RNA–Protein interactions for RNA: ENST00000447016.6

PRDM15-206, Transcript of PR/SET domain 15, humanhuman

TSL 1 (best)

Gene PRDM15, Length 4,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-206ENST00000447016 NLRP3Q96P20 1036 aa14.9□□□□□ -0.02
PRDM15-206ENST00000447016 EIF2AK4Q9P2K8 1649 aaKnown RBP14.9□□□□□ -0.02
PRDM15-206ENST00000447016 NPC1L1Q9UHC9 1359 aa14.9□□□□□ -0.02
PRDM15-206ENST00000447016 PHLDB2Q86SQ0 1253 aa14.9□□□□□ -0.02
PRDM15-206ENST00000447016 SMC1BQ8NDV3 1235 aa14.9□□□□□ -0.02
PRDM15-206ENST00000447016 MCUR1Q96AQ8 359 aa14.9□□□□□ -0.02
PRDM15-206ENST00000447016 GLT8D2Q9H1C3 349 aa14.9□□□□□ -0.02
PRDM15-206ENST00000447016 ANGEL1Q9UNK9 670 aaKnown RBP14.9□□□□□ -0.02
PRDM15-206ENST00000447016 DCAF17Q5H9S7 520 aaPredicted RBP14.89□□□□□ -0.03
PRDM15-206ENST00000447016 PHF23Q9BUL5 403 aaPredicted RBP14.89□□□□□ -0.03
PRDM15-206ENST00000447016 MTHFSDQ2M296 383 aaKnown RBP14.89□□□□□ -0.03
PRDM15-206ENST00000447016 CCDC62Q6P9F0 684 aa14.89□□□□□ -0.03
PRDM15-206ENST00000447016 ZNF804AQ7Z570 1209 aa14.89□□□□□ -0.03
PRDM15-206ENST00000447016 RPUSD2Q8IZ73 545 aaKnown RBP14.89□□□□□ -0.03
PRDM15-206ENST00000447016 CASQ2O14958 399 aaPredicted RBP14.89□□□□□ -0.03
PRDM15-206ENST00000447016 RASSF2P50749 326 aa14.89□□□□□ -0.03
PRDM15-206ENST00000447016 ZNF174Q15697 407 aa14.89□□□□□ -0.03
PRDM15-206ENST00000447016 MCM9Q9NXL9 1143 aa14.89□□□□□ -0.03
PRDM15-206ENST00000447016 MAP3K5Q99683 1374 aa14.89□□□□□ -0.03
PRDM15-206ENST00000447016 SND1Q7KZF4 910 aaKnown RBP eCLIP14.88□□□□□ -0.03
PRDM15-206ENST00000447016 HOXB7P09629 217 aa14.88□□□□□ -0.03
PRDM15-206ENST00000447016 PNMA8AQ86V59 439 aaPredicted RBP14.88□□□□□ -0.03
PRDM15-206ENST00000447016 MAGEB6Q8N7X4 407 aa14.88□□□□□ -0.03
PRDM15-206ENST00000447016 WWC3Q9ULE0 1092 aa14.88□□□□□ -0.03
PRDM15-206ENST00000447016 NESP48681 1621 aa14.88□□□□□ -0.03
PRDM15-206ENST00000447016 PSMD1Q99460 953 aa14.88□□□□□ -0.03
PRDM15-206ENST00000447016 MSH6P52701 1360 aa14.88□□□□□ -0.03
PRDM15-206ENST00000447016 MAP2K2P36507 400 aa14.88□□□□□ -0.03
PRDM15-206ENST00000447016 ST5P78524 1137 aa14.88□□□□□ -0.03
PRDM15-206ENST00000447016 HAUS3Q68CZ6 603 aa14.88□□□□□ -0.03
PRDM15-206ENST00000447016 ZCRB1Q8TBF4 217 aaKnown RBP14.88□□□□□ -0.03
PRDM15-206ENST00000447016 MAK16Q9BXY0 300 aaKnown RBP14.88□□□□□ -0.03
PRDM15-206ENST00000447016 RNF123Q5XPI4 1314 aa14.88□□□□□ -0.03
PRDM15-206ENST00000447016 POLR2DO15514 142 aaKnown RBP14.87□□□□□ -0.03
PRDM15-206ENST00000447016 SETSIPP0DME0 302 aa14.87□□□□□ -0.03
PRDM15-206ENST00000447016 PPP2R5EQ16537 467 aa14.87□□□□□ -0.03
PRDM15-206ENST00000447016 SLC4A8Q2Y0W8 1093 aa14.87□□□□□ -0.03
PRDM15-206ENST00000447016 DIS3L2Q8IYB7 885 aaKnown RBP14.87□□□□□ -0.03
PRDM15-206ENST00000447016 VPS52Q8N1B4 723 aa14.87□□□□□ -0.03
PRDM15-206ENST00000447016 PPP1R12CQ9BZL4 782 aa14.87□□□□□ -0.03
PRDM15-206ENST00000447016 PARP2Q9UGN5 583 aa14.87□□□□□ -0.03
PRDM15-206ENST00000447016 FLOT1O75955 427 aa14.87□□□□□ -0.03
PRDM15-206ENST00000447016 GKAP1Q5VSY0 366 aaPredicted RBP14.87□□□□□ -0.03
PRDM15-206ENST00000447016 MAIP1Q8WWC4 291 aa14.87□□□□□ -0.03
PRDM15-206ENST00000447016 TESK2Q96S53 571 aa14.87□□□□□ -0.03
PRDM15-206ENST00000447016 EFCAB8A8MWE9 144 aa14.87□□□□□ -0.03
PRDM15-206ENST00000447016 CALUO43852 315 aaPredicted RBP14.87□□□□□ -0.03
PRDM15-206ENST00000447016 CPA1P15085 419 aa14.87□□□□□ -0.03
PRDM15-206ENST00000447016 LIN9Q5TKA1 542 aa14.87□□□□□ -0.03
PRDM15-206ENST00000447016 TMEM63CQ9P1W3 806 aa14.87□□□□□ -0.03
PRDM15-206ENST00000447016 PPIP5K1Q6PFW1 1433 aa14.87□□□□□ -0.03
PRDM15-206ENST00000447016 POSTNQ15063 836 aa14.87□□□□□ -0.03
PRDM15-206ENST00000447016 WDR44Q5JSH3 913 aa14.87□□□□□ -0.03
PRDM15-206ENST00000447016 PARP1P09874 1014 aaKnown RBP14.86□□□□□ -0.03
PRDM15-206ENST00000447016 RPS6KA1Q15418 735 aa14.86□□□□□ -0.03
PRDM15-206ENST00000447016 LGSNQ5TDP6 509 aa14.86□□□□□ -0.03
PRDM15-206ENST00000447016 C17orf53Q8N3J3 647 aaPredicted RBP14.86□□□□□ -0.03
PRDM15-206ENST00000447016 FAM204AQ9H8W3 233 aa14.86□□□□□ -0.03
PRDM15-206ENST00000447016 DDX21Q9NR30 783 aaKnown RBP eCLIP14.86□□□□□ -0.03
PRDM15-206ENST00000447016 SNX16P57768 344 aa14.86□□□□□ -0.03
PRDM15-206ENST00000447016 FBXO31Q5XUX0 539 aaPredicted RBP14.86□□□□□ -0.03
PRDM15-206ENST00000447016 APPBP2Q92624 585 aa14.86□□□□□ -0.03
PRDM15-206ENST00000447016 RAB17Q9H0T7 212 aa14.86□□□□□ -0.03
PRDM15-206ENST00000447016 MED4Q9NPJ6 270 aa14.86□□□□□ -0.03
PRDM15-206ENST00000447016 SAR1BQ9Y6B6 198 aa14.86□□□□□ -0.03
PRDM15-206ENST00000447016 CEP104O60308 925 aa14.86□□□□□ -0.03
PRDM15-206ENST00000447016 STX10O60499 249 aa14.86□□□□□ -0.03
PRDM15-206ENST00000447016 RNF40O75150 1001 aa14.86□□□□□ -0.03
PRDM15-206ENST00000447016 NCBP1Q09161 790 aaKnown RBP14.86□□□□□ -0.03
PRDM15-206ENST00000447016 HHATQ5VTY9 493 aa14.86□□□□□ -0.03
PRDM15-206ENST00000447016 SSH2Q76I76 1423 aa14.86□□□□□ -0.03
PRDM15-206ENST00000447016 KIF24Q5T7B8 1368 aa14.86□□□□□ -0.03
PRDM15-206ENST00000447016 CLGNO14967 610 aa14.86□□□□□ -0.03
PRDM15-206ENST00000447016 CWF19L2Q2TBE0 894 aaKnown RBP14.86□□□□□ -0.03
PRDM15-206ENST00000447016 LETM2Q2VYF4 491 aa14.86□□□□□ -0.03
PRDM15-206ENST00000447016 ZKSCAN3Q9BRR0 538 aa14.86□□□□□ -0.03
PRDM15-206ENST00000447016 BCAP29Q9UHQ4 241 aa14.86□□□□□ -0.03
PRDM15-206ENST00000447016 IQSEC3Q9UPP2 1182 aaPredicted RBP14.86□□□□□ -0.03
PRDM15-206ENST00000447016 ZWINTO95229 277 aa14.85□□□□□ -0.03
PRDM15-206ENST00000447016 TTC38Q5R3I4 469 aa14.85□□□□□ -0.03
PRDM15-206ENST00000447016 SDCCAG8Q86SQ7 713 aaPredicted RBP14.85□□□□□ -0.03
PRDM15-206ENST00000447016 GABPB2Q8TAK5 448 aaPredicted RBP14.85□□□□□ -0.03
PRDM15-206ENST00000447016 ARHGEF2Q92974 986 aaKnown RBP14.85□□□□□ -0.03
PRDM15-206ENST00000447016 MRFAP1L1Q96HT8 127 aa14.85□□□□□ -0.03
PRDM15-206ENST00000447016 GOLGA8KD6RF30 607 aa14.85□□□□□ -0.03
PRDM15-206ENST00000447016 ATP8B1O43520 1251 aa14.85□□□□□ -0.03
PRDM15-206ENST00000447016 GAS8O95995 478 aa14.85□□□□□ -0.03
PRDM15-206ENST00000447016 RXRAP19793 462 aa14.85□□□□□ -0.03
PRDM15-206ENST00000447016 ETF1P62495 437 aaKnown RBP14.85□□□□□ -0.03
PRDM15-206ENST00000447016 ANKRD2Q9GZV1 360 aa14.85□□□□□ -0.03
PRDM15-206ENST00000447016 ODF2LQ9ULJ1 636 aa14.85□□□□□ -0.03
PRDM15-206ENST00000447016 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
PRDM15-206ENST00000447016 GADD45BO75293 160 aaPredicted RBP14.85□□□□□ -0.03
PRDM15-206ENST00000447016 RFC4P35249 363 aa14.85□□□□□ -0.03
PRDM15-206ENST00000447016 RNF10Q8N5U6 811 aaKnown RBP14.85□□□□□ -0.03
PRDM15-206ENST00000447016 NYXQ9GZU5 481 aa14.85□□□□□ -0.03
PRDM15-206ENST00000447016 BICC1Q9H694 974 aaKnown RBP14.85□□□□□ -0.03
PRDM15-206ENST00000447016 KDM5BQ9UGL1 1544 aa14.85□□□□□ -0.03
PRDM15-206ENST00000447016 EYA2O00167 538 aa14.85□□□□□ -0.03
PRDM15-206ENST00000447016 HSPA1LP34931 641 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms