RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 HPSEQ9Y251 543 aa23.22■■□□□ 1.31
SHOX2-203ENST00000441443 ANKRD65E5RJM6 399 aa23.22■■□□□ 1.31
SHOX2-203ENST00000441443 M0R2C6 588 aa23.22■■□□□ 1.31
SHOX2-203ENST00000441443 SPECC1Q5M775 1068 aa23.22■■□□□ 1.31
SHOX2-203ENST00000441443 SPECC1LQ69YQ0 1117 aa23.22■■□□□ 1.31
SHOX2-203ENST00000441443 PHRF1Q9P1Y6 1649 aaKnown RBP23.22■■□□□ 1.31
SHOX2-203ENST00000441443 SOWAHDA6NJG2 315 aa23.22■■□□□ 1.31
SHOX2-203ENST00000441443 CUTAO60888 179 aa23.22■■□□□ 1.31
SHOX2-203ENST00000441443 EVA1CP58658 441 aa23.22■■□□□ 1.31
SHOX2-203ENST00000441443 TNS3Q68CZ2 1445 aa23.22■■□□□ 1.31
SHOX2-203ENST00000441443 CNNM3Q8NE01 707 aa23.22■■□□□ 1.31
SHOX2-203ENST00000441443 NBPF26B4DH59 902 aa23.21■■□□□ 1.31
SHOX2-203ENST00000441443 PRC1O43663 620 aa23.21■■□□□ 1.31
SHOX2-203ENST00000441443 NBPF14Q5TI25 921 aa23.21■■□□□ 1.31
SHOX2-203ENST00000441443 NBPF10Q6P3W6 841 aaKnown RBP23.21■■□□□ 1.31
SHOX2-203ENST00000441443 SRGAP1Q7Z6B7 1085 aa23.21■■□□□ 1.31
SHOX2-203ENST00000441443 NBPF15Q8N660 670 aa23.21■■□□□ 1.31
SHOX2-203ENST00000441443 PALLDQ8WX93 1383 aa23.21■■□□□ 1.31
SHOX2-203ENST00000441443 ABCB6Q9NP58 842 aa23.21■■□□□ 1.31
SHOX2-203ENST00000441443 ZNF827Q17R98 1081 aa23.2■■□□□ 1.3
SHOX2-203ENST00000441443 IQUBQ8NA54 791 aa23.2■■□□□ 1.3
SHOX2-203ENST00000441443 CHMP4CQ96CF2 233 aa23.2■■□□□ 1.3
SHOX2-203ENST00000441443 NFE2L3Q9Y4A8 694 aa23.2■■□□□ 1.3
SHOX2-203ENST00000441443 RHOXF2BP0C7M4 288 aa23.2■■□□□ 1.3
SHOX2-203ENST00000441443 FMR1Q06787 632 aaKnown RBP eCLIP23.2■■□□□ 1.3
SHOX2-203ENST00000441443 HDXQ7Z353 690 aa23.2■■□□□ 1.3
SHOX2-203ENST00000441443 LRP10Q7Z4F1 713 aa23.2■■□□□ 1.3
SHOX2-203ENST00000441443 RHOXF2Q9BQY4 288 aa23.2■■□□□ 1.3
SHOX2-203ENST00000441443 VPS37DQ86XT2 251 aa23.19■■□□□ 1.3
SHOX2-203ENST00000441443 RXRAP19793 462 aa23.19■■□□□ 1.3
SHOX2-203ENST00000441443 CCDC102BQ68D86 513 aa23.19■■□□□ 1.3
SHOX2-203ENST00000441443 ZNF594Q96JF6 807 aaPredicted RBP23.19■■□□□ 1.3
SHOX2-203ENST00000441443 CPLX3Q8WVH0 158 aa23.18■■□□□ 1.3
SHOX2-203ENST00000441443 OSBP2Q969R2 916 aa23.18■■□□□ 1.3
SHOX2-203ENST00000441443 PLEKHG2Q9H7P9 1386 aa23.18■■□□□ 1.3
SHOX2-203ENST00000441443 HSP90AB3PQ58FF7 597 aa23.18■■□□□ 1.3
SHOX2-203ENST00000441443 PLEKHA4Q9H4M7 779 aa23.18■■□□□ 1.3
SHOX2-203ENST00000441443 A0A0G2JS52 829 aa23.17■■□□□ 1.3
SHOX2-203ENST00000441443 IVLP07476 585 aa23.17■■□□□ 1.3
SHOX2-203ENST00000441443 CCDC175P0C221 793 aa23.17■■□□□ 1.3
SHOX2-203ENST00000441443 CCDC102AQ96A19 550 aa23.17■■□□□ 1.3
SHOX2-203ENST00000441443 KCNH3Q9ULD8 1083 aa23.17■■□□□ 1.3
SHOX2-203ENST00000441443 RNF113AO15541 343 aaKnown RBP23.17■■□□□ 1.3
SHOX2-203ENST00000441443 PTPAQ15257 358 aa23.17■■□□□ 1.3
SHOX2-203ENST00000441443 PLBD2Q8NHP8 589 aa23.17■■□□□ 1.3
SHOX2-203ENST00000441443 ALG1Q9BT22 464 aa23.17■■□□□ 1.3
SHOX2-203ENST00000441443 SAMSN1Q9NSI8 373 aaKnown RBP23.17■■□□□ 1.3
SHOX2-203ENST00000441443 L1RE1Q9UN81 338 aa23.17■■□□□ 1.3
SHOX2-203ENST00000441443 GTF2A1P52655 376 aaPredicted RBP23.16■■□□□ 1.3
SHOX2-203ENST00000441443 ZNF569Q5MCW4 686 aa23.16■■□□□ 1.3
SHOX2-203ENST00000441443 RESP18Q5W5W9 173 aa23.16■■□□□ 1.3
SHOX2-203ENST00000441443 ANTXR2P58335 489 aa23.16■■□□□ 1.3
SHOX2-203ENST00000441443 RAD9BQ6WBX8 426 aa23.16■■□□□ 1.3
SHOX2-203ENST00000441443 PACS2Q86VP3 889 aa23.16■■□□□ 1.3
SHOX2-203ENST00000441443 STK11IPQ8N1F8 1099 aa23.16■■□□□ 1.3
SHOX2-203ENST00000441443 GOLGA6L1Q8N7Z2 621 aa23.16■■□□□ 1.3
SHOX2-203ENST00000441443 HNRNPLLQ8WVV9 542 aaKnown RBP23.16■■□□□ 1.3
SHOX2-203ENST00000441443 AKAP2Q9Y2D5 859 aa23.16■■□□□ 1.3
SHOX2-203ENST00000441443 JMYQ8N9B5 988 aa23.15■■□□□ 1.3
SHOX2-203ENST00000441443 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.15■■□□□ 1.3
SHOX2-203ENST00000441443 TEX13AQ9BXU3 409 aaPredicted RBP23.15■■□□□ 1.3
SHOX2-203ENST00000441443 CDC23Q9UJX2 597 aa23.15■■□□□ 1.3
SHOX2-203ENST00000441443 KIF1AQ12756 1690 aa23.15■■□□□ 1.3
SHOX2-203ENST00000441443 C5P01031 1676 aa23.15■■□□□ 1.3
SHOX2-203ENST00000441443 IFIT1P09914 478 aaKnown RBP23.15■■□□□ 1.3
SHOX2-203ENST00000441443 VSNL1P62760 191 aa23.15■■□□□ 1.3
SHOX2-203ENST00000441443 KIF4BQ2VIQ3 1234 aa23.15■■□□□ 1.3
SHOX2-203ENST00000441443 RAI14Q9P0K7 980 aa23.15■■□□□ 1.3
SHOX2-203ENST00000441443 MAN1B1Q9UKM7 699 aa23.15■■□□□ 1.3
SHOX2-203ENST00000441443 EIF3CLB5ME19 914 aaKnown RBP23.14■■□□□ 1.3
SHOX2-203ENST00000441443 PPP6R2O75170 966 aa23.14■■□□□ 1.3
SHOX2-203ENST00000441443 EIF3JO75822 258 aaKnown RBP23.14■■□□□ 1.3
SHOX2-203ENST00000441443 FKBP4Q02790 459 aaKnown RBP eCLIP23.14■■□□□ 1.3
SHOX2-203ENST00000441443 SKIDA1Q1XH10 827 aa23.14■■□□□ 1.3
SHOX2-203ENST00000441443 WASHC4Q2M389 1173 aa23.14■■□□□ 1.3
SHOX2-203ENST00000441443 KRT40Q6A162 431 aa23.14■■□□□ 1.3
SHOX2-203ENST00000441443 PHKBQ93100 1093 aa23.14■■□□□ 1.3
SHOX2-203ENST00000441443 EIF3CQ99613 913 aaKnown RBP23.14■■□□□ 1.3
SHOX2-203ENST00000441443 SLAIN2Q9P270 581 aa23.14■■□□□ 1.3
SHOX2-203ENST00000441443 ALS2Q96Q42 1657 aa23.14■■□□□ 1.3
SHOX2-203ENST00000441443 IMMTQ16891 758 aaKnown RBP23.14■■□□□ 1.29
SHOX2-203ENST00000441443 RABL6Q3YEC7 729 aaPredicted RBP23.14■■□□□ 1.29
SHOX2-203ENST00000441443 NOM1Q5C9Z4 860 aaKnown RBP23.14■■□□□ 1.29
SHOX2-203ENST00000441443 GRAMD1CQ8IYS0 662 aa23.14■■□□□ 1.29
SHOX2-203ENST00000441443 ADGRG1Q9Y653 693 aa23.14■■□□□ 1.29
SHOX2-203ENST00000441443 FOXP2O15409 715 aa23.14■■□□□ 1.29
SHOX2-203ENST00000441443 MYO1BO43795 1136 aa23.14■■□□□ 1.29
SHOX2-203ENST00000441443 KIF5CO60282 957 aa23.14■■□□□ 1.29
SHOX2-203ENST00000441443 ERLIN1O75477 346 aa23.14■■□□□ 1.29
SHOX2-203ENST00000441443 FGAP02671 866 aa23.14■■□□□ 1.29
SHOX2-203ENST00000441443 PRR29P0C7W0 189 aa23.14■■□□□ 1.29
SHOX2-203ENST00000441443 ZNF18P17022 549 aa23.14■■□□□ 1.29
SHOX2-203ENST00000441443 CEP112Q8N8E3 955 aa23.14■■□□□ 1.29
SHOX2-203ENST00000441443 MAP3K14Q99558 947 aa23.14■■□□□ 1.29
SHOX2-203ENST00000441443 RAB21Q9UL25 225 aa23.14■■□□□ 1.29
SHOX2-203ENST00000441443 DENND2AQ9ULE3 1009 aa23.14■■□□□ 1.29
SHOX2-203ENST00000441443 ZNF335Q9H4Z2 1342 aaPredicted RBP23.13■■□□□ 1.29
SHOX2-203ENST00000441443 TEX33O43247 280 aa23.13■■□□□ 1.29
SHOX2-203ENST00000441443 USP5P45974 858 aa23.13■■□□□ 1.29
SHOX2-203ENST00000441443 CASP8Q14790 479 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms