RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 RPAP1Q9BWH6 1393 aaPredicted RBP18.72■□□□□ 0.59
TREX1-201ENST00000433541 ZFYP08048 801 aaPredicted RBP18.72■□□□□ 0.59
TREX1-201ENST00000433541 PPP4CP60510 307 aa18.72■□□□□ 0.59
TREX1-201ENST00000433541 DCAF15Q66K64 600 aa18.72■□□□□ 0.59
TREX1-201ENST00000433541 PLEKHM2Q8IWE5 1019 aa18.72■□□□□ 0.59
TREX1-201ENST00000433541 CDAN1Q8IWY9 1227 aa18.72■□□□□ 0.59
TREX1-201ENST00000433541 AIDAQ96BJ3 306 aa18.72■□□□□ 0.59
TREX1-201ENST00000433541 CRNKL1Q9BZJ0 848 aaKnown RBP18.72■□□□□ 0.59
TREX1-201ENST00000433541 DDX4Q9NQI0 724 aaKnown RBP18.72■□□□□ 0.59
TREX1-201ENST00000433541 ECE1P42892 770 aa18.71■□□□□ 0.59
TREX1-201ENST00000433541 ZNF157P51786 506 aaPredicted RBP18.71■□□□□ 0.59
TREX1-201ENST00000433541 SLFNL1Q499Z3 407 aa18.71■□□□□ 0.59
TREX1-201ENST00000433541 CYP4F22Q6NT55 531 aa18.71■□□□□ 0.59
TREX1-201ENST00000433541 EVI5LQ96CN4 794 aa18.71■□□□□ 0.59
TREX1-201ENST00000433541 TEPSINQ96N21 525 aa18.71■□□□□ 0.59
TREX1-201ENST00000433541 TRIM34Q9BYJ4 488 aa18.71■□□□□ 0.59
TREX1-201ENST00000433541 OTOFQ9HC10 1997 aa18.71■□□□□ 0.59
TREX1-201ENST00000433541 SSC5DA1L4H1 1573 aa18.71■□□□□ 0.59
TREX1-201ENST00000433541 TCRBV5S4A2TA0A5A2 114 aa18.7■□□□□ 0.58
TREX1-201ENST00000433541 RASSF10A6NK89 507 aa18.7■□□□□ 0.58
TREX1-201ENST00000433541 RNF113AO15541 343 aaKnown RBP18.7■□□□□ 0.58
TREX1-201ENST00000433541 MBD4O95243 580 aa18.7■□□□□ 0.58
TREX1-201ENST00000433541 UBE3CQ15386 1083 aa18.7■□□□□ 0.58
TREX1-201ENST00000433541 SLC4A8Q2Y0W8 1093 aa18.7■□□□□ 0.58
TREX1-201ENST00000433541 MIGA2Q7L4E1 593 aa18.7■□□□□ 0.58
TREX1-201ENST00000433541 ZFPM1Q8IX07 1006 aa18.7■□□□□ 0.58
TREX1-201ENST00000433541 OSBPL5Q9H0X9 879 aaPredicted RBP18.7■□□□□ 0.58
TREX1-201ENST00000433541 ARMT1Q9H993 441 aa18.7■□□□□ 0.58
TREX1-201ENST00000433541 SAP30BPQ9UHR5 308 aaKnown RBP18.7■□□□□ 0.58
TREX1-201ENST00000433541 BAZ2AQ9UIF9 1905 aaKnown RBP18.7■□□□□ 0.58
TREX1-201ENST00000433541 RFX7Q2KHR2 1363 aa18.69■□□□□ 0.58
TREX1-201ENST00000433541 CEP350Q5VT06 3117 aa18.69■□□□□ 0.58
TREX1-201ENST00000433541 RGMBQ6NW40 437 aa18.69■□□□□ 0.58
TREX1-201ENST00000433541 KLRG1Q96E93 195 aa18.69■□□□□ 0.58
TREX1-201ENST00000433541 DDRGK1Q96HY6 314 aa18.69■□□□□ 0.58
TREX1-201ENST00000433541 CAPNS2Q96L46 248 aa18.69■□□□□ 0.58
TREX1-201ENST00000433541 FLT1P17948 1338 aa18.69■□□□□ 0.58
TREX1-201ENST00000433541 CHGBP05060 677 aa18.68■□□□□ 0.58
TREX1-201ENST00000433541 PDE4AP27815 886 aa18.68■□□□□ 0.58
TREX1-201ENST00000433541 LCORLQ8N3X6 602 aa18.68■□□□□ 0.58
TREX1-201ENST00000433541 APPBP2Q92624 585 aa18.68■□□□□ 0.58
TREX1-201ENST00000433541 WRNIP1Q96S55 665 aa18.68■□□□□ 0.58
TREX1-201ENST00000433541 ZNF341Q9BYN7 854 aa18.68■□□□□ 0.58
TREX1-201ENST00000433541 CSADQ9Y600 493 aa18.68■□□□□ 0.58
TREX1-201ENST00000433541 DDTLA6NHG4 134 aaPredicted RBP18.67■□□□□ 0.58
TREX1-201ENST00000433541 USP2O75604 605 aaPredicted RBP18.67■□□□□ 0.58
TREX1-201ENST00000433541 HLA-DOAP06340 250 aa18.67■□□□□ 0.58
TREX1-201ENST00000433541 VEGFBP49765 207 aa18.67■□□□□ 0.58
TREX1-201ENST00000433541 CRACR2BQ8N4Y2 399 aaPredicted RBP18.67■□□□□ 0.58
TREX1-201ENST00000433541 HHIPL1Q96JK4 782 aa18.67■□□□□ 0.58
TREX1-201ENST00000433541 RIOK1Q9BRS2 568 aaKnown RBP18.67■□□□□ 0.58
TREX1-201ENST00000433541 OSBPL3Q9H4L5 887 aa18.67■□□□□ 0.58
TREX1-201ENST00000433541 PPP4R2Q9NY27 417 aa18.67■□□□□ 0.58
TREX1-201ENST00000433541 WDR33Q9C0J8 1336 aaKnown RBP18.67■□□□□ 0.58
TREX1-201ENST00000433541 MYH8P13535 1937 aa18.66■□□□□ 0.58
TREX1-201ENST00000433541 NPM3O75607 178 aaKnown RBP18.66■□□□□ 0.58
TREX1-201ENST00000433541 ERICH6BQ5W0A0 696 aa18.66■□□□□ 0.58
TREX1-201ENST00000433541 AMOTL1Q8IY63 956 aa18.66■□□□□ 0.58
TREX1-201ENST00000433541 ANKRD13AQ8IZ07 590 aa18.66■□□□□ 0.58
TREX1-201ENST00000433541 SDR42E1Q8WUS8 393 aa18.66■□□□□ 0.58
TREX1-201ENST00000433541 CCDC102AQ96A19 550 aa18.66■□□□□ 0.58
TREX1-201ENST00000433541 SLC10A4Q96EP9 437 aa18.66■□□□□ 0.58
TREX1-201ENST00000433541 PUS7LQ9H0K6 701 aaKnown RBP18.66■□□□□ 0.58
TREX1-201ENST00000433541 DHX36Q9H2U1 1008 aaKnown RBP18.66■□□□□ 0.58
TREX1-201ENST00000433541 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.66■□□□□ 0.582e-6■■■□□ 17.1
TREX1-201ENST00000433541 PALD1Q9ULE6 856 aa18.66■□□□□ 0.58
TREX1-201ENST00000433541 SLC4A4Q9Y6R1 1079 aa18.66■□□□□ 0.58
TREX1-201ENST00000433541 POLR3DP05423 398 aaPredicted RBP18.65■□□□□ 0.58
TREX1-201ENST00000433541 MKRN3Q13064 507 aaKnown RBP18.65■□□□□ 0.58
TREX1-201ENST00000433541 SH3BP5LQ7L8J4 393 aa18.65■□□□□ 0.58
TREX1-201ENST00000433541 COL2A1P02458 1487 aaPredicted RBP18.65■□□□□ 0.58
TREX1-201ENST00000433541 FAM196BA6NMK8 535 aa18.64■□□□□ 0.57
TREX1-201ENST00000433541 APPP05067 770 aa18.64■□□□□ 0.57
TREX1-201ENST00000433541 TTC22Q5TAA0 569 aa18.64■□□□□ 0.57
TREX1-201ENST00000433541 DNAJC5GQ8N7S2 189 aa18.64■□□□□ 0.57
TREX1-201ENST00000433541 OSBP2Q969R2 916 aa18.64■□□□□ 0.57
TREX1-201ENST00000433541 CLMNQ96JQ2 1002 aa18.64■□□□□ 0.57
TREX1-201ENST00000433541 ELP3Q9H9T3 547 aa18.64■□□□□ 0.57
TREX1-201ENST00000433541 DIAPH3Q9NSV4 1193 aa18.64■□□□□ 0.57
TREX1-201ENST00000433541 MCM9Q9NXL9 1143 aa18.64■□□□□ 0.57
TREX1-201ENST00000433541 PI4KBQ9UBF8 816 aa18.64■□□□□ 0.57
TREX1-201ENST00000433541 ATAD5Q96QE3 1844 aa18.64■□□□□ 0.57
TREX1-201ENST00000433541 ATRNL1Q5VV63 1379 aa18.64■□□□□ 0.57
TREX1-201ENST00000433541 M0R2C6 588 aa18.63■□□□□ 0.57
TREX1-201ENST00000433541 GPAA1O43292 621 aa18.63■□□□□ 0.57
TREX1-201ENST00000433541 PRKAB2O43741 272 aa18.63■□□□□ 0.57
TREX1-201ENST00000433541 AOC2O75106 756 aa18.63■□□□□ 0.57
TREX1-201ENST00000433541 MAP3K9P80192 1104 aa18.63■□□□□ 0.57
TREX1-201ENST00000433541 MAP3K11Q16584 847 aa18.63■□□□□ 0.57
TREX1-201ENST00000433541 TTC6Q86TZ1 520 aa18.63■□□□□ 0.57
TREX1-201ENST00000433541 DOCK1Q14185 1865 aa18.63■□□□□ 0.57
TREX1-201ENST00000433541 SLC10A3P09131 477 aa18.62■□□□□ 0.57
TREX1-201ENST00000433541 NOGQ13253 232 aa18.62■□□□□ 0.57
TREX1-201ENST00000433541 VGLL4Q14135 290 aa18.62■□□□□ 0.57
TREX1-201ENST00000433541 LDLRAD1Q5T700 205 aa18.62■□□□□ 0.57
TREX1-201ENST00000433541 RASAL3Q86YV0 1011 aa18.62■□□□□ 0.57
TREX1-201ENST00000433541 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.62■□□□□ 0.57
TREX1-201ENST00000433541 ZKSCAN4Q969J2 545 aaPredicted RBP18.62■□□□□ 0.57
TREX1-201ENST00000433541 SEC62Q99442 399 aaKnown RBP18.62■□□□□ 0.57
TREX1-201ENST00000433541 ATP8A2Q9NTI2 1148 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms