RNA–Protein interactions for RNA: ENST00000446548.1

LINC00578-204, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-204ENST00000446548 FKBP4Q02790 459 aaKnown RBP eCLIP10.48□□□□□ -0.73
LINC00578-204ENST00000446548 MSS51Q4VC12 460 aa10.48□□□□□ -0.73
LINC00578-204ENST00000446548 CNBD1Q8NA66 436 aa10.48□□□□□ -0.73
LINC00578-204ENST00000446548 ANKLE1Q8NAG6 615 aa10.48□□□□□ -0.73
LINC00578-204ENST00000446548 UPF3BQ9BZI7 483 aaKnown RBP10.48□□□□□ -0.73
LINC00578-204ENST00000446548 HMG20BQ9P0W2 317 aa10.48□□□□□ -0.73
LINC00578-204ENST00000446548 MINPP1Q9UNW1 487 aa10.48□□□□□ -0.73
LINC00578-204ENST00000446548 CACNA1SQ13698 1873 aa10.48□□□□□ -0.73
LINC00578-204ENST00000446548 CHD4Q14839 1912 aa10.48□□□□□ -0.73
LINC00578-204ENST00000446548 WTIPA6NIX2 430 aaPredicted RBP10.47□□□□□ -0.73
LINC00578-204ENST00000446548 POLRMTO00411 1230 aaKnown RBP10.47□□□□□ -0.73
LINC00578-204ENST00000446548 SERPINB2P05120 415 aa10.47□□□□□ -0.73
LINC00578-204ENST00000446548 RPS8P62241 208 aaKnown RBP10.47□□□□□ -0.73
LINC00578-204ENST00000446548 GUCA2AQ02747 115 aa10.47□□□□□ -0.73
LINC00578-204ENST00000446548 RASGRF1Q13972 1273 aa10.47□□□□□ -0.73
LINC00578-204ENST00000446548 COL9A3Q14050 684 aaPredicted RBP10.47□□□□□ -0.73
LINC00578-204ENST00000446548 UBE4AQ14139 1066 aa10.47□□□□□ -0.73
LINC00578-204ENST00000446548 ADCK5Q3MIX3 580 aa10.47□□□□□ -0.73
LINC00578-204ENST00000446548 OSBP2Q969R2 916 aa10.47□□□□□ -0.73
LINC00578-204ENST00000446548 USB1Q9BQ65 265 aaKnown RBP10.47□□□□□ -0.73
LINC00578-204ENST00000446548 TM6SF1Q9BZW5 370 aa10.47□□□□□ -0.73
LINC00578-204ENST00000446548 CHMP5Q9NZZ3 219 aa10.47□□□□□ -0.73
LINC00578-204ENST00000446548 ZNF804BA4D1E1 1349 aa10.47□□□□□ -0.73
LINC00578-204ENST00000446548 CCDC88AQ3V6T2 1871 aa10.47□□□□□ -0.73
LINC00578-204ENST00000446548 MOXD2PA6NHM9 499 aa10.46□□□□□ -0.73
LINC00578-204ENST00000446548 FOXP2O15409 715 aa10.46□□□□□ -0.73
LINC00578-204ENST00000446548 ZFYP08048 801 aaPredicted RBP10.46□□□□□ -0.73
LINC00578-204ENST00000446548 HMGB2P26583 209 aaKnown RBP10.46□□□□□ -0.73
LINC00578-204ENST00000446548 ADD2P35612 726 aa10.46□□□□□ -0.73
LINC00578-204ENST00000446548 MCM2P49736 904 aa10.46□□□□□ -0.73
LINC00578-204ENST00000446548 CUL4AQ13619 759 aa10.46□□□□□ -0.73
LINC00578-204ENST00000446548 TSGA10IPQ3SY00 556 aa10.46□□□□□ -0.73
LINC00578-204ENST00000446548 VPS53Q5VIR6 699 aa10.46□□□□□ -0.73
LINC00578-204ENST00000446548 SLC51AQ86UW1 340 aa10.46□□□□□ -0.73
LINC00578-204ENST00000446548 COL23A1Q86Y22 540 aaPredicted RBP10.46□□□□□ -0.73
LINC00578-204ENST00000446548 IL27Q8NEV9 243 aa10.46□□□□□ -0.73
LINC00578-204ENST00000446548 APPBP2Q92624 585 aa10.46□□□□□ -0.73
LINC00578-204ENST00000446548 TMX3Q96JJ7 454 aa10.46□□□□□ -0.73
LINC00578-204ENST00000446548 DSCC1Q9BVC3 393 aa10.46□□□□□ -0.73
LINC00578-204ENST00000446548 PRKD2Q9BZL6 878 aa10.46□□□□□ -0.73
LINC00578-204ENST00000446548 KDM4CQ9H3R0 1056 aa10.46□□□□□ -0.73
LINC00578-204ENST00000446548 IRS2Q9Y4H2 1338 aa10.46□□□□□ -0.73
LINC00578-204ENST00000446548 PNPLA7Q6ZV29 1317 aa10.45□□□□□ -0.74
LINC00578-204ENST00000446548 TCRBV5S4A2TA0A5A2 114 aa10.45□□□□□ -0.74
LINC00578-204ENST00000446548 CPA1P15085 419 aa10.45□□□□□ -0.74
LINC00578-204ENST00000446548 NDUFV2P19404 249 aa10.45□□□□□ -0.74
LINC00578-204ENST00000446548 KCNJ4P48050 445 aa10.45□□□□□ -0.74
LINC00578-204ENST00000446548 GRAPQ13588 217 aa10.45□□□□□ -0.74
LINC00578-204ENST00000446548 TTF1Q15361 905 aaPredicted RBP10.45□□□□□ -0.74
LINC00578-204ENST00000446548 NFKBIBQ15653 356 aa10.45□□□□□ -0.74
LINC00578-204ENST00000446548 CRY2Q49AN0 593 aa10.45□□□□□ -0.74
LINC00578-204ENST00000446548 FAM160A2Q8N612 972 aaPredicted RBP10.45□□□□□ -0.74
LINC00578-204ENST00000446548 SPATA5Q8NB90 893 aa10.45□□□□□ -0.74
LINC00578-204ENST00000446548 GRAPLQ8TC17 118 aaPredicted RBP10.45□□□□□ -0.74
LINC00578-204ENST00000446548 JAKMIP1Q96N16 626 aaKnown RBP10.45□□□□□ -0.74
LINC00578-204ENST00000446548 WWC3Q9ULE0 1092 aa10.45□□□□□ -0.74
LINC00578-204ENST00000446548 V9GY48 417 aaPredicted RBP10.45□□□□□ -0.74
LINC00578-204ENST00000446548 TIAM2Q8IVF5 1701 aa10.44□□□□□ -0.74
LINC00578-204ENST00000446548 KLRG2A4D1S0 409 aaPredicted RBP10.44□□□□□ -0.74
LINC00578-204ENST00000446548 C6orf229H3BNL8 230 aa10.44□□□□□ -0.74
LINC00578-204ENST00000446548 PPEF1O14829 653 aaPredicted RBP10.44□□□□□ -0.74
LINC00578-204ENST00000446548 HSPD1P10809 573 aaKnown RBP10.44□□□□□ -0.74
LINC00578-204ENST00000446548 PDE6AP16499 860 aa10.44□□□□□ -0.74
LINC00578-204ENST00000446548 CASTP20810 708 aaKnown RBP10.44□□□□□ -0.74
LINC00578-204ENST00000446548 KLRK1P26718 216 aa10.44□□□□□ -0.74
LINC00578-204ENST00000446548 GJA5P36382 358 aa10.44□□□□□ -0.74
LINC00578-204ENST00000446548 GYG1P46976 350 aa10.44□□□□□ -0.74
LINC00578-204ENST00000446548 AK2P54819 239 aa10.44□□□□□ -0.74
LINC00578-204ENST00000446548 ST5P78524 1137 aa10.44□□□□□ -0.74
LINC00578-204ENST00000446548 UBE3CQ15386 1083 aa10.44□□□□□ -0.74
LINC00578-204ENST00000446548 LRRFIP1Q32MZ4 808 aaKnown RBP10.44□□□□□ -0.74
LINC00578-204ENST00000446548 RUFY3Q7L099 469 aa10.44□□□□□ -0.74
LINC00578-204ENST00000446548 FBXO33Q7Z6M2 555 aa10.44□□□□□ -0.74
LINC00578-204ENST00000446548 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.44□□□□□ -0.74
LINC00578-204ENST00000446548 ANKRD2Q9GZV1 360 aa10.44□□□□□ -0.74
LINC00578-204ENST00000446548 PUS7LQ9H0K6 701 aaKnown RBP10.44□□□□□ -0.74
LINC00578-204ENST00000446548 GPBP1L1Q9HC44 474 aaPredicted RBP10.44□□□□□ -0.74
LINC00578-204ENST00000446548 TFCP2L1Q9NZI6 479 aa10.44□□□□□ -0.74
LINC00578-204ENST00000446548 ZNF532Q9HCE3 1301 aa10.43□□□□□ -0.74
LINC00578-204ENST00000446548 A0A0G2JLW4 131 aa10.43□□□□□ -0.74
LINC00578-204ENST00000446548 NPHP1O15259 732 aa10.43□□□□□ -0.74
LINC00578-204ENST00000446548 CYP21A2P08686 494 aa10.43□□□□□ -0.74
LINC00578-204ENST00000446548 ZKSCAN1P17029 563 aaPredicted RBP10.43□□□□□ -0.74
LINC00578-204ENST00000446548 WASHC4Q2M389 1173 aa10.43□□□□□ -0.74
LINC00578-204ENST00000446548 RNF20Q5VTR2 975 aa10.43□□□□□ -0.74
LINC00578-204ENST00000446548 ZSCAN25Q6NSZ9 544 aa10.43□□□□□ -0.74
LINC00578-204ENST00000446548 STOX1Q6ZVD7 989 aa10.43□□□□□ -0.74
LINC00578-204ENST00000446548 RETREG3Q86VR2 466 aa10.43□□□□□ -0.74
LINC00578-204ENST00000446548 ZGPATQ8N5A5 531 aaKnown RBP10.43□□□□□ -0.74
LINC00578-204ENST00000446548 FAM84BQ96KN1 310 aaPredicted RBP10.43□□□□□ -0.74
LINC00578-204ENST00000446548 CYP46A1Q9Y6A2 500 aa10.43□□□□□ -0.74
LINC00578-204ENST00000446548 GPAA1O43292 621 aa10.42□□□□□ -0.74
LINC00578-204ENST00000446548 FRAT2O75474 233 aaPredicted RBP10.42□□□□□ -0.74
LINC00578-204ENST00000446548 IDH1O75874 414 aaKnown RBP10.42□□□□□ -0.74
LINC00578-204ENST00000446548 LARGE1O95461 756 aa10.42□□□□□ -0.74
LINC00578-204ENST00000446548 HSP90AA1P07900 732 aaKnown RBP10.42□□□□□ -0.74
LINC00578-204ENST00000446548 RPS6KB1P23443 525 aa10.42□□□□□ -0.74
LINC00578-204ENST00000446548 HOXA10P31260 410 aaPredicted RBP10.42□□□□□ -0.74
LINC00578-204ENST00000446548 RAB3GAP1Q15042 981 aa10.42□□□□□ -0.74
LINC00578-204ENST00000446548 SLC9C2Q5TAH2 1124 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms