RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 FAAP100Q0VG06 881 aa5.42□□□□□ -1.54
HMGB3P11-201ENST00000440127 ARHGAP27Q6ZUM4 889 aa5.42□□□□□ -1.54
HMGB3P11-201ENST00000440127 MISP3Q96FF7 219 aa5.42□□□□□ -1.54
HMGB3P11-201ENST00000440127 CBX8Q9HC52 389 aa5.42□□□□□ -1.54
HMGB3P11-201ENST00000440127 PCOLCE2Q9UKZ9 415 aa5.42□□□□□ -1.54
HMGB3P11-201ENST00000440127 COL17A1Q9UMD9 1497 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P11-201ENST00000440127 RNGTTO60942 597 aaKnown RBP5.41□□□□□ -1.54
HMGB3P11-201ENST00000440127 ECEL1O95672 775 aa5.41□□□□□ -1.54
HMGB3P11-201ENST00000440127 LMNB1P20700 586 aa5.41□□□□□ -1.54
HMGB3P11-201ENST00000440127 ERVK-24P63145 666 aa5.41□□□□□ -1.54
HMGB3P11-201ENST00000440127 MSMPQ1L6U9 139 aa5.41□□□□□ -1.54
HMGB3P11-201ENST00000440127 OGFOD3Q6PK18 319 aa5.41□□□□□ -1.54
HMGB3P11-201ENST00000440127 KCT2Q8NC54 265 aa5.41□□□□□ -1.54
HMGB3P11-201ENST00000440127 FANCD2OSQ96PS1 177 aa5.41□□□□□ -1.54
HMGB3P11-201ENST00000440127 ZC3H12CQ9C0D7 883 aaKnown RBP5.41□□□□□ -1.54
HMGB3P11-201ENST00000440127 LRRC4CQ9HCJ2 640 aa5.41□□□□□ -1.54
HMGB3P11-201ENST00000440127 BAZ1AQ9NRL2 1556 aaPredicted RBP5.41□□□□□ -1.54
HMGB3P11-201ENST00000440127 TRIM37O94972 964 aa5.4□□□□□ -1.54
HMGB3P11-201ENST00000440127 MED26O95402 600 aa5.4□□□□□ -1.54
HMGB3P11-201ENST00000440127 TXKP42681 527 aa5.4□□□□□ -1.54
HMGB3P11-201ENST00000440127 MAP1SQ66K74 1059 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P11-201ENST00000440127 LLGL2Q6P1M3 1020 aa5.4□□□□□ -1.54
HMGB3P11-201ENST00000440127 PI16Q6UXB8 463 aa5.4□□□□□ -1.54
HMGB3P11-201ENST00000440127 ZNF765Q7L2R6 523 aa5.4□□□□□ -1.54
HMGB3P11-201ENST00000440127 FLCNQ8NFG4 579 aa5.4□□□□□ -1.54
HMGB3P11-201ENST00000440127 NECAB3Q96P71 396 aaPredicted RBP5.4□□□□□ -1.54
HMGB3P11-201ENST00000440127 BCL11AQ9H165 835 aa5.4□□□□□ -1.54
HMGB3P11-201ENST00000440127 C12orf49Q9H741 205 aa5.4□□□□□ -1.54
HMGB3P11-201ENST00000440127 PPP1R9AQ9ULJ8 1098 aa5.4□□□□□ -1.54
HMGB3P11-201ENST00000440127 CYP8B1Q9UNU6 501 aa5.4□□□□□ -1.54
HMGB3P11-201ENST00000440127 OAS3Q9Y6K5 1087 aaKnown RBP5.4□□□□□ -1.54
HMGB3P11-201ENST00000440127 KRTAP4-8A0A0G2JLE6 195 aa5.39□□□□□ -1.55
HMGB3P11-201ENST00000440127 FAM170BA6NMN3 283 aa5.39□□□□□ -1.55
HMGB3P11-201ENST00000440127 ZNF862O60290 1169 aa5.39□□□□□ -1.55
HMGB3P11-201ENST00000440127 PRPF40AO75400 957 aaKnown RBP5.39□□□□□ -1.55
HMGB3P11-201ENST00000440127 LDHBP07195 334 aaKnown RBP5.39□□□□□ -1.55
HMGB3P11-201ENST00000440127 EIF4BP23588 611 aaKnown RBP5.39□□□□□ -1.55
HMGB3P11-201ENST00000440127 ADMP35318 185 aa5.39□□□□□ -1.55
HMGB3P11-201ENST00000440127 TPTE2Q6XPS3 522 aa5.39□□□□□ -1.55
HMGB3P11-201ENST00000440127 PDZD3Q86UT5 571 aa5.39□□□□□ -1.55
HMGB3P11-201ENST00000440127 TP53INP2Q8IXH6 220 aa5.39□□□□□ -1.55
HMGB3P11-201ENST00000440127 RNF214Q8ND24 703 aa5.39□□□□□ -1.55
HMGB3P11-201ENST00000440127 C3orf58Q8NDZ4 430 aa5.39□□□□□ -1.55
HMGB3P11-201ENST00000440127 MKNK2Q9HBH9 465 aa5.39□□□□□ -1.55
HMGB3P11-201ENST00000440127 CCDC39Q9UFE4 941 aa5.39□□□□□ -1.55
HMGB3P11-201ENST00000440127 SLC5A6Q9Y289 635 aa5.39□□□□□ -1.55
HMGB3P11-201ENST00000440127 GNA15P30679 374 aa5.38□□□□□ -1.55
HMGB3P11-201ENST00000440127 HOXA10P31260 410 aaPredicted RBP5.38□□□□□ -1.55
HMGB3P11-201ENST00000440127 TTLL4Q14679 1199 aa5.38□□□□□ -1.55
HMGB3P11-201ENST00000440127 SEZ6L2Q6UXD5 910 aa5.38□□□□□ -1.55
HMGB3P11-201ENST00000440127 SND1Q7KZF4 910 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB3P11-201ENST00000440127 SV2BQ7L1I2 683 aa5.38□□□□□ -1.55
HMGB3P11-201ENST00000440127 CDC37L1Q7L3B6 337 aa5.38□□□□□ -1.55
HMGB3P11-201ENST00000440127 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.38□□□□□ -1.55
HMGB3P11-201ENST00000440127 GATA6Q92908 595 aa5.38□□□□□ -1.55
HMGB3P11-201ENST00000440127 DISC1Q9NRI5 854 aa5.38□□□□□ -1.55
HMGB3P11-201ENST00000440127 C1GALT1Q9NS00 363 aa5.38□□□□□ -1.55
HMGB3P11-201ENST00000440127 GTF2IRD1Q9UHL9 959 aa5.38□□□□□ -1.55
HMGB3P11-201ENST00000440127 TTF2Q9UNY4 1162 aaKnown RBP5.38□□□□□ -1.55
HMGB3P11-201ENST00000440127 WIZO95785 1651 aa5.37□□□□□ -1.55
HMGB3P11-201ENST00000440127 LOC105371045A0A1W2PR82 267 aa5.37□□□□□ -1.55
HMGB3P11-201ENST00000440127 FANCGO15287 622 aa5.37□□□□□ -1.55
HMGB3P11-201ENST00000440127 USP17L7P0C7H9 530 aa5.37□□□□□ -1.55
HMGB3P11-201ENST00000440127 FAM87AP0C7U9 286 aa5.37□□□□□ -1.55
HMGB3P11-201ENST00000440127 RLBP1P12271 317 aa5.37□□□□□ -1.55
HMGB3P11-201ENST00000440127 HCLS1P14317 486 aaPredicted RBP5.37□□□□□ -1.55
HMGB3P11-201ENST00000440127 ZNF252P-AS1Q0IIN9 211 aa5.37□□□□□ -1.55
HMGB3P11-201ENST00000440127 ZC3H12AQ5D1E8 599 aaKnown RBP5.37□□□□□ -1.55
HMGB3P11-201ENST00000440127 NETO1Q8TDF5 533 aa5.37□□□□□ -1.55
HMGB3P11-201ENST00000440127 GPBAR1Q8TDU6 330 aa5.37□□□□□ -1.55
HMGB3P11-201ENST00000440127 ELMO3Q96BJ8 720 aa5.37□□□□□ -1.55
HMGB3P11-201ENST00000440127 PCDHGC5Q9Y5F6 944 aa5.37□□□□□ -1.55
HMGB3P11-201ENST00000440127 BIN1O00499 593 aa5.36□□□□□ -1.55
HMGB3P11-201ENST00000440127 ENC1O14682 589 aa5.36□□□□□ -1.55
HMGB3P11-201ENST00000440127 P4HBP07237 508 aaKnown RBP5.36□□□□□ -1.55
HMGB3P11-201ENST00000440127 EAPPQ56P03 285 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P11-201ENST00000440127 HDXQ7Z353 690 aa5.36□□□□□ -1.55
HMGB3P11-201ENST00000440127 WDR89Q96FK6 387 aaPredicted RBP5.36□□□□□ -1.55
HMGB3P11-201ENST00000440127 TMEM265A0A087WTH1 108 aa5.35□□□□□ -1.55
HMGB3P11-201ENST00000440127 YBX3P16989 372 aaKnown RBP eCLIP5.35□□□□□ -1.55
HMGB3P11-201ENST00000440127 JUNBP17275 347 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P11-201ENST00000440127 TAL1P17542 331 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P11-201ENST00000440127 ERCC3P19447 782 aa5.35□□□□□ -1.55
HMGB3P11-201ENST00000440127 CDK5R2Q13319 367 aa5.35□□□□□ -1.55
HMGB3P11-201ENST00000440127 IFI16Q16666 785 aaKnown RBP5.35□□□□□ -1.55
HMGB3P11-201ENST00000440127 PCNX4Q63HM2 1172 aa5.35□□□□□ -1.55
HMGB3P11-201ENST00000440127 ZNF746Q6NUN9 644 aaPredicted RBP5.35□□□□□ -1.55
HMGB3P11-201ENST00000440127 AEBP1Q8IUX7 1158 aa5.35□□□□□ -1.55
HMGB3P11-201ENST00000440127 ISL2Q96A47 359 aa5.35□□□□□ -1.55
HMGB3P11-201ENST00000440127 LGR6Q9HBX8 967 aa5.35□□□□□ -1.55
HMGB3P11-201ENST00000440127 ZC3H7BQ9UGR2 993 aaKnown RBP5.35□□□□□ -1.55
HMGB3P11-201ENST00000440127 PCDHA4Q9UN74 947 aa5.35□□□□□ -1.55
HMGB3P11-201ENST00000440127 SMARCA4P51532 1647 aa5.34□□□□□ -1.55
HMGB3P11-201ENST00000440127 GNAT3A8MTJ3 354 aa5.34□□□□□ -1.55
HMGB3P11-201ENST00000440127 DYNC1LI2O43237 492 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P11-201ENST00000440127 RPS26P62854 115 aaKnown RBP5.34□□□□□ -1.55
HMGB3P11-201ENST00000440127 CCDC85BQ15834 202 aaPredicted RBP5.34□□□□□ -1.55
HMGB3P11-201ENST00000440127 ABI1Q8IZP0 508 aa5.34□□□□□ -1.55
HMGB3P11-201ENST00000440127 ZNF507Q8TCN5 953 aa5.34□□□□□ -1.55
HMGB3P11-201ENST00000440127 ASIC4Q96FT7 647 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms