RNA–Protein interactions for RNA: ENST00000433332.7

SRGAP3-203, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 2,222 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-203ENST00000433332 HELLSQ9NRZ9 838 aa9.97□□□□□ -0.81
SRGAP3-203ENST00000433332 PRR12Q9ULL5 1215 aa9.97□□□□□ -0.81
SRGAP3-203ENST00000433332 RBM8AQ9Y5S9 174 aaKnown RBP9.97□□□□□ -0.81
SRGAP3-203ENST00000433332 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.96□□□□□ -0.82
SRGAP3-203ENST00000433332 SPDYE2BA6NHP3 402 aa9.96□□□□□ -0.82
SRGAP3-203ENST00000433332 SPDYE5A6NIY4 337 aa9.96□□□□□ -0.82
SRGAP3-203ENST00000433332 SPDYE6P0CI01 402 aa9.96□□□□□ -0.82
SRGAP3-203ENST00000433332 ZKSCAN1P17029 563 aaPredicted RBP9.96□□□□□ -0.82
SRGAP3-203ENST00000433332 NECTIN1Q15223 517 aa9.96□□□□□ -0.82
SRGAP3-203ENST00000433332 SPDYE2Q495Y8 402 aa9.96□□□□□ -0.82
SRGAP3-203ENST00000433332 RNF20Q5VTR2 975 aa9.96□□□□□ -0.82
SRGAP3-203ENST00000433332 TPTE2Q6XPS3 522 aa9.96□□□□□ -0.82
SRGAP3-203ENST00000433332 ZNF589Q86UQ0 364 aaPredicted RBP9.96□□□□□ -0.82
SRGAP3-203ENST00000433332 MYH7P12883 1935 aa9.96□□□□□ -0.82
SRGAP3-203ENST00000433332 COL4A1P02462 1669 aa9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 TNRC6CQ9HCJ0 1690 aaKnown RBP9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 RNF113AO15541 343 aaKnown RBP9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 TAF5LO75529 589 aa9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 ZFYP08048 801 aaPredicted RBP9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 CD151P48509 253 aa9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 CCDC144BQ3MJ40 725 aa9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 ZMYM1Q5SVZ6 1142 aa9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 ICE2Q659A1 982 aa9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 PRPF40BQ6NWY9 871 aaKnown RBP9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 ANKRD18AQ8IVF6 992 aa9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 TM6SF1Q9BZW5 370 aa9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 MAP3K20Q9NYL2 800 aaKnown RBP9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 HMG20BQ9P0W2 317 aa9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 AKAP11Q9UKA4 1901 aa9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 RGPD3A6NKT7 1758 aaPredicted RBP9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 RGPD4Q7Z3J3 1758 aa9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 TMEM88BA6NKF7 163 aa9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 NEFHP12036 1026 aa9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 POU5F1Q01860 360 aaKnown RBP9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 FKBP4Q02790 459 aaKnown RBP eCLIP9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 TTF1Q15361 905 aaPredicted RBP9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 PLEKHG6Q3KR16 790 aa9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 CREB3L3Q68CJ9 461 aa9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 C3orf67Q6ZVT6 689 aa9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 RASEFQ8IZ41 740 aa9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 BRINP2Q9C0B6 783 aa9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 IRF2BPLQ9H1B7 796 aa9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 G3BP2Q9UN86 482 aaKnown RBP9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 U3KPZ7 1027 aaPredicted RBP9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 EP400Q96L91 3159 aa9.95□□□□□ -0.82
SRGAP3-203ENST00000433332 PAX7P23759 505 aa9.94□□□□□ -0.82
SRGAP3-203ENST00000433332 ERCC5P28715 1186 aaPredicted RBP9.94□□□□□ -0.82
SRGAP3-203ENST00000433332 ZAP70P43403 619 aa9.94□□□□□ -0.82
SRGAP3-203ENST00000433332 CCT2P78371 535 aaKnown RBP9.94□□□□□ -0.82
SRGAP3-203ENST00000433332 SCARF1Q14162 830 aa9.94□□□□□ -0.82
SRGAP3-203ENST00000433332 TCEAL1Q15170 157 aa9.94□□□□□ -0.82
SRGAP3-203ENST00000433332 SWT1Q5T5J6 900 aaKnown RBP9.94□□□□□ -0.82
SRGAP3-203ENST00000433332 CCDC102BQ68D86 513 aa9.94□□□□□ -0.82
SRGAP3-203ENST00000433332 JMYQ8N9B5 988 aa9.94□□□□□ -0.82
SRGAP3-203ENST00000433332 NLRP3Q96P20 1036 aa9.94□□□□□ -0.82
SRGAP3-203ENST00000433332 UPF3BQ9BZI7 483 aaKnown RBP9.94□□□□□ -0.82
SRGAP3-203ENST00000433332 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.94□□□□□ -0.82
SRGAP3-203ENST00000433332 RPAP1Q9BWH6 1393 aaPredicted RBP9.94□□□□□ -0.82
SRGAP3-203ENST00000433332 SLC27A2O14975 620 aa9.94□□□□□ -0.82
SRGAP3-203ENST00000433332 MCAMP43121 646 aa9.94□□□□□ -0.82
SRGAP3-203ENST00000433332 CHRNDQ07001 517 aa9.94□□□□□ -0.82
SRGAP3-203ENST00000433332 LRCH2Q5VUJ6 765 aa9.94□□□□□ -0.82
SRGAP3-203ENST00000433332 TANGO6Q9C0B7 1094 aa9.94□□□□□ -0.82
SRGAP3-203ENST00000433332 TNS1Q9HBL0 1735 aaKnown RBP9.94□□□□□ -0.82
SRGAP3-203ENST00000433332 DOCK2Q92608 1830 aa9.93□□□□□ -0.82
SRGAP3-203ENST00000433332 MAST3O60307 1309 aa9.93□□□□□ -0.82
SRGAP3-203ENST00000433332 POM121CA8CG34 1229 aa9.93□□□□□ -0.82
SRGAP3-203ENST00000433332 CASTP20810 708 aaKnown RBP9.93□□□□□ -0.82
SRGAP3-203ENST00000433332 PSMA5P28066 241 aa9.93□□□□□ -0.82
SRGAP3-203ENST00000433332 RXRBP28702 533 aa9.93□□□□□ -0.82
SRGAP3-203ENST00000433332 PHKA1P46020 1223 aa9.93□□□□□ -0.82
SRGAP3-203ENST00000433332 NFIXQ14938 502 aa9.93□□□□□ -0.82
SRGAP3-203ENST00000433332 TXNRD1Q16881 649 aa9.93□□□□□ -0.82
SRGAP3-203ENST00000433332 C11orf91Q3C1V1 193 aa9.93□□□□□ -0.82
SRGAP3-203ENST00000433332 ZSCAN25Q6NSZ9 544 aa9.93□□□□□ -0.82
SRGAP3-203ENST00000433332 ILDR2Q71H61 639 aa9.93□□□□□ -0.82
SRGAP3-203ENST00000433332 SNRNP27Q8WVK2 155 aaKnown RBP9.93□□□□□ -0.82
SRGAP3-203ENST00000433332 TMX3Q96JJ7 454 aa9.93□□□□□ -0.82
SRGAP3-203ENST00000433332 JAKMIP1Q96N16 626 aaKnown RBP9.93□□□□□ -0.82
SRGAP3-203ENST00000433332 INO80BQ9C086 356 aaPredicted RBP9.93□□□□□ -0.82
SRGAP3-203ENST00000433332 NUCKS1Q9H1E3 243 aaKnown RBP9.93□□□□□ -0.82
SRGAP3-203ENST00000433332 SYNPO2Q9UMS6 1093 aa9.93□□□□□ -0.82
SRGAP3-203ENST00000433332 NPHP1O15259 732 aa9.92□□□□□ -0.82
SRGAP3-203ENST00000433332 KRT32Q14532 448 aa9.92□□□□□ -0.82
SRGAP3-203ENST00000433332 TSGA10IPQ3SY00 556 aa9.92□□□□□ -0.82
SRGAP3-203ENST00000433332 CCDC129Q6ZRS4 1044 aa9.92□□□□□ -0.82
SRGAP3-203ENST00000433332 PCGF5Q86SE9 256 aa9.92□□□□□ -0.82
SRGAP3-203ENST00000433332 CNBD1Q8NA66 436 aa9.92□□□□□ -0.82
SRGAP3-203ENST00000433332 TTC14Q96N46 770 aa9.92□□□□□ -0.82
SRGAP3-203ENST00000433332 SEC62Q99442 399 aaKnown RBP9.92□□□□□ -0.82
SRGAP3-203ENST00000433332 DSCC1Q9BVC3 393 aa9.92□□□□□ -0.82
SRGAP3-203ENST00000433332 ZSWIM6Q9HCJ5 1215 aa9.92□□□□□ -0.82
SRGAP3-203ENST00000433332 CYP46A1Q9Y6A2 500 aa9.92□□□□□ -0.82
SRGAP3-203ENST00000433332 PLSCR1O15162 318 aa9.92□□□□□ -0.82
SRGAP3-203ENST00000433332 CHGBP05060 677 aa9.92□□□□□ -0.82
SRGAP3-203ENST00000433332 GYS1P13807 737 aa9.92□□□□□ -0.82
SRGAP3-203ENST00000433332 MLLT3P42568 568 aaPredicted RBP9.92□□□□□ -0.82
SRGAP3-203ENST00000433332 TNNT3P45378 269 aaPredicted RBP9.92□□□□□ -0.82
SRGAP3-203ENST00000433332 CUL4AQ13619 759 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms