RNA–Protein interactions for RNA: ENST00000449844.6

NPAS1-202, Transcript of neuronal PAS domain protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPAS1, Length 2,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-202ENST00000449844 KRT23Q9C075 422 aa25.36■■□□□ 1.65
NPAS1-202ENST00000449844 CCDC88AQ3V6T2 1871 aa25.36■■□□□ 1.65
NPAS1-202ENST00000449844 CTAGE5O15320 804 aa25.36■■□□□ 1.65
NPAS1-202ENST00000449844 HOXA10P31260 410 aaPredicted RBP25.36■■□□□ 1.65
NPAS1-202ENST00000449844 LIFRP42702 1097 aa25.36■■□□□ 1.65
NPAS1-202ENST00000449844 CHAF1AQ13111 956 aaPredicted RBP25.36■■□□□ 1.65
NPAS1-202ENST00000449844 CCAR1Q8IX12 1150 aaKnown RBP25.36■■□□□ 1.65
NPAS1-202ENST00000449844 FTOQ9C0B1 505 aaKnown RBP eCLIP25.36■■□□□ 1.65
NPAS1-202ENST00000449844 SLC4A4Q9Y6R1 1079 aa25.36■■□□□ 1.65
NPAS1-202ENST00000449844 KLRG2A4D1S0 409 aaPredicted RBP25.35■■□□□ 1.65
NPAS1-202ENST00000449844 GPSM2P81274 684 aa25.35■■□□□ 1.65
NPAS1-202ENST00000449844 AKNAD1Q5T1N1 836 aa25.35■■□□□ 1.65
NPAS1-202ENST00000449844 CRAMP1Q96RY5 1269 aa25.35■■□□□ 1.65
NPAS1-202ENST00000449844 MAGEB6P1A0A0J9YX57 407 aa25.34■■□□□ 1.65
NPAS1-202ENST00000449844 BBOX1O75936 387 aa25.34■■□□□ 1.65
NPAS1-202ENST00000449844 SASS6Q6UVJ0 657 aa25.34■■□□□ 1.65
NPAS1-202ENST00000449844 CCDC73Q6ZRK6 1079 aa25.34■■□□□ 1.65
NPAS1-202ENST00000449844 ADGRA1Q86SQ6 560 aa25.34■■□□□ 1.65
NPAS1-202ENST00000449844 RAB11FIP4Q86YS3 637 aa25.34■■□□□ 1.65
NPAS1-202ENST00000449844 NKX2-3Q8TAU0 364 aa25.34■■□□□ 1.65
NPAS1-202ENST00000449844 STAG1Q8WVM7 1258 aa25.34■■□□□ 1.65
NPAS1-202ENST00000449844 LY9Q9HBG7 655 aa25.34■■□□□ 1.65
NPAS1-202ENST00000449844 ZBTB22O15209 634 aa25.34■■□□□ 1.65
NPAS1-202ENST00000449844 TMEM67Q5HYA8 995 aa25.34■■□□□ 1.65
NPAS1-202ENST00000449844 MTA3Q9BTC8 594 aa25.34■■□□□ 1.65
NPAS1-202ENST00000449844 LRRC37AA6NMS7 1700 aa25.33■■□□□ 1.65
NPAS1-202ENST00000449844 PRKAB2O43741 272 aa25.33■■□□□ 1.65
NPAS1-202ENST00000449844 CAVIN2O95810 425 aa25.33■■□□□ 1.65
NPAS1-202ENST00000449844 ZBTB43O43298 467 aa25.32■■□□□ 1.64
NPAS1-202ENST00000449844 YEATS4O95619 227 aa25.32■■□□□ 1.64
NPAS1-202ENST00000449844 ATP2B4P23634 1241 aa25.32■■□□□ 1.64
NPAS1-202ENST00000449844 TDO2P48775 406 aa25.32■■□□□ 1.64
NPAS1-202ENST00000449844 CTDSPL2Q05D32 466 aa25.32■■□□□ 1.64
NPAS1-202ENST00000449844 OTUD7BQ6GQQ9 843 aa25.32■■□□□ 1.64
NPAS1-202ENST00000449844 MFSD6Q6ZSS7 791 aa25.32■■□□□ 1.64
NPAS1-202ENST00000449844 ZNF804AQ7Z570 1209 aa25.32■■□□□ 1.64
NPAS1-202ENST00000449844 BRIP1Q9BX63 1249 aa25.32■■□□□ 1.64
NPAS1-202ENST00000449844 POLR3EQ9NVU0 708 aa25.32■■□□□ 1.64
NPAS1-202ENST00000449844 OFD1O75665 1012 aa25.32■■□□□ 1.64
NPAS1-202ENST00000449844 UFL1O94874 794 aa25.32■■□□□ 1.64
NPAS1-202ENST00000449844 ME1P48163 572 aa25.32■■□□□ 1.64
NPAS1-202ENST00000449844 NFXL1Q6ZNB6 911 aa25.32■■□□□ 1.64
NPAS1-202ENST00000449844 GGA1Q9UJY5 639 aa25.32■■□□□ 1.64
NPAS1-202ENST00000449844 PARP3Q9Y6F1 533 aa25.32■■□□□ 1.64
NPAS1-202ENST00000449844 MMP10P09238 476 aa25.31■■□□□ 1.64
NPAS1-202ENST00000449844 FAM160A1Q05DH4 1040 aa25.31■■□□□ 1.64
NPAS1-202ENST00000449844 ANO6Q4KMQ2 910 aa25.31■■□□□ 1.64
NPAS1-202ENST00000449844 MYSM1Q5VVJ2 828 aa25.31■■□□□ 1.64
NPAS1-202ENST00000449844 C15orf52Q6ZUT6 534 aaKnown RBP25.31■■□□□ 1.64
NPAS1-202ENST00000449844 LINC00301Q8NCQ3 95 aa25.31■■□□□ 1.64
NPAS1-202ENST00000449844 KCNG4Q8TDN1 519 aa25.31■■□□□ 1.64
NPAS1-202ENST00000449844 GOLPH3LQ9H4A5 285 aa25.31■■□□□ 1.64
NPAS1-202ENST00000449844 ZSWIM5Q9P217 1185 aa25.31■■□□□ 1.64
NPAS1-202ENST00000449844 A0A1W2PQ27 194 aa25.3■■□□□ 1.64
NPAS1-202ENST00000449844 A0A1W2PQ64 194 aa25.3■■□□□ 1.64
NPAS1-202ENST00000449844 A0A1W2PQD8 194 aa25.3■■□□□ 1.64
NPAS1-202ENST00000449844 KIF23Q02241 960 aaPredicted RBP25.3■■□□□ 1.64
NPAS1-202ENST00000449844 ADALQ6DHV7 355 aa25.3■■□□□ 1.64
NPAS1-202ENST00000449844 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.3■■□□□ 1.64
NPAS1-202ENST00000449844 ENGASEQ8NFI3 743 aa25.3■■□□□ 1.64
NPAS1-202ENST00000449844 NAP1L5Q96NT1 182 aaPredicted RBP25.3■■□□□ 1.64
NPAS1-202ENST00000449844 RNF41Q9H4P4 317 aaPredicted RBP25.3■■□□□ 1.64
NPAS1-202ENST00000449844 NID2Q14112 1375 aa25.3■■□□□ 1.64
NPAS1-202ENST00000449844 GOLGA8AA7E2F4 631 aa25.3■■□□□ 1.64
NPAS1-202ENST00000449844 IFIT3O14879 490 aaKnown RBP25.3■■□□□ 1.64
NPAS1-202ENST00000449844 SNW1Q13573 536 aaKnown RBP25.3■■□□□ 1.64
NPAS1-202ENST00000449844 TMC4Q7Z404 712 aa25.3■■□□□ 1.64
NPAS1-202ENST00000449844 NSUN4Q96CB9 384 aaKnown RBP25.3■■□□□ 1.64
NPAS1-202ENST00000449844 GPR101Q96P66 508 aaPredicted RBP25.3■■□□□ 1.64
NPAS1-202ENST00000449844 ALG1Q9BT22 464 aa25.3■■□□□ 1.64
NPAS1-202ENST00000449844 CDC27P30260 824 aa25.29■■□□□ 1.64
NPAS1-202ENST00000449844 MECOMQ03112 1051 aa25.29■■□□□ 1.64
NPAS1-202ENST00000449844 MSL1Q68DK7 614 aa25.29■■□□□ 1.64
NPAS1-202ENST00000449844 RIOK1Q9BRS2 568 aaKnown RBP25.29■■□□□ 1.64
NPAS1-202ENST00000449844 CBX8Q9HC52 389 aa25.29■■□□□ 1.64
NPAS1-202ENST00000449844 SENP2Q9HC62 589 aa25.29■■□□□ 1.64
NPAS1-202ENST00000449844 PCDHA7Q9UN72 937 aa25.29■■□□□ 1.64
NPAS1-202ENST00000449844 JAG2Q9Y219 1238 aa25.29■■□□□ 1.64
NPAS1-202ENST00000449844 TACC3Q9Y6A5 838 aa25.29■■□□□ 1.64
NPAS1-202ENST00000449844 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.29■■□□□ 1.64
NPAS1-202ENST00000449844 CCDC69A6NI79 296 aa25.29■■□□□ 1.64
NPAS1-202ENST00000449844 PPEF1O14829 653 aaPredicted RBP25.29■■□□□ 1.64
NPAS1-202ENST00000449844 KINO60870 393 aaKnown RBP25.29■■□□□ 1.64
NPAS1-202ENST00000449844 STK38Q15208 465 aa25.29■■□□□ 1.64
NPAS1-202ENST00000449844 SPTY2D1Q68D10 685 aaPredicted RBP25.29■■□□□ 1.64
NPAS1-202ENST00000449844 MICU3Q86XE3 530 aa25.29■■□□□ 1.64
NPAS1-202ENST00000449844 FSIP1Q8NA03 581 aa25.29■■□□□ 1.64
NPAS1-202ENST00000449844 TDRD7Q8NHU6 1098 aaKnown RBP25.29■■□□□ 1.64
NPAS1-202ENST00000449844 ZNF384Q8TF68 577 aa25.29■■□□□ 1.64
NPAS1-202ENST00000449844 MRPS27Q92552 414 aaKnown RBP25.29■■□□□ 1.64
NPAS1-202ENST00000449844 SLC12A7Q9Y666 1083 aa25.29■■□□□ 1.64
NPAS1-202ENST00000449844 KIAA1551Q9HCM1 1747 aa25.28■■□□□ 1.64
NPAS1-202ENST00000449844 STK36Q9NRP7 1315 aa25.28■■□□□ 1.64
NPAS1-202ENST00000449844 PRDX5P30044 214 aa25.28■■□□□ 1.64
NPAS1-202ENST00000449844 SART3Q15020 963 aaKnown RBP25.28■■□□□ 1.64
NPAS1-202ENST00000449844 NTRK3Q16288 839 aa25.28■■□□□ 1.64
NPAS1-202ENST00000449844 SYNE3Q6ZMZ3 975 aa25.28■■□□□ 1.64
NPAS1-202ENST00000449844 INCENPQ9NQS7 918 aa25.28■■□□□ 1.64
NPAS1-202ENST00000449844 COL11A2P13942 1736 aaPredicted RBP25.27■■□□□ 1.64
NPAS1-202ENST00000449844 AP5Z1O43299 807 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms