-202ENST00000451218 LEO1Q8WVC0 666 aaPredicted RBP7.77□□□□□ -1.16
USP46-202ENST00000451218 MYL10Q9BUA6 226 aa7.77□□□□□ -1.16
USP46-202ENST00000451218 TOB1P50616 345 aaPredicted RBP7.77□□□□□ -1.17
USP46-202ENST00000451218 MAP3K12Q12852 859 aa7.77□□□□□ -1.17
USP46-202ENST00000451218 DIXDC1Q155Q3 683 aa7.77□□□□□ -1.17
USP46-202ENST00000451218 EARS2Q5JPH6 523 aaKnown RBP7.77□□□□□ -1.17
USP46-202ENST00000451218 MTA3Q9BTC8 594 aa7.77□□□□□ -1.17
USP46-202ENST00000451218 PCDHAC2Q9Y5I4 1007 aa7.77□□□□□ -1.17
USP46-202ENST00000451218 SLC4A4Q9Y6R1 1079 aa7.77□□□□□ -1.17
USP46-202ENST00000451218 LCTP09848 1927 aa7.77□□□□□ -1.17
USP46-202ENST00000451218 STK36Q9NRP7 1315 aa7.77□□□□□ -1.17
USP46-202ENST00000451218 ORC4O43929 436 aa7.77□□□□□ -1.17
USP46-202ENST00000451218 RXRAP19793 462 aa7.77□□□□□ -1.17
USP46-202ENST00000451218 OTUD7BQ6GQQ9 843 aa7.77□□□□□ -1.17
USP46-202ENST00000451218 CAVIN1Q6NZI2 390 aaKnown RBP7.77□□□□□ -1.17
USP46-202ENST00000451218 ARID3AQ99856 593 aa7.77□□□□□ -1.17
USP46-202ENST00000451218 GPR75-ASB3A0A0A6YYF3 556 aa7.77□□□□□ -1.17
USP46-202ENST00000451218 EDIL3O43854 480 aa7.77□□□□□ -1.17
USP46-202ENST00000451218 HSP90B1P14625 803 aaKnown RBP7.77□□□□□ -1.17
USP46-202ENST00000451218 CYP7A1P22680 504 aa7.77□□□□□ -1.17
USP46-202ENST00000451218 U2AF2P26368 475 aaKnown RBP eCLIP7.77□□□□□ -1.17
USP46-202ENST00000451218 GABPAQ06546 454 aa7.77□□□□□ -1.17
USP46-202ENST00000451218 SP8Q8IXZ3 490 aa7.77□□□□□ -1.17
USP46-202ENST00000451218 GRPEL1Q9HAV7 217 aa7.77□□□□□ -1.17
USP46-202ENST00000451218 PLCD1P51178 756 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 AXDND1Q5T1B0 1012 aaPredicted RBP7.76□□□□□ -1.17
USP46-202ENST00000451218 GORABQ5T7V8 394 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 MXD3Q9BW11 206 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 CTNNA3Q9UI47 895 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 OTOFQ9HC10 1997 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 IGKV6D-41A0A0C4DH26 115 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 KLF18A0A0U1RQI7 1052 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 KDM4AO75164 1064 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 KIF23Q02241 960 aaPredicted RBP7.76□□□□□ -1.17
USP46-202ENST00000451218 SKOR2Q2VWA4 1001 aaPredicted RBP7.76□□□□□ -1.17
USP46-202ENST00000451218 FERMT3Q86UX7 667 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 ANKS1AQ92625 1134 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 AIDAQ96BJ3 306 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 DDX4Q9NQI0 724 aaKnown RBP7.76□□□□□ -1.17
USP46-202ENST00000451218 RCOR1Q9UKL0 485 aa7.76□□□□□ -1.17
USP46-202ENST00000451218 ATRNL1Q5VV63 1379 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms