RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 SMCR8Q8TEV9 937 aaPredicted RBP4.65□□□□□ -1.67
R3HDM1-209ENST00000441871 GIMAP1Q8WWP7 306 aa4.65□□□□□ -1.67
R3HDM1-209ENST00000441871 CDK5RAP3Q96JB5 506 aa4.65□□□□□ -1.67
R3HDM1-209ENST00000441871 DEPDC7Q96QD5 511 aa4.65□□□□□ -1.67
R3HDM1-209ENST00000441871 NELL2Q99435 816 aa4.65□□□□□ -1.67
R3HDM1-209ENST00000441871 ABCG4Q9H172 646 aa4.65□□□□□ -1.67
R3HDM1-209ENST00000441871 CSRNP2Q9H175 543 aa4.65□□□□□ -1.67
R3HDM1-209ENST00000441871 RMI1Q9H9A7 625 aa4.65□□□□□ -1.67
R3HDM1-209ENST00000441871 CHCHD3Q9NX63 227 aaKnown RBP4.65□□□□□ -1.67
R3HDM1-209ENST00000441871 HOXC10Q9NYD6 342 aa4.65□□□□□ -1.67
R3HDM1-209ENST00000441871 SEL1LQ9UBV2 794 aa4.65□□□□□ -1.67
R3HDM1-209ENST00000441871 CEP83Q9Y592 693 aa4.65□□□□□ -1.67
R3HDM1-209ENST00000441871 SNX5Q9Y5X3 404 aa4.65□□□□□ -1.67
R3HDM1-209ENST00000441871 USP17L3A6NCW0 530 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 USP17L4A6NCW7 530 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 ALG1L2C9J202 215 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 H0Y3Z8 333 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 CPLX1O14810 134 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 RASGRP1O95267 797 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 ARIH2O95376 493 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 F2P00734 622 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 SLC5A1P13866 664 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 PMLP29590 882 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 UBA7P41226 1012 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 NEK3P51956 506 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 COPAP53621 1224 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 FMR1Q06787 632 aaKnown RBP eCLIP4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 RASA3Q14644 834 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 SMC1AQ14683 1233 aaKnown RBP4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 PPP2R5BQ15173 497 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 TKFCQ3LXA3 575 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 COBLL1Q53SF7 1204 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 LARP1Q6PKG0 1096 aaKnown RBP4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 LVRNQ6Q4G3 990 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 USP17L2Q6R6M4 530 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 TREML4Q6UXN2 200 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 C16orf86Q6ZW13 317 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 USP17L1Q7RTZ2 530 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 TMC7Q7Z402 723 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 MORC1Q86VD1 984 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 DDX42Q86XP3 938 aaKnown RBP eCLIP4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 LINC00528Q8N1L1 170 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 LILRB2Q8N423 598 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 MEIOBQ8N635 442 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 ZNF713Q8N859 430 aaPredicted RBP4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 JPH3Q8WXH2 748 aaPredicted RBP4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 SH3KBP1Q96B97 665 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 FEZ1Q99689 392 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 CENPOQ9BU64 300 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 DIAPH3Q9NSV4 1193 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 GINM1Q9NU53 330 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 ZIM2Q9NZV7 527 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 NXF1Q9UBU9 619 aaKnown RBP4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 TBK1Q9UHD2 729 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 CEP131Q9UPN4 1083 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 IPPQ9Y573 584 aa4.64□□□□□ -1.67
R3HDM1-209ENST00000441871 KLRG2A4D1S0 409 aaPredicted RBP4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 PIK3CDO00329 1044 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 TERTO14746 1132 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 KCNQ2O43526 872 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 NBNO60934 754 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 ECEL1O95672 775 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 SKILP12757 684 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 GLULP15104 373 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 POU3F3P20264 500 aaPredicted RBP4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 MAPK8P45983 427 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 HTR3AP46098 478 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 GJA8P48165 433 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 SH3BGRP55822 239 aaPredicted RBP4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 FKBP4Q02790 459 aaKnown RBP eCLIP4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 BIRC3Q13489 604 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 MLC1Q15049 377 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 FXNQ16595 210 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 SWI5Q1ZZU3 235 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 INTS6LQ5JSJ4 861 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 DACT2Q5SW24 774 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 RNF20Q5VTR2 975 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 MZT2BQ6NZ67 158 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 MCM10Q7L590 875 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 ANKMY2Q8IV38 441 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 TEX9Q8N6V9 391 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 TRPM4Q8TD43 1214 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 ATXN2LQ8WWM7 1075 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 BHMTQ93088 406 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 AGAP3Q96P47 875 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 KLF16Q9BXK1 252 aaPredicted RBP4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 AP1M1Q9BXS5 423 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 TRIM55Q9BYV6 548 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 NUCKS1Q9H1E3 243 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 ZNF408Q9H9D4 720 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 SRA1Q9HD15 236 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 CYLDQ9NQC7 956 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 ATG3Q9NT62 314 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 TRMT1Q9NXH9 659 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 RABL2AQ9UBK7 228 aaPredicted RBP4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 RRP15Q9Y3B9 282 aaKnown RBP4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 IL16Q14005 1332 aa4.63□□□□□ -1.67
R3HDM1-209ENST00000441871 RASSF10A6NK89 507 aa4.62□□□□□ -1.67
R3HDM1-209ENST00000441871 BOLA2-SMG1P6H3BVE0 249 aa4.62□□□□□ -1.67
R3HDM1-209ENST00000441871 TREHO43280 583 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms