RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 GOLGA8AA7E2F4 631 aa13.76□□□□□ -0.21
SMAD3-202ENST00000439724 UFL1O94874 794 aa13.76□□□□□ -0.21
SMAD3-202ENST00000439724 APBA3O96018 575 aa13.76□□□□□ -0.21
SMAD3-202ENST00000439724 ADD1P35611 737 aaKnown RBP13.76□□□□□ -0.21
SMAD3-202ENST00000439724 NASPP49321 788 aaPredicted RBP13.76□□□□□ -0.21
SMAD3-202ENST00000439724 COL23A1Q86Y22 540 aaPredicted RBP13.76□□□□□ -0.21
SMAD3-202ENST00000439724 DZIP1Q86YF9 867 aaKnown RBP13.76□□□□□ -0.21
SMAD3-202ENST00000439724 RAB11FIP4Q86YS3 637 aa13.76□□□□□ -0.21
SMAD3-202ENST00000439724 TMTC2Q8N394 836 aa13.76□□□□□ -0.21
SMAD3-202ENST00000439724 ESR2Q92731 530 aa13.76□□□□□ -0.21
SMAD3-202ENST00000439724 C8orf76Q96K31 380 aa13.76□□□□□ -0.21
SMAD3-202ENST00000439724 ATP8A2Q9NTI2 1148 aa13.76□□□□□ -0.21
SMAD3-202ENST00000439724 TFIP11Q9UBB9 837 aaKnown RBP13.76□□□□□ -0.21
SMAD3-202ENST00000439724 GGA1Q9UJY5 639 aa13.76□□□□□ -0.21
SMAD3-202ENST00000439724 SLC12A7Q9Y666 1083 aa13.76□□□□□ -0.21
SMAD3-202ENST00000439724 ERICH2A1L162 156 aa13.75□□□□□ -0.21
SMAD3-202ENST00000439724 MINDY4BA8MYZ0 360 aa13.75□□□□□ -0.21
SMAD3-202ENST00000439724 LDHBP07195 334 aaKnown RBP13.75□□□□□ -0.21
SMAD3-202ENST00000439724 CDC27P30260 824 aa13.75□□□□□ -0.21
SMAD3-202ENST00000439724 FOSBP53539 338 aa13.75□□□□□ -0.21
SMAD3-202ENST00000439724 WTAPQ15007 396 aa13.75□□□□□ -0.21
SMAD3-202ENST00000439724 RRP12Q5JTH9 1297 aaKnown RBP13.75□□□□□ -0.21
SMAD3-202ENST00000439724 CTR9Q6PD62 1173 aa13.75□□□□□ -0.21
SMAD3-202ENST00000439724 MICU3Q86XE3 530 aa13.75□□□□□ -0.21
SMAD3-202ENST00000439724 FBXO18Q8NFZ0 1043 aa13.75□□□□□ -0.21
SMAD3-202ENST00000439724 ZNF396Q96N95 335 aaPredicted RBP13.75□□□□□ -0.21
SMAD3-202ENST00000439724 RBSNQ9H1K0 784 aa13.75□□□□□ -0.21
SMAD3-202ENST00000439724 TOMM22Q9NS69 142 aa13.75□□□□□ -0.21
SMAD3-202ENST00000439724 MYH2Q9UKX2 1941 aa13.75□□□□□ -0.21
SMAD3-202ENST00000439724 STK36Q9NRP7 1315 aa13.75□□□□□ -0.21
SMAD3-202ENST00000439724 IL1R1P14778 569 aa13.74□□□□□ -0.21
SMAD3-202ENST00000439724 RXRBP28702 533 aa13.74□□□□□ -0.21
SMAD3-202ENST00000439724 GSTO1P78417 241 aa13.74□□□□□ -0.21
SMAD3-202ENST00000439724 NTRK3Q16288 839 aa13.74□□□□□ -0.21
SMAD3-202ENST00000439724 SBK1Q52WX2 424 aa13.74□□□□□ -0.21
SMAD3-202ENST00000439724 SYNE3Q6ZMZ3 975 aa13.74□□□□□ -0.21
SMAD3-202ENST00000439724 TSPY26PQ9H489 355 aa13.74□□□□□ -0.21
SMAD3-202ENST00000439724 CD209Q9NNX6 404 aa13.74□□□□□ -0.21
SMAD3-202ENST00000439724 DCP1AQ9NPI6 582 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-202ENST00000439724 FAM217BQ9NTX9 383 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-202ENST00000439724 AATFQ9NY61 560 aaKnown RBP eCLIP13.74□□□□□ -0.21
SMAD3-202ENST00000439724 ARPP21Q9UBL0 812 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-202ENST00000439724 COL11A2P13942 1736 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-202ENST00000439724 ORC4O43929 436 aa13.74□□□□□ -0.21
SMAD3-202ENST00000439724 PPFIA3O75145 1194 aa13.74□□□□□ -0.21
SMAD3-202ENST00000439724 GUCY1B3Q02153 619 aa13.74□□□□□ -0.21
SMAD3-202ENST00000439724 SEC23AQ15436 765 aa13.74□□□□□ -0.21
SMAD3-202ENST00000439724 ILDR1Q86SU0 546 aaPredicted RBP13.74□□□□□ -0.21
SMAD3-202ENST00000439724 SP8Q8IXZ3 490 aa13.74□□□□□ -0.21
SMAD3-202ENST00000439724 UBAC1Q9BSL1 405 aa13.74□□□□□ -0.21
SMAD3-202ENST00000439724 RCOR1Q9UKL0 485 aa13.74□□□□□ -0.21
SMAD3-202ENST00000439724 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.74□□□□□ -0.21
SMAD3-202ENST00000439724 NAV1Q8NEY1 1877 aa13.73□□□□□ -0.21
SMAD3-202ENST00000439724 USP17L12C9JPN9 530 aa13.73□□□□□ -0.21
SMAD3-202ENST00000439724 USP17L21D6R901 530 aa13.73□□□□□ -0.21
SMAD3-202ENST00000439724 PPEF1O14829 653 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-202ENST00000439724 LDHCP07864 332 aa13.73□□□□□ -0.21
SMAD3-202ENST00000439724 IFNAR1P17181 557 aa13.73□□□□□ -0.21
SMAD3-202ENST00000439724 RXRAP19793 462 aa13.73□□□□□ -0.21
SMAD3-202ENST00000439724 NT5C2P49902 561 aa13.73□□□□□ -0.21
SMAD3-202ENST00000439724 PPP4CP60510 307 aa13.73□□□□□ -0.21
SMAD3-202ENST00000439724 BRAPQ7Z569 592 aa13.73□□□□□ -0.21
SMAD3-202ENST00000439724 CERS3Q8IU89 383 aa13.73□□□□□ -0.21
SMAD3-202ENST00000439724 TBC1D16Q8TBP0 767 aa13.73□□□□□ -0.21
SMAD3-202ENST00000439724 PGBD1Q96JS3 809 aa13.73□□□□□ -0.21
SMAD3-202ENST00000439724 GPR101Q96P66 508 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-202ENST00000439724 JAG2Q9Y219 1238 aa13.73□□□□□ -0.21
SMAD3-202ENST00000439724 CYP2D7A0A087X1C5 515 aa13.72□□□□□ -0.21
SMAD3-202ENST00000439724 GOLGA6L4A6NEF3 574 aa13.72□□□□□ -0.21
SMAD3-202ENST00000439724 RANBP6O60518 1105 aaKnown RBP13.72□□□□□ -0.21
SMAD3-202ENST00000439724 NPR1P16066 1061 aa13.72□□□□□ -0.21
SMAD3-202ENST00000439724 IARSP41252 1262 aaKnown RBP13.72□□□□□ -0.21
SMAD3-202ENST00000439724 PPP2R5BQ15173 497 aa13.72□□□□□ -0.21
SMAD3-202ENST00000439724 RTN1Q16799 776 aa13.72□□□□□ -0.21
SMAD3-202ENST00000439724 ZNF654Q8IZM8 581 aa13.72□□□□□ -0.21
SMAD3-202ENST00000439724 USP28Q96RU2 1077 aa13.72□□□□□ -0.21
SMAD3-202ENST00000439724 ZKSCAN3Q9BRR0 538 aa13.72□□□□□ -0.21
SMAD3-202ENST00000439724 ALG1Q9BT22 464 aa13.72□□□□□ -0.21
SMAD3-202ENST00000439724 MYL10Q9BUA6 226 aa13.72□□□□□ -0.21
SMAD3-202ENST00000439724 POLLQ9UGP5 575 aa13.72□□□□□ -0.21
SMAD3-202ENST00000439724 MKRN1Q9UHC7 482 aaKnown RBP13.72□□□□□ -0.21
SMAD3-202ENST00000439724 ATP6V0A2Q9Y487 856 aa13.72□□□□□ -0.21
SMAD3-202ENST00000439724 TNKSO95271 1327 aa13.72□□□□□ -0.21
SMAD3-202ENST00000439724 CDK5RAP2Q96SN8 1893 aa13.71□□□□□ -0.21
SMAD3-202ENST00000439724 CCDC196A0A1B0GTZ2 297 aa13.71□□□□□ -0.21
SMAD3-202ENST00000439724 SMIM22K7EJ46 135 aa13.71□□□□□ -0.21
SMAD3-202ENST00000439724 FMNL1O95466 1100 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-202ENST00000439724 SLC3A2P08195 630 aaKnown RBP13.71□□□□□ -0.21
SMAD3-202ENST00000439724 SRGNP10124 158 aa13.71□□□□□ -0.21
SMAD3-202ENST00000439724 LIG1P18858 919 aa13.71□□□□□ -0.21
SMAD3-202ENST00000439724 KIF23Q02241 960 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-202ENST00000439724 CCDC173Q0VFZ6 552 aa13.71□□□□□ -0.21
SMAD3-202ENST00000439724 OTUD7BQ6GQQ9 843 aa13.71□□□□□ -0.21
SMAD3-202ENST00000439724 STK11IPQ8N1F8 1099 aa13.71□□□□□ -0.21
SMAD3-202ENST00000439724 ANP32BQ92688 251 aaKnown RBP13.71□□□□□ -0.21
SMAD3-202ENST00000439724 PPP1R9BQ96SB3 815 aa13.71□□□□□ -0.21
SMAD3-202ENST00000439724 ZSCAN10Q96SZ4 725 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-202ENST00000439724 DDX19AQ9NUU7 478 aaKnown RBP13.71□□□□□ -0.21
SMAD3-202ENST00000439724 MROH7-TTC4A0A0A0MT08 1334 aa13.71□□□□□ -0.21
SMAD3-202ENST00000439724 ROBO3Q96MS0 1386 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms