RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 FPGT-TNNI3KV9GXZ4 949 aa13.68□□□□□ -0.22
LTBR-203ENST00000441074 SBF2Q86WG5 1849 aa13.67□□□□□ -0.22
LTBR-203ENST00000441074 SH3TC1Q8TE82 1336 aa13.67□□□□□ -0.22
LTBR-203ENST00000441074 LMAN1P49257 510 aa13.67□□□□□ -0.22
LTBR-203ENST00000441074 MCMDC2Q4G0Z9 681 aa13.67□□□□□ -0.22
LTBR-203ENST00000441074 ZNF609O15014 1411 aa13.67□□□□□ -0.22
LTBR-203ENST00000441074 SALL1Q9NSC2 1324 aa13.67□□□□□ -0.22
LTBR-203ENST00000441074 ITGB4P16144 1822 aa13.67□□□□□ -0.22
LTBR-203ENST00000441074 MAP2K7O14733 419 aa13.67□□□□□ -0.22
LTBR-203ENST00000441074 ARHGAP6O43182 974 aa13.67□□□□□ -0.22
LTBR-203ENST00000441074 CHGBP05060 677 aa13.67□□□□□ -0.22
LTBR-203ENST00000441074 IVLP07476 585 aa13.67□□□□□ -0.22
LTBR-203ENST00000441074 CYP21A2P08686 494 aa13.67□□□□□ -0.22
LTBR-203ENST00000441074 LMOD1P29536 600 aaPredicted RBP13.67□□□□□ -0.22
LTBR-203ENST00000441074 BRD3Q15059 726 aa13.67□□□□□ -0.22
LTBR-203ENST00000441074 GIGYF2Q6Y7W6 1299 aaKnown RBP13.67□□□□□ -0.22
LTBR-203ENST00000441074 LINC00301Q8NCQ3 95 aa13.67□□□□□ -0.22
LTBR-203ENST00000441074 HAUS7Q99871 368 aa13.67□□□□□ -0.22
LTBR-203ENST00000441074 DBNLQ9UJU6 430 aaKnown RBP13.67□□□□□ -0.22
LTBR-203ENST00000441074 PPP2R2CQ9Y2T4 447 aa13.67□□□□□ -0.22
LTBR-203ENST00000441074 CCDC151A5D8V7 595 aa13.66□□□□□ -0.22
LTBR-203ENST00000441074 APBA3O96018 575 aa13.66□□□□□ -0.22
LTBR-203ENST00000441074 UBASH3AP57075 661 aa13.66□□□□□ -0.22
LTBR-203ENST00000441074 GNL2Q13823 731 aaKnown RBP13.66□□□□□ -0.22
LTBR-203ENST00000441074 LONRF2Q1L5Z9 754 aa13.66□□□□□ -0.22
LTBR-203ENST00000441074 DHX32Q7L7V1 743 aaKnown RBP13.66□□□□□ -0.22
LTBR-203ENST00000441074 KCNG4Q8TDN1 519 aa13.66□□□□□ -0.22
LTBR-203ENST00000441074 GOLGA1Q92805 767 aa13.66□□□□□ -0.22
LTBR-203ENST00000441074 HSD3B7Q9H2F3 369 aa13.66□□□□□ -0.22
LTBR-203ENST00000441074 UBN2Q6ZU65 1347 aa13.66□□□□□ -0.22
LTBR-203ENST00000441074 H3BQF6 201 aa13.65□□□□□ -0.22
LTBR-203ENST00000441074 BIN1O00499 593 aa13.65□□□□□ -0.22
LTBR-203ENST00000441074 TXLNAP40222 546 aa13.65□□□□□ -0.22
LTBR-203ENST00000441074 NLRP10Q86W26 655 aa13.65□□□□□ -0.22
LTBR-203ENST00000441074 VSTM4Q8IW00 320 aa13.65□□□□□ -0.22
LTBR-203ENST00000441074 GOLGA6L1Q8N7Z2 621 aa13.65□□□□□ -0.22
LTBR-203ENST00000441074 LRRC2Q9BYS8 371 aa13.65□□□□□ -0.22
LTBR-203ENST00000441074 MYO1BO43795 1136 aa13.65□□□□□ -0.22
LTBR-203ENST00000441074 RPS6KA5O75582 802 aa13.65□□□□□ -0.22
LTBR-203ENST00000441074 YEATS4O95619 227 aa13.65□□□□□ -0.22
LTBR-203ENST00000441074 ATP1A3P13637 1013 aa13.65□□□□□ -0.22
LTBR-203ENST00000441074 GYS2P54840 703 aa13.65□□□□□ -0.22
LTBR-203ENST00000441074 GNG11P61952 73 aa13.65□□□□□ -0.22
LTBR-203ENST00000441074 TIMM10P62072 90 aa13.65□□□□□ -0.22
LTBR-203ENST00000441074 STK38Q15208 465 aa13.65□□□□□ -0.22
LTBR-203ENST00000441074 SF3A1Q15459 793 aaKnown RBP13.65□□□□□ -0.22
LTBR-203ENST00000441074 NOM1Q5C9Z4 860 aaKnown RBP13.65□□□□□ -0.22
LTBR-203ENST00000441074 TMEM139Q8IV31 216 aa13.65□□□□□ -0.22
LTBR-203ENST00000441074 MSL3Q8N5Y2 521 aaKnown RBP13.65□□□□□ -0.22
LTBR-203ENST00000441074 LINC00116Q8NCU8 138 aa13.65□□□□□ -0.22
LTBR-203ENST00000441074 WDR24Q96S15 920 aa13.65□□□□□ -0.22
LTBR-203ENST00000441074 AGXT2Q9BYV1 514 aa13.65□□□□□ -0.22
LTBR-203ENST00000441074 CCDC87Q9NVE4 849 aa13.65□□□□□ -0.22
LTBR-203ENST00000441074 ARFGEF2Q9Y6D5 1785 aa13.65□□□□□ -0.23
LTBR-203ENST00000441074 ZNF202O95125 648 aa13.64□□□□□ -0.23
LTBR-203ENST00000441074 EIF5P55010 431 aaKnown RBP13.64□□□□□ -0.23
LTBR-203ENST00000441074 APOBRQ0VD83 1088 aa13.64□□□□□ -0.23
LTBR-203ENST00000441074 SF3B2Q13435 895 aaKnown RBP13.64□□□□□ -0.23
LTBR-203ENST00000441074 LEKR1Q6ZMV7 388 aa13.64□□□□□ -0.23
LTBR-203ENST00000441074 AMIGO3Q86WK7 504 aa13.64□□□□□ -0.23
LTBR-203ENST00000441074 HNRNPLLQ8WVV9 542 aaKnown RBP13.64□□□□□ -0.23
LTBR-203ENST00000441074 TRMT112Q9UI30 125 aaKnown RBP13.64□□□□□ -0.23
LTBR-203ENST00000441074 SERPINC1P01008 464 aa13.64□□□□□ -0.23
LTBR-203ENST00000441074 TOP1P11387 765 aaKnown RBP13.64□□□□□ -0.23
LTBR-203ENST00000441074 GUCY1B3Q02153 619 aa13.64□□□□□ -0.23
LTBR-203ENST00000441074 ICE2Q659A1 982 aa13.64□□□□□ -0.23
LTBR-203ENST00000441074 ATG9AQ7Z3C6 839 aa13.64□□□□□ -0.23
LTBR-203ENST00000441074 CERS3Q8IU89 383 aa13.64□□□□□ -0.23
LTBR-203ENST00000441074 KBTBD3Q8NAB2 608 aa13.64□□□□□ -0.23
LTBR-203ENST00000441074 DPF2Q92785 391 aa13.64□□□□□ -0.23
LTBR-203ENST00000441074 DSCC1Q9BVC3 393 aa13.64□□□□□ -0.23
LTBR-203ENST00000441074 HELLSQ9NRZ9 838 aa13.64□□□□□ -0.23
LTBR-203ENST00000441074 POLR3EQ9NVU0 708 aa13.64□□□□□ -0.23
LTBR-203ENST00000441074 NHSQ6T4R5 1651 aa13.64□□□□□ -0.23
LTBR-203ENST00000441074 LAMB4A4D0S4 1761 aa13.64□□□□□ -0.23
LTBR-203ENST00000441074 AFDNP55196 1824 aaKnown RBP13.64□□□□□ -0.23
LTBR-203ENST00000441074 SPTLC2O15270 562 aa13.63□□□□□ -0.23
LTBR-203ENST00000441074 IL6STP40189 918 aaPredicted RBP13.63□□□□□ -0.23
LTBR-203ENST00000441074 CCT2P78371 535 aaKnown RBP13.63□□□□□ -0.23
LTBR-203ENST00000441074 EXOSC10Q01780 885 aaKnown RBP13.63□□□□□ -0.23
LTBR-203ENST00000441074 STOX1Q6ZVD7 989 aa13.63□□□□□ -0.23
LTBR-203ENST00000441074 FAM177A1Q8N128 213 aaPredicted RBP13.63□□□□□ -0.23
LTBR-203ENST00000441074 UPF1Q92900 1129 aaKnown RBP eCLIP13.63□□□□□ -0.232e-7■■■■■ 33.1
LTBR-203ENST00000441074 KIFC2Q96AC6 838 aa13.63□□□□□ -0.23
LTBR-203ENST00000441074 SEC62Q99442 399 aaKnown RBP13.63□□□□□ -0.23
LTBR-203ENST00000441074 DBNDD2Q9BQY9 259 aa13.63□□□□□ -0.23
LTBR-203ENST00000441074 A0A1B0GUL7 405 aa13.63□□□□□ -0.23
LTBR-203ENST00000441074 MYL5Q02045 173 aa13.63□□□□□ -0.23
LTBR-203ENST00000441074 CFAP100Q494V2 611 aa13.63□□□□□ -0.23
LTBR-203ENST00000441074 ZBTB38Q8NAP3 1195 aaPredicted RBP13.63□□□□□ -0.23
LTBR-203ENST00000441074 ZNF274Q96GC6 653 aaPredicted RBP13.63□□□□□ -0.23
LTBR-203ENST00000441074 NEUROD6Q96NK8 337 aa13.63□□□□□ -0.23
LTBR-203ENST00000441074 CLIC4Q9Y696 253 aa13.63□□□□□ -0.23
LTBR-203ENST00000441074 CARMIL3Q8ND23 1372 aa13.62□□□□□ -0.23
LTBR-203ENST00000441074 MAGEA9P43362 315 aa13.62□□□□□ -0.23
LTBR-203ENST00000441074 GTF2A1P52655 376 aaPredicted RBP13.62□□□□□ -0.23
LTBR-203ENST00000441074 DEFB132Q7Z7B7 95 aa13.62□□□□□ -0.23
LTBR-203ENST00000441074 GREM2Q9H772 168 aa13.62□□□□□ -0.23
LTBR-203ENST00000441074 GEMIN8Q9NWZ8 242 aaKnown RBP13.62□□□□□ -0.23
LTBR-203ENST00000441074 TUBE1Q9UJT0 475 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms