RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 LLPHQ9BRT6 129 aaKnown RBP20.84■□□□□ 0.93
SHANK3-203ENST00000445220 PAG1Q9NWQ8 432 aa20.84■□□□□ 0.93
SHANK3-203ENST00000445220 UTP11Q9Y3A2 253 aaKnown RBP20.84■□□□□ 0.93
SHANK3-203ENST00000445220 MRVI1Q9Y6F6 885 aa20.84■□□□□ 0.93
SHANK3-203ENST00000445220 SH3BGRP55822 239 aaPredicted RBP20.84■□□□□ 0.93
SHANK3-203ENST00000445220 TRAF1Q13077 416 aa20.84■□□□□ 0.93
SHANK3-203ENST00000445220 RNF168Q8IYW5 571 aaPredicted RBP20.84■□□□□ 0.93
SHANK3-203ENST00000445220 VPS16Q9H269 839 aa20.84■□□□□ 0.93
SHANK3-203ENST00000445220 CABP5Q9NP86 173 aa20.84■□□□□ 0.93
SHANK3-203ENST00000445220 MED4Q9NPJ6 270 aa20.84■□□□□ 0.93
SHANK3-203ENST00000445220 ZNF853P0CG23 659 aa20.84■□□□□ 0.93
SHANK3-203ENST00000445220 IL2RBP14784 551 aa20.84■□□□□ 0.93
SHANK3-203ENST00000445220 LIG3P49916 1009 aa20.84■□□□□ 0.93
SHANK3-203ENST00000445220 MTMR3Q13615 1198 aa20.84■□□□□ 0.93
SHANK3-203ENST00000445220 CEP128Q6ZU80 1094 aa20.84■□□□□ 0.93
SHANK3-203ENST00000445220 CEP120Q8N960 986 aa20.84■□□□□ 0.93
SHANK3-203ENST00000445220 EDC4Q6P2E9 1401 aaKnown RBP20.84■□□□□ 0.93
SHANK3-203ENST00000445220 CYP7A1P22680 504 aa20.84■□□□□ 0.93
SHANK3-203ENST00000445220 NOX5Q96PH1 765 aa20.84■□□□□ 0.93
SHANK3-203ENST00000445220 HOXB7P09629 217 aa20.83■□□□□ 0.93
SHANK3-203ENST00000445220 RPS6KB1P23443 525 aa20.83■□□□□ 0.93
SHANK3-203ENST00000445220 PSMC4P43686 418 aa20.83■□□□□ 0.93
SHANK3-203ENST00000445220 ANO1Q5XXA6 986 aa20.83■□□□□ 0.93
SHANK3-203ENST00000445220 KCNH3Q9ULD8 1083 aa20.83■□□□□ 0.93
SHANK3-203ENST00000445220 CPA1P15085 419 aa20.83■□□□□ 0.93
SHANK3-203ENST00000445220 GNAT2P19087 354 aa20.83■□□□□ 0.93
SHANK3-203ENST00000445220 ST5P78524 1137 aa20.83■□□□□ 0.93
SHANK3-203ENST00000445220 ARHGEF2Q92974 986 aaKnown RBP20.83■□□□□ 0.93
SHANK3-203ENST00000445220 FAM114A2Q9NRY5 505 aa20.83■□□□□ 0.93
SHANK3-203ENST00000445220 ATP8B1O43520 1251 aa20.83■□□□□ 0.92
SHANK3-203ENST00000445220 HOXC9P31274 260 aa20.83■□□□□ 0.92
SHANK3-203ENST00000445220 PHLDB2Q86SQ0 1253 aa20.83■□□□□ 0.92
SHANK3-203ENST00000445220 GAS2L3Q86XJ1 694 aa20.83■□□□□ 0.92
SHANK3-203ENST00000445220 MAP3K19Q56UN5 1328 aa20.83■□□□□ 0.92
SHANK3-203ENST00000445220 CASQ2O14958 399 aaPredicted RBP20.82■□□□□ 0.92
SHANK3-203ENST00000445220 ETF1P62495 437 aaKnown RBP20.82■□□□□ 0.92
SHANK3-203ENST00000445220 RPUSD2Q8IZ73 545 aaKnown RBP20.82■□□□□ 0.92
SHANK3-203ENST00000445220 FAM71BQ8TC56 605 aa20.82■□□□□ 0.92
SHANK3-203ENST00000445220 NOC4LQ9BVI4 516 aaKnown RBP20.82■□□□□ 0.92
SHANK3-203ENST00000445220 CTNND2Q9UQB3 1225 aa20.82■□□□□ 0.92
SHANK3-203ENST00000445220 GCP02774 474 aa20.82■□□□□ 0.92
SHANK3-203ENST00000445220 TPD52P55327 224 aaPredicted RBP20.82■□□□□ 0.92
SHANK3-203ENST00000445220 VWA3BQ502W6 1294 aa20.82■□□□□ 0.92
SHANK3-203ENST00000445220 FAM173BQ6P4H8 233 aa20.82■□□□□ 0.92
SHANK3-203ENST00000445220 NUP58Q9BVL2 599 aa20.82■□□□□ 0.92
SHANK3-203ENST00000445220 EEF2P13639 858 aaKnown RBP20.82■□□□□ 0.92
SHANK3-203ENST00000445220 NLRP3Q96P20 1036 aa20.82■□□□□ 0.92
SHANK3-203ENST00000445220 SLC4A4Q9Y6R1 1079 aa20.82■□□□□ 0.92
SHANK3-203ENST00000445220 ZBTB7BO15156 539 aaPredicted RBP20.82■□□□□ 0.92
SHANK3-203ENST00000445220 CALM1P0DP23 149 aa20.82■□□□□ 0.92
SHANK3-203ENST00000445220 CALM2P0DP24 149 aa20.82■□□□□ 0.92
SHANK3-203ENST00000445220 CALM3P0DP25 149 aa20.82■□□□□ 0.92
SHANK3-203ENST00000445220 RRP15Q9Y3B9 282 aaKnown RBP20.82■□□□□ 0.92
SHANK3-203ENST00000445220 GOLGA8KD6RF30 607 aa20.81■□□□□ 0.92
SHANK3-203ENST00000445220 RILPL1Q5EBL4 403 aa20.81■□□□□ 0.92
SHANK3-203ENST00000445220 SLC9C2Q5TAH2 1124 aa20.81■□□□□ 0.92
SHANK3-203ENST00000445220 KRT79Q5XKE5 535 aa20.81■□□□□ 0.92
SHANK3-203ENST00000445220 BCAS4Q8TDM0 211 aa20.81■□□□□ 0.92
SHANK3-203ENST00000445220 TSKSQ9UJT2 592 aa20.81■□□□□ 0.92
SHANK3-203ENST00000445220 DISP1Q96F81 1524 aa20.81■□□□□ 0.92
SHANK3-203ENST00000445220 RNF113AO15541 343 aaKnown RBP20.81■□□□□ 0.92
SHANK3-203ENST00000445220 MTX1Q13505 466 aa20.81■□□□□ 0.92
SHANK3-203ENST00000445220 GKAP1Q5VSY0 366 aaPredicted RBP20.81■□□□□ 0.92
SHANK3-203ENST00000445220 DDX21Q9NR30 783 aaKnown RBP eCLIP20.81■□□□□ 0.92
SHANK3-203ENST00000445220 CHST3Q7LGC8 479 aa20.81■□□□□ 0.92
SHANK3-203ENST00000445220 GBP5Q96PP8 586 aa20.81■□□□□ 0.92
SHANK3-203ENST00000445220 SYNRGQ9UMZ2 1314 aa20.81■□□□□ 0.92
SHANK3-203ENST00000445220 RNMTO43148 476 aaKnown RBP20.8■□□□□ 0.92
SHANK3-203ENST00000445220 KRT9P35527 623 aa20.8■□□□□ 0.92
SHANK3-203ENST00000445220 GJC1P36383 396 aa20.8■□□□□ 0.92
SHANK3-203ENST00000445220 CFAP157Q5JU67 520 aa20.8■□□□□ 0.92
SHANK3-203ENST00000445220 XPO4Q9C0E2 1151 aaKnown RBP20.8■□□□□ 0.92
SHANK3-203ENST00000445220 NFE2L3Q9Y4A8 694 aa20.8■□□□□ 0.92
SHANK3-203ENST00000445220 SNX14Q9Y5W7 946 aa20.8■□□□□ 0.92
SHANK3-203ENST00000445220 POLD1P28340 1107 aa20.8■□□□□ 0.92
SHANK3-203ENST00000445220 PA2G4Q9UQ80 394 aaKnown RBP20.8■□□□□ 0.92
SHANK3-203ENST00000445220 ZNF131P52739 623 aa20.8■□□□□ 0.92
SHANK3-203ENST00000445220 SETDB2Q96T68 719 aa20.8■□□□□ 0.92
SHANK3-203ENST00000445220 CAPS2Q9BXY5 557 aa20.8■□□□□ 0.92
SHANK3-203ENST00000445220 RIPOR2Q9Y4F9 1068 aa20.8■□□□□ 0.92
SHANK3-203ENST00000445220 RTL9Q8NET4 1388 aa20.8■□□□□ 0.92
SHANK3-203ENST00000445220 DTHD1Q6ZMT9 781 aa20.8■□□□□ 0.92
SHANK3-203ENST00000445220 HEATR3Q7Z4Q2 680 aa20.8■□□□□ 0.92
SHANK3-203ENST00000445220 NFATC2IPQ8NCF5 419 aa20.8■□□□□ 0.92
SHANK3-203ENST00000445220 EFCC1Q9HA90 598 aa20.8■□□□□ 0.92
SHANK3-203ENST00000445220 PLCB1Q9NQ66 1216 aa20.8■□□□□ 0.92
SHANK3-203ENST00000445220 SBNO1A3KN83 1393 aa20.8■□□□□ 0.92
SHANK3-203ENST00000445220 ZNF202O95125 648 aa20.79■□□□□ 0.92
SHANK3-203ENST00000445220 CFAP221Q4G0U5 840 aa20.79■□□□□ 0.92
SHANK3-203ENST00000445220 NAA16Q6N069 864 aaPredicted RBP20.79■□□□□ 0.92
SHANK3-203ENST00000445220 SYNCQ9H7C4 482 aa20.79■□□□□ 0.92
SHANK3-203ENST00000445220 SMARCC2Q8TAQ2 1214 aa20.79■□□□□ 0.92
SHANK3-203ENST00000445220 LRMPQ12912 555 aa20.79■□□□□ 0.92
SHANK3-203ENST00000445220 CCDC62Q6P9F0 684 aa20.79■□□□□ 0.92
SHANK3-203ENST00000445220 KCNA6P17658 529 aa20.79■□□□□ 0.92
SHANK3-203ENST00000445220 RFC1P35251 1148 aaPredicted RBP20.79■□□□□ 0.92
SHANK3-203ENST00000445220 SH2D4BQ5SQS7 431 aa20.79■□□□□ 0.92
SHANK3-203ENST00000445220 BICD1Q96G01 975 aa20.79■□□□□ 0.92
SHANK3-203ENST00000445220 STX8Q9UNK0 236 aa20.79■□□□□ 0.92
SHANK3-203ENST00000445220 ZMYM4Q5VZL5 1548 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms