RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 CBX1P83916 185 aa17.79■□□□□ 0.44
PTPN13-204ENST00000436978 GPHNQ9NQX3 736 aaPredicted RBP17.79■□□□□ 0.44
PTPN13-204ENST00000436978 NIM1KQ8IY84 436 aa17.79■□□□□ 0.44
PTPN13-204ENST00000436978 SPATA5Q8NB90 893 aa17.79■□□□□ 0.44
PTPN13-204ENST00000436978 CDC42BPAQ5VT25 1732 aa17.79■□□□□ 0.44
PTPN13-204ENST00000436978 GPAA1O43292 621 aa17.79■□□□□ 0.44
PTPN13-204ENST00000436978 SPATA24Q86W54 205 aa17.79■□□□□ 0.44
PTPN13-204ENST00000436978 IVNS1ABPQ9Y6Y0 642 aa17.79■□□□□ 0.44
PTPN13-204ENST00000436978 KRT5P13647 590 aa17.78■□□□□ 0.44
PTPN13-204ENST00000436978 HSP90AA4PQ58FG1 418 aa17.78■□□□□ 0.44
PTPN13-204ENST00000436978 FLAD1Q8NFF5 587 aa17.78■□□□□ 0.44
PTPN13-204ENST00000436978 ARMT1Q9H993 441 aa17.78■□□□□ 0.44
PTPN13-204ENST00000436978 FAM160A1Q05DH4 1040 aa17.78■□□□□ 0.44
PTPN13-204ENST00000436978 ZKSCAN3Q9BRR0 538 aa17.78■□□□□ 0.44
PTPN13-204ENST00000436978 ZBED4O75132 1171 aa17.78■□□□□ 0.44
PTPN13-204ENST00000436978 ARL1P40616 181 aaPredicted RBP17.78■□□□□ 0.44
PTPN13-204ENST00000436978 HSPA2P54652 639 aa17.78■□□□□ 0.44
PTPN13-204ENST00000436978 KCNG1Q9UIX4 513 aa17.78■□□□□ 0.44
PTPN13-204ENST00000436978 FAM135BQ49AJ0 1406 aa17.78■□□□□ 0.44
PTPN13-204ENST00000436978 PPP1R7Q15435 360 aa17.78■□□□□ 0.44
PTPN13-204ENST00000436978 ODF2LQ9ULJ1 636 aa17.78■□□□□ 0.44
PTPN13-204ENST00000436978 TNNC1P63316 161 aa17.78■□□□□ 0.44
PTPN13-204ENST00000436978 AATFQ9NY61 560 aaKnown RBP eCLIP17.78■□□□□ 0.44
PTPN13-204ENST00000436978 DNAI1Q9UI46 699 aa17.78■□□□□ 0.44
PTPN13-204ENST00000436978 B4E1Z4 1266 aa17.78■□□□□ 0.44
PTPN13-204ENST00000436978 MYOM2P54296 1465 aa17.78■□□□□ 0.44
PTPN13-204ENST00000436978 KDRP35968 1356 aa17.78■□□□□ 0.44
PTPN13-204ENST00000436978 TMEM2Q9UHN6 1383 aa17.78■□□□□ 0.44
PTPN13-204ENST00000436978 CFAP58Q5T655 872 aa17.78■□□□□ 0.44
PTPN13-204ENST00000436978 PAIP2Q9BPZ3 127 aaKnown RBP17.78■□□□□ 0.44
PTPN13-204ENST00000436978 ADCY10Q96PN6 1610 aa17.77■□□□□ 0.44
PTPN13-204ENST00000436978 ADCY7P51828 1080 aa17.77■□□□□ 0.44
PTPN13-204ENST00000436978 GCKRQ14397 625 aa17.77■□□□□ 0.44
PTPN13-204ENST00000436978 C8orf34Q49A92 452 aa17.77■□□□□ 0.44
PTPN13-204ENST00000436978 BIN2Q9UBW5 565 aaPredicted RBP17.77■□□□□ 0.44
PTPN13-204ENST00000436978 SAMD9LQ8IVG5 1584 aa17.77■□□□□ 0.44
PTPN13-204ENST00000436978 GJC1P36383 396 aa17.77■□□□□ 0.44
PTPN13-204ENST00000436978 ZBTB7BO15156 539 aaPredicted RBP17.77■□□□□ 0.44
PTPN13-204ENST00000436978 CLUL1Q15846 466 aa17.77■□□□□ 0.44
PTPN13-204ENST00000436978 LARGE2Q8N3Y3 721 aa17.77■□□□□ 0.44
PTPN13-204ENST00000436978 USP21Q9UK80 565 aa17.77■□□□□ 0.44
PTPN13-204ENST00000436978 RXRAP19793 462 aa17.77■□□□□ 0.44
PTPN13-204ENST00000436978 IVLP07476 585 aa17.77■□□□□ 0.43
PTPN13-204ENST00000436978 PLCB3Q01970 1234 aa17.77■□□□□ 0.43
PTPN13-204ENST00000436978 CDC42BPBQ9Y5S2 1711 aa17.77■□□□□ 0.43
PTPN13-204ENST00000436978 KRT25Q7Z3Z0 450 aa17.77■□□□□ 0.43
PTPN13-204ENST00000436978 ZSWIM4Q9H7M6 989 aa17.77■□□□□ 0.43
PTPN13-204ENST00000436978 AKR1B15C9JRZ8 316 aaPredicted RBP17.77■□□□□ 0.43
PTPN13-204ENST00000436978 HS1BP3Q53T59 392 aa17.76■□□□□ 0.43
PTPN13-204ENST00000436978 LIN9Q5TKA1 542 aa17.76■□□□□ 0.43
PTPN13-204ENST00000436978 CCDC63Q8NA47 563 aa17.76■□□□□ 0.43
PTPN13-204ENST00000436978 ATP7BP35670 1465 aa17.76■□□□□ 0.43
PTPN13-204ENST00000436978 ZNF174Q15697 407 aa17.76■□□□□ 0.43
PTPN13-204ENST00000436978 ARPP21Q9UBL0 812 aaPredicted RBP17.76■□□□□ 0.43
PTPN13-204ENST00000436978 NOD1Q9Y239 953 aa17.76■□□□□ 0.43
PTPN13-204ENST00000436978 ATP5DP30049 168 aa17.76■□□□□ 0.43
PTPN13-204ENST00000436978 MYL5Q02045 173 aa17.76■□□□□ 0.43
PTPN13-204ENST00000436978 HSPA4P34932 840 aa17.76■□□□□ 0.43
PTPN13-204ENST00000436978 TRPC3Q13507 836 aa17.76■□□□□ 0.43
PTPN13-204ENST00000436978 MCTP2Q6DN12 878 aa17.76■□□□□ 0.43
PTPN13-204ENST00000436978 GABPB2Q8TAK5 448 aaPredicted RBP17.76■□□□□ 0.43
PTPN13-204ENST00000436978 AGTPBP1Q9UPW5 1226 aa17.76■□□□□ 0.43
PTPN13-204ENST00000436978 UGGT1Q9NYU2 1555 aa17.76■□□□□ 0.43
PTPN13-204ENST00000436978 SYNRGQ9UMZ2 1314 aa17.76■□□□□ 0.43
PTPN13-204ENST00000436978 SLC1A4P43007 532 aa17.76■□□□□ 0.43
PTPN13-204ENST00000436978 NOLC1Q14978 699 aaKnown RBP eCLIP17.76■□□□□ 0.43
PTPN13-204ENST00000436978 NDC80O14777 642 aa17.75■□□□□ 0.43
PTPN13-204ENST00000436978 CUTAO60888 179 aa17.75■□□□□ 0.43
PTPN13-204ENST00000436978 CALCRLQ16602 461 aa17.75■□□□□ 0.43
PTPN13-204ENST00000436978 FAM98CQ17RN3 349 aaKnown RBP17.75■□□□□ 0.43
PTPN13-204ENST00000436978 NOC4LQ9BVI4 516 aaKnown RBP17.75■□□□□ 0.43
PTPN13-204ENST00000436978 NUP58Q9BVL2 599 aa17.75■□□□□ 0.43
PTPN13-204ENST00000436978 TRIM6Q9C030 488 aaPredicted RBP17.75■□□□□ 0.43
PTPN13-204ENST00000436978 CTSWP56202 376 aa17.75■□□□□ 0.43
PTPN13-204ENST00000436978 TNFAIP1Q13829 316 aa17.75■□□□□ 0.43
PTPN13-204ENST00000436978 CCDC26Q8TAB7 109 aa17.75■□□□□ 0.43
PTPN13-204ENST00000436978 CCDC114Q96M63 670 aa17.75■□□□□ 0.43
PTPN13-204ENST00000436978 ARHGEF35A5YM69 484 aa17.75■□□□□ 0.43
PTPN13-204ENST00000436978 TRAF5O00463 557 aa17.75■□□□□ 0.43
PTPN13-204ENST00000436978 ALDH3A1P30838 453 aa17.75■□□□□ 0.43
PTPN13-204ENST00000436978 BIRC3Q13489 604 aa17.75■□□□□ 0.43
PTPN13-204ENST00000436978 GPR161Q8N6U8 529 aaKnown RBP17.75■□□□□ 0.43
PTPN13-204ENST00000436978 SP4Q02446 784 aa17.75■□□□□ 0.43
PTPN13-204ENST00000436978 RAPGEF1Q13905 1077 aa17.75■□□□□ 0.43
PTPN13-204ENST00000436978 CHL1O00533 1208 aa17.75■□□□□ 0.43
PTPN13-204ENST00000436978 STK10O94804 968 aaKnown RBP17.75■□□□□ 0.43
PTPN13-204ENST00000436978 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.75■□□□□ 0.43
PTPN13-204ENST00000436978 KRT222Q8N1A0 295 aa17.75■□□□□ 0.43
PTPN13-204ENST00000436978 KBTBD3Q8NAB2 608 aa17.75■□□□□ 0.43
PTPN13-204ENST00000436978 ANO1Q5XXA6 986 aa17.75■□□□□ 0.43
PTPN13-204ENST00000436978 UBL4BQ8N7F7 174 aa17.74■□□□□ 0.43
PTPN13-204ENST00000436978 SLC5A4Q9NY91 659 aa17.74■□□□□ 0.43
PTPN13-204ENST00000436978 GUCA1BQ9UMX6 200 aa17.74■□□□□ 0.43
PTPN13-204ENST00000436978 CCDC169A6NNP5 214 aa17.74■□□□□ 0.43
PTPN13-204ENST00000436978 RLBP1P12271 317 aa17.74■□□□□ 0.43
PTPN13-204ENST00000436978 CCDC186Q7Z3E2 898 aa17.74■□□□□ 0.43
PTPN13-204ENST00000436978 IFNKQ9P0W0 207 aa17.74■□□□□ 0.43
PTPN13-204ENST00000436978 MXRA7P84157 204 aa17.74■□□□□ 0.43
PTPN13-204ENST00000436978 AZI2Q9H6S1 392 aa17.74■□□□□ 0.43
PTPN13-204ENST00000436978 AS3MTQ9HBK9 375 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms