RNA–Protein interactions for RNA: ENST00000434068.1

C1orf228-208, Transcript of Uncharacterized protein C1orf228, human

APPRIS ALT2 TSL 3

Gene C1orf228, Length 490 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf228-208	ENST00000434068	CCDC158	Q5M9N0	1113 aa		13.63	□□□□□ -0.23
C1orf228-208	ENST00000434068	TTC39A	Q5SRH9	613 aa		13.63	□□□□□ -0.23
C1orf228-208	ENST00000434068	NOL9	Q5SY16	702 aa	Known RBP	13.63	□□□□□ -0.23
C1orf228-208	ENST00000434068	CEP85	Q6P2H3	762 aa		13.63	□□□□□ -0.23
C1orf228-208	ENST00000434068	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.63	□□□□□ -0.23
C1orf228-208	ENST00000434068	MIGA2	Q7L4E1	593 aa		13.63	□□□□□ -0.23
C1orf228-208	ENST00000434068	PANK1	Q8TE04	598 aa		13.63	□□□□□ -0.23
C1orf228-208	ENST00000434068	NSUN4	Q96CB9	384 aa	Known RBP	13.63	□□□□□ -0.23
C1orf228-208	ENST00000434068	ERO1A	Q96HE7	468 aa		13.63	□□□□□ -0.23
C1orf228-208	ENST00000434068	ZCCHC17	Q9NP64	241 aa	Known RBP	13.63	□□□□□ -0.23
C1orf228-208	ENST00000434068	ZNF112	Q9UJU3	913 aa		13.63	□□□□□ -0.23
C1orf228-208	ENST00000434068	HPS5	Q9UPZ3	1129 aa		13.63	□□□□□ -0.23
C1orf228-208	ENST00000434068	MYH7	P12883	1935 aa		13.62	□□□□□ -0.23
C1orf228-208	ENST00000434068	GPR75-ASB3	A0A0A6YYF3	556 aa		13.62	□□□□□ -0.23
C1orf228-208	ENST00000434068	WDHD1	O75717	1129 aa	Predicted RBP	13.62	□□□□□ -0.23
C1orf228-208	ENST00000434068	INPP5B	P32019	993 aa		13.62	□□□□□ -0.23
C1orf228-208	ENST00000434068	RGS19	P49795	217 aa		13.62	□□□□□ -0.23
C1orf228-208	ENST00000434068	TAF1C	Q15572	869 aa	Predicted RBP	13.62	□□□□□ -0.23
C1orf228-208	ENST00000434068	ZNF384	Q8TF68	577 aa		13.62	□□□□□ -0.23
C1orf228-208	ENST00000434068	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.62	□□□□□ -0.23
C1orf228-208	ENST00000434068	DBNDD2	Q9BQY9	259 aa		13.62	□□□□□ -0.23
C1orf228-208	ENST00000434068	RAI14	Q9P0K7	980 aa		13.62	□□□□□ -0.23
C1orf228-208	ENST00000434068	LRP2BP	Q9P2M1	347 aa		13.62	□□□□□ -0.23
C1orf228-208	ENST00000434068	NAV1	Q8NEY1	1877 aa		13.61	□□□□□ -0.23
C1orf228-208	ENST00000434068	IRF6	O14896	467 aa		13.61	□□□□□ -0.23
C1orf228-208	ENST00000434068	IGSF3	O75054	1194 aa		13.61	□□□□□ -0.23
C1orf228-208	ENST00000434068	MLLT1	Q03111	559 aa	Predicted RBP	13.61	□□□□□ -0.23
C1orf228-208	ENST00000434068	PICALM	Q13492	652 aa		13.61	□□□□□ -0.23
C1orf228-208	ENST00000434068	TBC1D9	Q6ZT07	1266 aa		13.61	□□□□□ -0.23
C1orf228-208	ENST00000434068	ERC1	Q8IUD2	1116 aa		13.61	□□□□□ -0.23
C1orf228-208	ENST00000434068	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.61	□□□□□ -0.23
C1orf228-208	ENST00000434068	FAM43A	Q8N2R8	423 aa		13.61	□□□□□ -0.23
C1orf228-208	ENST00000434068	NOL10	Q9BSC4	688 aa	Known RBP	13.61	□□□□□ -0.23
C1orf228-208	ENST00000434068	ZFYVE28	Q9HCC9	887 aa		13.61	□□□□□ -0.23
C1orf228-208	ENST00000434068	DDX4	Q9NQI0	724 aa	Known RBP	13.61	□□□□□ -0.23
C1orf228-208	ENST00000434068	DDX19B	Q9UMR2	479 aa		13.61	□□□□□ -0.23
C1orf228-208	ENST00000434068	DDX60L	Q5H9U9	1706 aa	Known RBP	13.61	□□□□□ -0.23
C1orf228-208	ENST00000434068	RHBDL3	P58872	404 aa		13.6	□□□□□ -0.23
C1orf228-208	ENST00000434068	SP3	Q02447	781 aa		13.6	□□□□□ -0.23
C1orf228-208	ENST00000434068	HSP90AB4P	Q58FF6	505 aa		13.6	□□□□□ -0.23
C1orf228-208	ENST00000434068	ZFPM1	Q8IX07	1006 aa		13.6	□□□□□ -0.23
C1orf228-208	ENST00000434068	CHMP4B	Q9H444	224 aa	Known RBP	13.6	□□□□□ -0.23
C1orf228-208	ENST00000434068	DBNL	Q9UJU6	430 aa	Known RBP	13.6	□□□□□ -0.23
C1orf228-208	ENST00000434068	TRIM17	Q9Y577	477 aa		13.6	□□□□□ -0.23
C1orf228-208	ENST00000434068	SH3BP5L	Q7L8J4	393 aa		13.59	□□□□□ -0.23
C1orf228-208	ENST00000434068	OTOP1	Q7RTM1	612 aa		13.59	□□□□□ -0.23
C1orf228-208	ENST00000434068	SCYL3	Q8IZE3	742 aa		13.59	□□□□□ -0.23
C1orf228-208	ENST00000434068	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	13.59	□□□□□ -0.23
C1orf228-208	ENST00000434068	CD99L2	Q8TCZ2	262 aa		13.59	□□□□□ -0.23
C1orf228-208	ENST00000434068	SNRK	Q9NRH2	765 aa		13.59	□□□□□ -0.23
C1orf228-208	ENST00000434068	RCAN3	Q9UKA8	241 aa		13.59	□□□□□ -0.23
C1orf228-208	ENST00000434068	KCNH4	Q9UQ05	1017 aa		13.59	□□□□□ -0.23
C1orf228-208	ENST00000434068	MYH8	P13535	1937 aa		13.58	□□□□□ -0.23
C1orf228-208	ENST00000434068	DDTL	A6NHG4	134 aa	Predicted RBP	13.58	□□□□□ -0.24
C1orf228-208	ENST00000434068	BTBD19	C9JJ37	291 aa		13.58	□□□□□ -0.24
C1orf228-208	ENST00000434068	HMMR	O75330	724 aa		13.58	□□□□□ -0.24
C1orf228-208	ENST00000434068	BAG3	O95817	575 aa		13.58	□□□□□ -0.24
C1orf228-208	ENST00000434068	PLCG2	P16885	1265 aa		13.58	□□□□□ -0.24
C1orf228-208	ENST00000434068	SOX10	P56693	466 aa		13.58	□□□□□ -0.24
C1orf228-208	ENST00000434068	MAP3K10	Q02779	954 aa		13.58	□□□□□ -0.24
C1orf228-208	ENST00000434068	ARHGEF6	Q15052	776 aa		13.58	□□□□□ -0.24
C1orf228-208	ENST00000434068	NAA16	Q6N069	864 aa	Predicted RBP	13.58	□□□□□ -0.24
C1orf228-208	ENST00000434068	ANKRD23	Q86SG2	305 aa		13.58	□□□□□ -0.24
C1orf228-208	ENST00000434068	PICK1	Q9NRD5	415 aa		13.58	□□□□□ -0.24
C1orf228-208	ENST00000434068	TLR7	Q9NYK1	1049 aa	Known RBP	13.58	□□□□□ -0.24
C1orf228-208	ENST00000434068	EXOC6B	Q9Y2D4	811 aa		13.58	□□□□□ -0.24
C1orf228-208	ENST00000434068	PHF20L1	A8MW92	1017 aa		13.57	□□□□□ -0.24
C1orf228-208	ENST00000434068	TBC1D12	O60347	775 aa		13.57	□□□□□ -0.24
C1orf228-208	ENST00000434068	TLR2	O60603	784 aa		13.57	□□□□□ -0.24
C1orf228-208	ENST00000434068	CYP2E1	P05181	493 aa	Predicted RBP	13.57	□□□□□ -0.24
C1orf228-208	ENST00000434068	ZAP70	P43403	619 aa		13.57	□□□□□ -0.24
C1orf228-208	ENST00000434068	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.57	□□□□□ -0.24
C1orf228-208	ENST00000434068	TEX11	Q8IYF3	940 aa		13.57	□□□□□ -0.24
C1orf228-208	ENST00000434068	EAF2	Q96CJ1	260 aa	Predicted RBP	13.57	□□□□□ -0.24
C1orf228-208	ENST00000434068	OSBPL5	Q9H0X9	879 aa	Predicted RBP	13.57	□□□□□ -0.24
C1orf228-208	ENST00000434068	EFCC1	Q9HA90	598 aa		13.57	□□□□□ -0.24
C1orf228-208	ENST00000434068	COG6	Q9Y2V7	657 aa		13.57	□□□□□ -0.24
C1orf228-208	ENST00000434068	CTNND1	O60716	968 aa	Known RBP	13.56	□□□□□ -0.24
C1orf228-208	ENST00000434068	TMED8	Q6PL24	325 aa	Predicted RBP	13.56	□□□□□ -0.24
C1orf228-208	ENST00000434068	AACS	Q86V21	672 aa		13.56	□□□□□ -0.24
C1orf228-208	ENST00000434068	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.56	□□□□□ -0.24
C1orf228-208	ENST00000434068	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
C1orf228-208	ENST00000434068	PTPN22	Q9Y2R2	807 aa		13.56	□□□□□ -0.24
C1orf228-208	ENST00000434068	CXCL11	O14625	94 aa		13.55	□□□□□ -0.24
C1orf228-208	ENST00000434068	PTPRA	P18433	802 aa		13.55	□□□□□ -0.24
C1orf228-208	ENST00000434068	KIF22	Q14807	665 aa		13.55	□□□□□ -0.24
C1orf228-208	ENST00000434068	CERS3	Q8IU89	383 aa		13.55	□□□□□ -0.24
C1orf228-208	ENST00000434068	RHPN1	Q8TCX5	695 aa		13.55	□□□□□ -0.24
C1orf228-208	ENST00000434068	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.55	□□□□□ -0.24
C1orf228-208	ENST00000434068	DHX36	Q9H2U1	1008 aa	Known RBP	13.55	□□□□□ -0.24
C1orf228-208	ENST00000434068	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
C1orf228-208	ENST00000434068	PIH1D3	Q9NQM4	214 aa	Known RBP	13.55	□□□□□ -0.24
C1orf228-208	ENST00000434068	FOXD4L1	Q9NU39	408 aa		13.55	□□□□□ -0.24
C1orf228-208	ENST00000434068	ZBTB40	Q9NUA8	1239 aa		13.55	□□□□□ -0.24
C1orf228-208	ENST00000434068	HERC5	Q9UII4	1024 aa	Known RBP	13.55	□□□□□ -0.24
C1orf228-208	ENST00000434068		A0A0G2JLL6	359 aa	Predicted RBP	13.54	□□□□□ -0.24
C1orf228-208	ENST00000434068	PDHX	O00330	501 aa		13.54	□□□□□ -0.24
C1orf228-208	ENST00000434068	PPP4C	P60510	307 aa		13.54	□□□□□ -0.24
C1orf228-208	ENST00000434068	MOGS	Q13724	837 aa		13.54	□□□□□ -0.24
C1orf228-208	ENST00000434068	PDE3A	Q14432	1141 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms