RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 ROBO3Q96MS0 1386 aa17.88■□□□□ 0.45
TMEM40-204ENST00000435218 FZD9O00144 591 aa17.88■□□□□ 0.45
TMEM40-204ENST00000435218 FGRP09769 529 aa17.88■□□□□ 0.45
TMEM40-204ENST00000435218 NT5C2P49902 561 aa17.88■□□□□ 0.45
TMEM40-204ENST00000435218 TRDNQ13061 729 aa17.88■□□□□ 0.45
TMEM40-204ENST00000435218 TNIP1Q15025 636 aa17.88■□□□□ 0.45
TMEM40-204ENST00000435218 CIAPIN1Q6FI81 312 aa17.88■□□□□ 0.45
TMEM40-204ENST00000435218 APOBEC3HQ6NTF7 200 aaKnown RBP17.88■□□□□ 0.45
TMEM40-204ENST00000435218 MB21D2Q8IYB1 491 aaPredicted RBP17.88■□□□□ 0.45
TMEM40-204ENST00000435218 TEX11Q8IYF3 940 aa17.88■□□□□ 0.45
TMEM40-204ENST00000435218 RNF41Q9H4P4 317 aaPredicted RBP17.88■□□□□ 0.45
TMEM40-204ENST00000435218 USP17L12C9JPN9 530 aa17.87■□□□□ 0.45
TMEM40-204ENST00000435218 USP17L21D6R901 530 aa17.87■□□□□ 0.45
TMEM40-204ENST00000435218 SLC4A3P48751 1232 aa17.87■□□□□ 0.45
TMEM40-204ENST00000435218 PRELPP51888 382 aa17.87■□□□□ 0.45
TMEM40-204ENST00000435218 COL9A3Q14050 684 aaPredicted RBP17.87■□□□□ 0.45
TMEM40-204ENST00000435218 RALYLQ86SE5 291 aaKnown RBP17.87■□□□□ 0.45
TMEM40-204ENST00000435218 FLT1P17948 1338 aa17.86■□□□□ 0.45
TMEM40-204ENST00000435218 NPM3O75607 178 aaKnown RBP17.86■□□□□ 0.45
TMEM40-204ENST00000435218 MCM5P33992 734 aa17.86■□□□□ 0.45
TMEM40-204ENST00000435218 MFSD6Q6ZSS7 791 aa17.86■□□□□ 0.45
TMEM40-204ENST00000435218 TGFBRAP1Q8WUH2 860 aa17.86■□□□□ 0.45
TMEM40-204ENST00000435218 KRT23Q9C075 422 aa17.86■□□□□ 0.45
TMEM40-204ENST00000435218 HDAC9Q9UKV0 1011 aa17.86■□□□□ 0.45
TMEM40-204ENST00000435218 LIMCH1Q9UPQ0 1083 aa17.86■□□□□ 0.45
TMEM40-204ENST00000435218 SIPA1L1O43166 1804 aa17.86■□□□□ 0.45
TMEM40-204ENST00000435218 RPS12P25398 132 aaKnown RBP17.85■□□□□ 0.45
TMEM40-204ENST00000435218 CTDSPL2Q05D32 466 aa17.85■□□□□ 0.45
TMEM40-204ENST00000435218 TOB2Q14106 344 aaPredicted RBP17.85■□□□□ 0.45
TMEM40-204ENST00000435218 C12orf60Q5U649 245 aa17.85■□□□□ 0.45
TMEM40-204ENST00000435218 CDC42EP5Q6NZY7 148 aa17.85■□□□□ 0.45
TMEM40-204ENST00000435218 MTMR14Q8NCE2 650 aa17.85■□□□□ 0.45
TMEM40-204ENST00000435218 TMX3Q96JJ7 454 aa17.85■□□□□ 0.45
TMEM40-204ENST00000435218 ZSCAN31Q96LW9 406 aaPredicted RBP17.85■□□□□ 0.45
TMEM40-204ENST00000435218 MTA3Q9BTC8 594 aa17.85■□□□□ 0.45
TMEM40-204ENST00000435218 MCM9Q9NXL9 1143 aa17.85■□□□□ 0.45
TMEM40-204ENST00000435218 SRCAPQ6ZRS2 3230 aa17.85■□□□□ 0.45
TMEM40-204ENST00000435218 NEDD4P46934 1319 aa17.84■□□□□ 0.45
TMEM40-204ENST00000435218 MINDY4BA8MYZ0 360 aa17.84■□□□□ 0.45
TMEM40-204ENST00000435218 WDHD1O75717 1129 aaPredicted RBP17.84■□□□□ 0.45
TMEM40-204ENST00000435218 LMNB1P20700 586 aa17.84■□□□□ 0.45
TMEM40-204ENST00000435218 CUL4AQ13619 759 aa17.84■□□□□ 0.45
TMEM40-204ENST00000435218 AMOTL1Q8IY63 956 aa17.84■□□□□ 0.45
TMEM40-204ENST00000435218 SH2B1Q9NRF2 756 aaPredicted RBP17.84■□□□□ 0.45
TMEM40-204ENST00000435218 USP40Q9NVE5 1235 aa17.84■□□□□ 0.45
TMEM40-204ENST00000435218 TACC3Q9Y6A5 838 aa17.84■□□□□ 0.45
TMEM40-204ENST00000435218 COL2A1P02458 1487 aaPredicted RBP17.84■□□□□ 0.45
TMEM40-204ENST00000435218 ORC4O43929 436 aa17.83■□□□□ 0.45
TMEM40-204ENST00000435218 SLC3A2P08195 630 aaKnown RBP17.83■□□□□ 0.45
TMEM40-204ENST00000435218 USP17L8P0C7I0 530 aa17.83■□□□□ 0.45
TMEM40-204ENST00000435218 Q6ZUG5 572 aa17.83■□□□□ 0.45
TMEM40-204ENST00000435218 ARHGAP27Q6ZUM4 889 aa17.83■□□□□ 0.45
TMEM40-204ENST00000435218 OGFOD1Q8N543 542 aa17.83■□□□□ 0.45
TMEM40-204ENST00000435218 IDI2Q9BXS1 227 aa17.83■□□□□ 0.45
TMEM40-204ENST00000435218 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.83■□□□□ 0.45
TMEM40-204ENST00000435218 EIF6P56537 245 aaKnown RBP17.82■□□□□ 0.44
TMEM40-204ENST00000435218 EVCP57679 992 aa17.82■□□□□ 0.44
TMEM40-204ENST00000435218 ANTXR2P58335 489 aa17.82■□□□□ 0.44
TMEM40-204ENST00000435218 CFAP100Q494V2 611 aa17.82■□□□□ 0.44
TMEM40-204ENST00000435218 MAPKAPK5Q8IW41 473 aa17.82■□□□□ 0.44
TMEM40-204ENST00000435218 INTS4Q96HW7 963 aaKnown RBP17.82■□□□□ 0.44
TMEM40-204ENST00000435218 TCEANC2Q96MN5 208 aa17.82■□□□□ 0.44
TMEM40-204ENST00000435218 CYP2D7A0A087X1C5 515 aa17.82■□□□□ 0.44
TMEM40-204ENST00000435218 B4E1Z4 1266 aa17.82■□□□□ 0.44
TMEM40-204ENST00000435218 PRC1O43663 620 aa17.82■□□□□ 0.44
TMEM40-204ENST00000435218 PDE4BQ07343 736 aa17.82■□□□□ 0.44
TMEM40-204ENST00000435218 DPF2Q92785 391 aa17.82■□□□□ 0.44
TMEM40-204ENST00000435218 TMEM87BQ96K49 555 aa17.82■□□□□ 0.44
TMEM40-204ENST00000435218 TAOK2Q9UL54 1235 aa17.82■□□□□ 0.44
TMEM40-204ENST00000435218 ZBTB12Q9Y330 459 aaPredicted RBP17.82■□□□□ 0.44
TMEM40-204ENST00000435218 SPDYE2BA6NHP3 402 aa17.81■□□□□ 0.44
TMEM40-204ENST00000435218 SPDYE6P0CI01 402 aa17.81■□□□□ 0.44
TMEM40-204ENST00000435218 YBX3P16989 372 aaKnown RBP eCLIP17.81■□□□□ 0.44
TMEM40-204ENST00000435218 RBM5P52756 815 aaKnown RBP eCLIP17.81■□□□□ 0.44
TMEM40-204ENST00000435218 CYB5R4Q7L1T6 521 aa17.81■□□□□ 0.44
TMEM40-204ENST00000435218 ESR2Q92731 530 aa17.81■□□□□ 0.44
TMEM40-204ENST00000435218 ZBED3Q96IU2 234 aaPredicted RBP17.81■□□□□ 0.44
TMEM40-204ENST00000435218 GREB1LQ9C091 1923 aaPredicted RBP17.8■□□□□ 0.44
TMEM40-204ENST00000435218 CYP2D6P10635 497 aa17.8■□□□□ 0.44
TMEM40-204ENST00000435218 ZNF280AP59817 542 aaPredicted RBP17.8■□□□□ 0.44
TMEM40-204ENST00000435218 OSBPL5Q9H0X9 879 aaPredicted RBP17.8■□□□□ 0.44
TMEM40-204ENST00000435218 DDX4Q9NQI0 724 aaKnown RBP17.8■□□□□ 0.44
TMEM40-204ENST00000435218 ZSWIM5Q9P217 1185 aa17.8■□□□□ 0.44
TMEM40-204ENST00000435218 TPCN1Q9ULQ1 816 aa17.8■□□□□ 0.44
TMEM40-204ENST00000435218 PCDHAC2Q9Y5I4 1007 aa17.8■□□□□ 0.44
TMEM40-204ENST00000435218 SMIM22K7EJ46 135 aa17.79■□□□□ 0.44
TMEM40-204ENST00000435218 KDM4AO75164 1064 aa17.79■□□□□ 0.44
TMEM40-204ENST00000435218 POLR3DP05423 398 aaPredicted RBP17.79■□□□□ 0.44
TMEM40-204ENST00000435218 HSP90AA1P07900 732 aaKnown RBP17.79■□□□□ 0.44
TMEM40-204ENST00000435218 DLGAP5Q15398 846 aa17.79■□□□□ 0.44
TMEM40-204ENST00000435218 TTC6Q86TZ1 520 aa17.79■□□□□ 0.44
TMEM40-204ENST00000435218 BRF1Q92994 677 aa17.79■□□□□ 0.44
TMEM40-204ENST00000435218 PRMT6Q96LA8 375 aaPredicted RBP17.79■□□□□ 0.44
TMEM40-204ENST00000435218 INCENPQ9NQS7 918 aa17.79■□□□□ 0.44
TMEM40-204ENST00000435218 ATRNL1Q5VV63 1379 aa17.78■□□□□ 0.44
TMEM40-204ENST00000435218 ENTPD3O75355 529 aa17.78■□□□□ 0.44
TMEM40-204ENST00000435218 DDIT3P35638 169 aa17.78■□□□□ 0.44
TMEM40-204ENST00000435218 LIFRP42702 1097 aa17.78■□□□□ 0.44
TMEM40-204ENST00000435218 FGD1P98174 961 aa17.78■□□□□ 0.44
TMEM40-204ENST00000435218 ME3Q16798 604 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms