RNA–Protein interactions for RNA: ENST00000444029.5

PARVB-205, Transcript of parvin beta, humanhuman

TSL 5

Gene PARVB, Length 742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-205ENST00000444029 ATP11BQ9Y2G3 1177 aa12.76□□□□□ -0.37
PARVB-205ENST00000444029 COL6A1P12109 1028 aa12.75□□□□□ -0.37
PARVB-205ENST00000444029 PTPRAP18433 802 aa12.75□□□□□ -0.37
PARVB-205ENST00000444029 CCND3P30281 292 aaPredicted RBP12.75□□□□□ -0.37
PARVB-205ENST00000444029 GRIN2CQ14957 1233 aa12.75□□□□□ -0.37
PARVB-205ENST00000444029 CCDC85BQ15834 202 aaPredicted RBP12.75□□□□□ -0.37
PARVB-205ENST00000444029 TREML2Q5T2D2 321 aa12.75□□□□□ -0.37
PARVB-205ENST00000444029 LMBR1LQ6UX01 489 aa12.75□□□□□ -0.37
PARVB-205ENST00000444029 UHRF1Q96T88 793 aaPredicted RBP12.75□□□□□ -0.37
PARVB-205ENST00000444029 AFG3L2Q9Y4W6 797 aa12.75□□□□□ -0.37
PARVB-205ENST00000444029 PEX10O60683 326 aa12.74□□□□□ -0.37
PARVB-205ENST00000444029 MYCNP04198 464 aaPredicted RBP12.74□□□□□ -0.37
PARVB-205ENST00000444029 CASP7P55210 303 aa12.74□□□□□ -0.37
PARVB-205ENST00000444029 HDLBPQ00341 1268 aaKnown RBP12.74□□□□□ -0.37
PARVB-205ENST00000444029 CACNB2Q08289 660 aaPredicted RBP12.74□□□□□ -0.37
PARVB-205ENST00000444029 NFIAQ12857 509 aa12.74□□□□□ -0.37
PARVB-205ENST00000444029 NOL9Q5SY16 702 aaKnown RBP12.74□□□□□ -0.37
PARVB-205ENST00000444029 FKBP1CQ5VVH2 108 aa12.74□□□□□ -0.37
PARVB-205ENST00000444029 ZSCAN29Q8IWY8 852 aaPredicted RBP12.74□□□□□ -0.37
PARVB-205ENST00000444029 SCYL3Q8IZE3 742 aa12.74□□□□□ -0.37
PARVB-205ENST00000444029 BADQ92934 168 aa12.74□□□□□ -0.37
PARVB-205ENST00000444029 LRRFIP2Q9Y608 721 aaKnown RBP12.74□□□□□ -0.37
PARVB-205ENST00000444029 FOXO4P98177 505 aa12.73□□□□□ -0.37
PARVB-205ENST00000444029 UBE4AQ14139 1066 aa12.73□□□□□ -0.37
PARVB-205ENST00000444029 CDC42EP5Q6NZY7 148 aa12.73□□□□□ -0.37
PARVB-205ENST00000444029 TSPYL6Q8N831 410 aa12.73□□□□□ -0.37
PARVB-205ENST00000444029 TBC1D22AQ8WUA7 517 aa12.73□□□□□ -0.37
PARVB-205ENST00000444029 RUNDC1Q96C34 613 aa12.73□□□□□ -0.37
PARVB-205ENST00000444029 STK31Q9BXU1 1019 aa12.73□□□□□ -0.37
PARVB-205ENST00000444029 PUS3Q9BZE2 481 aaKnown RBP12.73□□□□□ -0.37
PARVB-205ENST00000444029 MYH16Q9H6N6 1097 aa12.73□□□□□ -0.37
PARVB-205ENST00000444029 USP40Q9NVE5 1235 aa12.73□□□□□ -0.37
PARVB-205ENST00000444029 ECM29Q5VYK3 1845 aa12.72□□□□□ -0.37
PARVB-205ENST00000444029 SLC4A2P04920 1241 aa12.72□□□□□ -0.37
PARVB-205ENST00000444029 CNGA1P29973 690 aa12.72□□□□□ -0.37
PARVB-205ENST00000444029 ZEB1P37275 1124 aaPredicted RBP12.72□□□□□ -0.37
PARVB-205ENST00000444029 RTP1P59025 263 aa12.72□□□□□ -0.37
PARVB-205ENST00000444029 SMAD3P84022 425 aaKnown RBP12.72□□□□□ -0.37
PARVB-205ENST00000444029 FAM110CQ1W6H9 321 aa12.72□□□□□ -0.37
PARVB-205ENST00000444029 CAVIN4Q5BKX8 364 aa12.72□□□□□ -0.37
PARVB-205ENST00000444029 LHX8Q68G74 356 aa12.72□□□□□ -0.37
PARVB-205ENST00000444029 ALYREFQ86V81 257 aaKnown RBP12.72□□□□□ -0.37
PARVB-205ENST00000444029 CCAR1Q8IX12 1150 aaKnown RBP12.72□□□□□ -0.37
PARVB-205ENST00000444029 NECAB3Q96P71 396 aaPredicted RBP12.72□□□□□ -0.37
PARVB-205ENST00000444029 ASB2Q96Q27 587 aa12.72□□□□□ -0.37
PARVB-205ENST00000444029 PNMA3Q9UL41 463 aa12.72□□□□□ -0.37
PARVB-205ENST00000444029 AGTPBP1Q9UPW5 1226 aa12.72□□□□□ -0.37
PARVB-205ENST00000444029 SLC45A1Q9Y2W3 748 aa12.72□□□□□ -0.37
PARVB-205ENST00000444029 PHF20L1A8MW92 1017 aa12.71□□□□□ -0.37
PARVB-205ENST00000444029 ZKSCAN1P17029 563 aaPredicted RBP12.71□□□□□ -0.37
PARVB-205ENST00000444029 CCL14Q16627 93 aa12.71□□□□□ -0.37
PARVB-205ENST00000444029 EPHA10Q5JZY3 1008 aa12.71□□□□□ -0.37
PARVB-205ENST00000444029 NUDT12Q9BQG2 462 aa12.71□□□□□ -0.37
PARVB-205ENST00000444029 SPINK5Q9NQ38 1064 aaPredicted RBP12.71□□□□□ -0.37
PARVB-205ENST00000444029 FAM198AQ9UFP1 575 aa12.71□□□□□ -0.37
PARVB-205ENST00000444029 CDH23Q9H251 3354 aa12.7□□□□□ -0.38
PARVB-205ENST00000444029 GNAI1P63096 354 aa12.7□□□□□ -0.38
PARVB-205ENST00000444029 DIXDC1Q155Q3 683 aa12.7□□□□□ -0.38
PARVB-205ENST00000444029 MAP3K21Q5TCX8 1036 aa12.7□□□□□ -0.38
PARVB-205ENST00000444029 FBXO33Q7Z6M2 555 aa12.7□□□□□ -0.38
PARVB-205ENST00000444029 ATXN2LQ8WWM7 1075 aaKnown RBP12.7□□□□□ -0.38
PARVB-205ENST00000444029 CWC22Q9HCG8 908 aaKnown RBP12.7□□□□□ -0.38
PARVB-205ENST00000444029 HCN4Q9Y3Q4 1203 aa12.7□□□□□ -0.38
PARVB-205ENST00000444029 DDX60LQ5H9U9 1706 aaKnown RBP12.7□□□□□ -0.38
PARVB-205ENST00000444029 ZNF853P0CG23 659 aa12.69□□□□□ -0.38
PARVB-205ENST00000444029 IGFBP4P22692 258 aa12.69□□□□□ -0.38
PARVB-205ENST00000444029 GCLCP48506 637 aaPredicted RBP12.69□□□□□ -0.38
PARVB-205ENST00000444029 MRPS5P82675 430 aaKnown RBP12.69□□□□□ -0.38
PARVB-205ENST00000444029 SPP2Q13103 211 aa12.69□□□□□ -0.38
PARVB-205ENST00000444029 FKBP5Q13451 457 aaPredicted RBP12.69□□□□□ -0.38
PARVB-205ENST00000444029 WDR43Q15061 677 aaKnown RBP eCLIP12.69□□□□□ -0.38
PARVB-205ENST00000444029 HHIPL2Q6UWX4 724 aa12.69□□□□□ -0.38
PARVB-205ENST00000444029 RNPC3Q96LT9 517 aaKnown RBP12.69□□□□□ -0.38
PARVB-205ENST00000444029 MRIQ9BWK5 157 aa12.69□□□□□ -0.38
PARVB-205ENST00000444029 ASCC2Q9H1I8 757 aaPredicted RBP12.69□□□□□ -0.38
PARVB-205ENST00000444029 IFT57Q9NWB7 429 aa12.69□□□□□ -0.38
PARVB-205ENST00000444029 HMGCS2P54868 508 aa12.68□□□□□ -0.38
PARVB-205ENST00000444029 POTEEQ6S8J3 1075 aa12.68□□□□□ -0.38
PARVB-205ENST00000444029 DNAAF4Q8WXU2 420 aa12.68□□□□□ -0.38
PARVB-205ENST00000444029 GAS2L1Q99501 681 aaPredicted RBP12.68□□□□□ -0.38
PARVB-205ENST00000444029 C1QTNF1Q9BXJ1 281 aa12.68□□□□□ -0.38
PARVB-205ENST00000444029 CHMP4AQ9BY43 222 aa12.68□□□□□ -0.38
PARVB-205ENST00000444029 THEGQ9P2T0 379 aa12.68□□□□□ -0.38
PARVB-205ENST00000444029 NDUFB9Q9Y6M9 179 aa12.68□□□□□ -0.38
PARVB-205ENST00000444029 MAST3O60307 1309 aa12.67□□□□□ -0.38
PARVB-205ENST00000444029 RGS3P49796 1198 aa12.67□□□□□ -0.38
PARVB-205ENST00000444029 NCBP3Q53F19 620 aaKnown RBP12.67□□□□□ -0.38
PARVB-205ENST00000444029 METTL24Q5JXM2 366 aa12.67□□□□□ -0.38
PARVB-205ENST00000444029 GJC2Q5T442 439 aaPredicted RBP12.67□□□□□ -0.38
PARVB-205ENST00000444029 SH3RF1Q7Z6J0 888 aa12.67□□□□□ -0.38
PARVB-205ENST00000444029 LINS1Q8NG48 757 aa12.67□□□□□ -0.38
PARVB-205ENST00000444029 ZNF576Q9H609 170 aa12.67□□□□□ -0.38
PARVB-205ENST00000444029 ADAMTS8Q9UP79 889 aa12.67□□□□□ -0.38
PARVB-205ENST00000444029 DAGLAQ9Y4D2 1042 aa12.67□□□□□ -0.38
PARVB-205ENST00000444029 COL2A1P02458 1487 aaPredicted RBP12.66□□□□□ -0.38
PARVB-205ENST00000444029 MGAMO43451 1857 aa12.66□□□□□ -0.38
PARVB-205ENST00000444029 ARAP2Q8WZ64 1704 aa12.66□□□□□ -0.38
PARVB-205ENST00000444029 FAM196BA6NMK8 535 aa12.66□□□□□ -0.38
PARVB-205ENST00000444029 CTNND1O60716 968 aaKnown RBP12.66□□□□□ -0.38
PARVB-205ENST00000444029 PABPC4Q13310 644 aaKnown RBP eCLIP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms