RNA–Protein interactions for RNA: ENST00000440445.5

AFF3-211, Transcript of AF4/FMR2 family member 3, human

TSL 4

Gene AFF3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AFF3-211	ENST00000440445	NOL9	Q5SY16	702 aa	Known RBP	32.84	■■■□□ 2.85
AFF3-211	ENST00000440445	RAI14	Q9P0K7	980 aa		32.84	■■■□□ 2.85
AFF3-211	ENST00000440445	ZCCHC17	Q9NP64	241 aa	Known RBP	32.83	■■■□□ 2.85
AFF3-211	ENST00000440445	DDX4	Q9NQI0	724 aa	Known RBP	32.83	■■■□□ 2.85
AFF3-211	ENST00000440445	LRP2BP	Q9P2M1	347 aa		32.83	■■■□□ 2.85
AFF3-211	ENST00000440445	RCAN3	Q9UKA8	241 aa		32.83	■■■□□ 2.85
AFF3-211	ENST00000440445	HPS5	Q9UPZ3	1129 aa		32.83	■■■□□ 2.85
AFF3-211	ENST00000440445	IGSF3	O75054	1194 aa		32.82	■■■□□ 2.84
AFF3-211	ENST00000440445	FBXO46	Q6PJ61	603 aa	Predicted RBP	32.82	■■■□□ 2.84
AFF3-211	ENST00000440445	DBNL	Q9UJU6	430 aa	Known RBP	32.82	■■■□□ 2.84
AFF3-211	ENST00000440445	DDX19B	Q9UMR2	479 aa		32.82	■■■□□ 2.84
AFF3-211	ENST00000440445	MAP3K10	Q02779	954 aa		32.81	■■■□□ 2.84
AFF3-211	ENST00000440445	SH3BP5L	Q7L8J4	393 aa		32.81	■■■□□ 2.84
AFF3-211	ENST00000440445	ERC1	Q8IUD2	1116 aa		32.81	■■■□□ 2.84
AFF3-211	ENST00000440445	FAM43A	Q8N2R8	423 aa		32.81	■■■□□ 2.84
AFF3-211	ENST00000440445	ERO1A	Q96HE7	468 aa		32.81	■■■□□ 2.84
AFF3-211	ENST00000440445	TAF1C	Q15572	869 aa	Predicted RBP	32.8	■■■□□ 2.84
AFF3-211	ENST00000440445	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	32.8	■■■□□ 2.84
AFF3-211	ENST00000440445	EAF2	Q96CJ1	260 aa	Predicted RBP	32.8	■■■□□ 2.84
AFF3-211	ENST00000440445	ZFYVE28	Q9HCC9	887 aa		32.8	■■■□□ 2.84
AFF3-211	ENST00000440445	SNRK	Q9NRH2	765 aa		32.8	■■■□□ 2.84
AFF3-211	ENST00000440445	COL2A1	P02458	1487 aa	Predicted RBP	32.8	■■■□□ 2.84
AFF3-211	ENST00000440445	PHF20L1	A8MW92	1017 aa		32.79	■■■□□ 2.84
AFF3-211	ENST00000440445	PICALM	Q13492	652 aa		32.79	■■■□□ 2.84
AFF3-211	ENST00000440445	KCNH4	Q9UQ05	1017 aa		32.79	■■■□□ 2.84
AFF3-211	ENST00000440445	MYO5A	Q9Y4I1	1855 aa	Known RBP	32.78	■■■□□ 2.84
AFF3-211	ENST00000440445	DDTL	A6NHG4	134 aa	Predicted RBP	32.78	■■■□□ 2.84
AFF3-211	ENST00000440445	HSP90AB4P	Q58FF6	505 aa		32.78	■■■□□ 2.84
AFF3-211	ENST00000440445	CYP2E1	P05181	493 aa	Predicted RBP	32.77	■■■□□ 2.84
AFF3-211	ENST00000440445	SP3	Q02447	781 aa		32.77	■■■□□ 2.84
AFF3-211	ENST00000440445	CHMP4B	Q9H444	224 aa	Known RBP	32.77	■■■□□ 2.84
AFF3-211	ENST00000440445	ZBTB40	Q9NUA8	1239 aa		32.77	■■■□□ 2.84
AFF3-211	ENST00000440445	TLR7	Q9NYK1	1049 aa	Known RBP	32.77	■■■□□ 2.84
AFF3-211	ENST00000440445	EXOC6B	Q9Y2D4	811 aa		32.77	■■■□□ 2.84
AFF3-211	ENST00000440445	COG6	Q9Y2V7	657 aa		32.77	■■■□□ 2.84
AFF3-211	ENST00000440445	BTBD19	C9JJ37	291 aa		32.76	■■■□□ 2.83
AFF3-211	ENST00000440445	RPAP2	Q8IXW5	612 aa	Predicted RBP	32.76	■■■□□ 2.83
AFF3-211	ENST00000440445	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	32.76	■■■□□ 2.83
AFF3-211	ENST00000440445	CCDC8	Q9H0W5	538 aa	Predicted RBP	32.76	■■■□□ 2.83
AFF3-211	ENST00000440445	MLLT1	Q03111	559 aa	Predicted RBP	32.75	■■■□□ 2.83
AFF3-211	ENST00000440445	NAA16	Q6N069	864 aa	Predicted RBP	32.75	■■■□□ 2.83
AFF3-211	ENST00000440445	OTOP1	Q7RTM1	612 aa		32.75	■■■□□ 2.83
AFF3-211	ENST00000440445	SCYL3	Q8IZE3	742 aa		32.75	■■■□□ 2.83
AFF3-211	ENST00000440445	NOL10	Q9BSC4	688 aa	Known RBP	32.75	■■■□□ 2.83
AFF3-211	ENST00000440445	TRIM17	Q9Y577	477 aa		32.75	■■■□□ 2.83
AFF3-211	ENST00000440445	DOCK1	Q14185	1865 aa		32.75	■■■□□ 2.83
AFF3-211	ENST00000440445	TBC1D12	O60347	775 aa		32.73	■■■□□ 2.83
AFF3-211	ENST00000440445	HMMR	O75330	724 aa		32.73	■■■□□ 2.83
AFF3-211	ENST00000440445	ZAP70	P43403	619 aa		32.73	■■■□□ 2.83
AFF3-211	ENST00000440445	CD99L2	Q8TCZ2	262 aa		32.73	■■■□□ 2.83
AFF3-211	ENST00000440445	BAG3	O95817	575 aa		32.72	■■■□□ 2.83
AFF3-211	ENST00000440445	PLCG2	P16885	1265 aa		32.72	■■■□□ 2.83
AFF3-211	ENST00000440445	OSBPL5	Q9H0X9	879 aa	Predicted RBP	32.72	■■■□□ 2.83
AFF3-211	ENST00000440445	CDK5RAP2	Q96SN8	1893 aa		32.71	■■■□□ 2.83
AFF3-211	ENST00000440445	CXCL11	O14625	94 aa		32.71	■■■□□ 2.83
AFF3-211	ENST00000440445	TLR2	O60603	784 aa		32.71	■■■□□ 2.83
AFF3-211	ENST00000440445	CTNND1	O60716	968 aa	Known RBP	32.71	■■■□□ 2.83
AFF3-211	ENST00000440445	PPP4C	P60510	307 aa		32.71	■■■□□ 2.83
AFF3-211	ENST00000440445	ANKRD23	Q86SG2	305 aa		32.71	■■■□□ 2.83
AFF3-211	ENST00000440445	AACS	Q86V21	672 aa		32.71	■■■□□ 2.83
AFF3-211	ENST00000440445	TEX11	Q8IYF3	940 aa		32.71	■■■□□ 2.83
AFF3-211	ENST00000440445	PICK1	Q9NRD5	415 aa		32.71	■■■□□ 2.83
AFF3-211	ENST00000440445	FOCAD	Q5VW36	1801 aa		32.71	■■■□□ 2.83
AFF3-211	ENST00000440445	RHPN1	Q8TCX5	695 aa		32.7	■■■□□ 2.83
AFF3-211	ENST00000440445	PIH1D3	Q9NQM4	214 aa	Known RBP	32.7	■■■□□ 2.83
AFF3-211	ENST00000440445	PTPRA	P18433	802 aa		32.69	■■■□□ 2.82
AFF3-211	ENST00000440445	SOX10	P56693	466 aa		32.69	■■■□□ 2.82
AFF3-211	ENST00000440445	PDE3A	Q14432	1141 aa		32.69	■■■□□ 2.82
AFF3-211	ENST00000440445	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	32.69	■■■□□ 2.82
AFF3-211	ENST00000440445	EFCC1	Q9HA90	598 aa		32.69	■■■□□ 2.82
AFF3-211	ENST00000440445	AATF	Q9NY61	560 aa	Known RBP eCLIP	32.69	■■■□□ 2.82
AFF3-211	ENST00000440445	PHIP	Q8WWQ0	1821 aa		32.69	■■■□□ 2.82
AFF3-211	ENST00000440445	MOGS	Q13724	837 aa		32.68	■■■□□ 2.82
AFF3-211	ENST00000440445	ARHGEF6	Q15052	776 aa		32.68	■■■□□ 2.82
AFF3-211	ENST00000440445	ADGRA1	Q86SQ6	560 aa		32.68	■■■□□ 2.82
AFF3-211	ENST00000440445	SIRT2	Q8IXJ6	389 aa		32.68	■■■□□ 2.82
AFF3-211	ENST00000440445	PTPRF	P10586	1907 aa		32.68	■■■□□ 2.82
AFF3-211	ENST00000440445	KIF1BP	Q96EK5	621 aa		32.67	■■■□□ 2.82
AFF3-211	ENST00000440445	PTPN22	Q9Y2R2	807 aa		32.67	■■■□□ 2.82
AFF3-211	ENST00000440445	ZHX2	Q9Y6X8	837 aa		32.67	■■■□□ 2.82
AFF3-211	ENST00000440445	SLURP2	P0DP57	97 aa		32.66	■■■□□ 2.82
AFF3-211	ENST00000440445	CAP1	Q01518	475 aa		32.66	■■■□□ 2.82
AFF3-211	ENST00000440445	TMED8	Q6PL24	325 aa	Predicted RBP	32.66	■■■□□ 2.82
AFF3-211	ENST00000440445	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	32.66	■■■□□ 2.82
AFF3-211	ENST00000440445	IL1RAPL2	Q9NP60	686 aa		32.66	■■■□□ 2.82
AFF3-211	ENST00000440445	PDHX	O00330	501 aa		32.65	■■■□□ 2.82
AFF3-211	ENST00000440445	DHX36	Q9H2U1	1008 aa	Known RBP	32.65	■■■□□ 2.82
AFF3-211	ENST00000440445	AFG3L2	Q9Y4W6	797 aa		32.65	■■■□□ 2.82
AFF3-211	ENST00000440445	HTT	P42858	3142 aa		32.64	■■■□□ 2.82
AFF3-211	ENST00000440445		A0A0G2JLL6	359 aa	Predicted RBP	32.64	■■■□□ 2.82
AFF3-211	ENST00000440445	SIPA1L1	O43166	1804 aa		32.64	■■■□□ 2.82
AFF3-211	ENST00000440445	PRRT2	Q7Z6L0	340 aa	Predicted RBP	32.64	■■■□□ 2.82
AFF3-211	ENST00000440445	CLASRP	Q8N2M8	674 aa	Known RBP	32.64	■■■□□ 2.82
AFF3-211	ENST00000440445	HERC5	Q9UII4	1024 aa	Known RBP	32.64	■■■□□ 2.82
AFF3-211	ENST00000440445	ATAD5	Q96QE3	1844 aa		32.63	■■■□□ 2.81
AFF3-211	ENST00000440445	RAB11FIP3	O75154	756 aa		32.63	■■■□□ 2.81
AFF3-211	ENST00000440445	IDH1	O75874	414 aa	Known RBP	32.63	■■■□□ 2.81
AFF3-211	ENST00000440445	FASTKD5	Q7L8L6	764 aa	Known RBP	32.63	■■■□□ 2.81
AFF3-211	ENST00000440445	CERS3	Q8IU89	383 aa		32.63	■■■□□ 2.81
AFF3-211	ENST00000440445	ADGRA2	Q96PE1	1338 aa		32.62	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 66 ms