RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 CCNJLQ8IV13 435 aa6.11□□□□□ -1.43
HMGB3P9-201ENST00000441799 AGBL5Q8NDL9 886 aa6.11□□□□□ -1.43
HMGB3P9-201ENST00000441799 SPATA32Q96LK8 384 aa6.11□□□□□ -1.43
HMGB3P9-201ENST00000441799 TCF12Q99081 682 aa6.11□□□□□ -1.43
HMGB3P9-201ENST00000441799 YIPF2Q9BWQ6 316 aa6.11□□□□□ -1.43
HMGB3P9-201ENST00000441799 GSX1Q9H4S2 264 aaPredicted RBP6.11□□□□□ -1.43
HMGB3P9-201ENST00000441799 NOP58Q9Y2X3 529 aaKnown RBP6.11□□□□□ -1.43
HMGB3P9-201ENST00000441799 CARMIL2Q6F5E8 1435 aa6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 A0A1W2PP55 124 aa6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 TPD52L2O43399 206 aaKnown RBP6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 RAB6AP20340 208 aa6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 MAP7Q14244 749 aa6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 POU4F3Q15319 338 aa6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 DYMQ7RTS9 669 aa6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 BCL7CQ8WUZ0 217 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 TRIM56Q9BRZ2 755 aaKnown RBP6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 CLEC4MQ9H2X3 399 aaPredicted RBP6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 CCDC87Q9NVE4 849 aa6.1□□□□□ -1.43
HMGB3P9-201ENST00000441799 NRDCO43847 1150 aa6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 IRX3P78415 501 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 EHHADHQ08426 723 aa6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 AKAP4Q5JQC9 854 aa6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 GORABQ5T7V8 394 aa6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 LCE4AQ5TA78 99 aa6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 ZNF574Q6ZN55 896 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 GJD3Q8N144 294 aa6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 SDR16C5Q8N3Y7 309 aa6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 SH3BP1Q9Y3L3 701 aa6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 NESP48681 1621 aa6.09□□□□□ -1.43
HMGB3P9-201ENST00000441799 FANCIQ9NVI1 1328 aa6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 TMEM88BA6NKF7 163 aa6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 SMARCA5O60264 1052 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 EIF4EBP3O60516 100 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 CYP11A1P05108 521 aa6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 CALRP27797 417 aaKnown RBP6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 ASPAP45381 313 aa6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 USP5P45974 858 aa6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 CYP27A1Q02318 531 aa6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 CCDC96Q2M329 555 aa6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 OGFOD3Q6PK18 319 aa6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 MKL1Q969V6 931 aa6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 ZNF830Q96NB3 372 aaPredicted RBP6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 IGSF5Q9NSI5 407 aa6.08□□□□□ -1.44
HMGB3P9-201ENST00000441799 HMGB1P1B2RPK0 211 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 MARCH6O60337 910 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 FAM13AO94988 1023 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 BNIP3Q12983 259 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 RALBP1Q15311 655 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 ZNF792Q3KQV3 632 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 ZNF648Q5T619 568 aaPredicted RBP6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 PHLDB3Q6NSJ2 640 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 EGFL6Q8IUX8 553 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 GALNT12Q8IXK2 581 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 LGR6Q9HBX8 967 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 RAD18Q9NS91 495 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 SLC52A1Q9NWF4 448 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 PPP1R9AQ9ULJ8 1098 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 SLC5A6Q9Y289 635 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 SUGT1Q9Y2Z0 365 aa6.07□□□□□ -1.44
HMGB3P9-201ENST00000441799 ANP32AP39687 249 aaKnown RBP6.06□□□□□ -1.44
HMGB3P9-201ENST00000441799 FKBP4Q02790 459 aaKnown RBP eCLIP6.06□□□□□ -1.44
HMGB3P9-201ENST00000441799 HSP90AA2PQ14568 343 aaPredicted RBP6.06□□□□□ -1.44
HMGB3P9-201ENST00000441799 NBPF9Q3BBW0 867 aa6.06□□□□□ -1.44
HMGB3P9-201ENST00000441799 OTUD6BQ8N6M0 293 aa6.06□□□□□ -1.44
HMGB3P9-201ENST00000441799 MTA3Q9BTC8 594 aa6.06□□□□□ -1.44
HMGB3P9-201ENST00000441799 LIN7BQ9HAP6 207 aa6.06□□□□□ -1.44
HMGB3P9-201ENST00000441799 AP4E1Q9UPM8 1137 aa6.06□□□□□ -1.44
HMGB3P9-201ENST00000441799 NCAPD3P42695 1498 aa6.06□□□□□ -1.44
HMGB3P9-201ENST00000441799 THOC2Q8NI27 1593 aaKnown RBP6.06□□□□□ -1.44
HMGB3P9-201ENST00000441799 AOC2O75106 756 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 B3GALT4O96024 378 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 APPP05067 770 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 ZNF124Q15973 351 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 USPL1Q5W0Q7 1092 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 APBB1IPQ7Z5R6 666 aaPredicted RBP6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 TSPAN18Q96SJ8 248 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 WDR18Q9BV38 432 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 UBA5Q9GZZ9 404 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 TMEM51Q9NW97 253 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 SERPINA10Q9UK55 444 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 DAGLAQ9Y4D2 1042 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 U3KQE9 123 aa6.05□□□□□ -1.44
HMGB3P9-201ENST00000441799 PLCL1Q15111 1095 aa6.04□□□□□ -1.44
HMGB3P9-201ENST00000441799 KIAA0319Q5VV43 1072 aa6.04□□□□□ -1.44
HMGB3P9-201ENST00000441799 CCDC97Q96F63 343 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P9-201ENST00000441799 WDR89Q96FK6 387 aaPredicted RBP6.04□□□□□ -1.44
HMGB3P9-201ENST00000441799 CORO1BQ9BR76 489 aa6.04□□□□□ -1.44
HMGB3P9-201ENST00000441799 ZNF576Q9H609 170 aa6.04□□□□□ -1.44
HMGB3P9-201ENST00000441799 ANO2Q9NQ90 1003 aa6.04□□□□□ -1.44
HMGB3P9-201ENST00000441799 SYNGAP1Q96PV0 1343 aa6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 GOLIM4O00461 696 aa6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 TCERG1O14776 1098 aaKnown RBP6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 SF3B2Q13435 895 aaKnown RBP6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 HP1BP3Q5SSJ5 553 aaPredicted RBP6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 CC2D1BQ5T0F9 858 aaKnown RBP6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 STK11IPQ8N1F8 1099 aa6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 PLD6Q8N2A8 252 aaKnown RBP6.03□□□□□ -1.44
HMGB3P9-201ENST00000441799 GLIS3Q8NEA6 775 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms