RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 KLRG2A4D1S0 409 aaPredicted RBP22.89■■□□□ 1.25
VRK2-205ENST00000432057 ZBTB43O43298 467 aa22.89■■□□□ 1.25
VRK2-205ENST00000432057 SPTY2D1Q68D10 685 aaPredicted RBP22.89■■□□□ 1.25
VRK2-205ENST00000432057 CCDC144CPQ8IYA2 1237 aa22.89■■□□□ 1.25
VRK2-205ENST00000432057 CRAMP1Q96RY5 1269 aa22.89■■□□□ 1.25
VRK2-205ENST00000432057 MYL10Q9BUA6 226 aa22.89■■□□□ 1.25
VRK2-205ENST00000432057 SCAND2PQ9GZW5 306 aaPredicted RBP22.89■■□□□ 1.25
VRK2-205ENST00000432057 GGA1Q9UJY5 639 aa22.89■■□□□ 1.25
VRK2-205ENST00000432057 BBOX1O75936 387 aa22.88■■□□□ 1.25
VRK2-205ENST00000432057 ATP2B4P23634 1241 aa22.88■■□□□ 1.25
VRK2-205ENST00000432057 CDC27P30260 824 aa22.88■■□□□ 1.25
VRK2-205ENST00000432057 ADD1P35611 737 aaKnown RBP22.88■■□□□ 1.25
VRK2-205ENST00000432057 CCDC183Q5T5S1 534 aa22.88■■□□□ 1.25
VRK2-205ENST00000432057 WDR66Q8TBY9 1149 aa22.88■■□□□ 1.25
VRK2-205ENST00000432057 LEO1Q8WVC0 666 aaPredicted RBP22.88■■□□□ 1.25
VRK2-205ENST00000432057 GOLGA8AA7E2F4 631 aa22.88■■□□□ 1.25
VRK2-205ENST00000432057 CRNKL1Q9BZJ0 848 aaKnown RBP22.88■■□□□ 1.25
VRK2-205ENST00000432057 RBSNQ9H1K0 784 aa22.88■■□□□ 1.25
VRK2-205ENST00000432057 CCDC69A6NI79 296 aa22.87■■□□□ 1.25
VRK2-205ENST00000432057 OTUD7BQ6GQQ9 843 aa22.87■■□□□ 1.25
VRK2-205ENST00000432057 GIMAP6Q6P9H5 292 aa22.87■■□□□ 1.25
VRK2-205ENST00000432057 C8orf76Q96K31 380 aa22.87■■□□□ 1.25
VRK2-205ENST00000432057 LDHBP07195 334 aaKnown RBP22.86■■□□□ 1.25
VRK2-205ENST00000432057 WTAPQ15007 396 aa22.86■■□□□ 1.25
VRK2-205ENST00000432057 SART3Q15020 963 aaKnown RBP22.86■■□□□ 1.25
VRK2-205ENST00000432057 GRIK5Q16478 980 aa22.86■■□□□ 1.25
VRK2-205ENST00000432057 CTR9Q6PD62 1173 aa22.86■■□□□ 1.25
VRK2-205ENST00000432057 NLGN1Q8N2Q7 840 aa22.86■■□□□ 1.25
VRK2-205ENST00000432057 SLC12A7Q9Y666 1083 aa22.86■■□□□ 1.25
VRK2-205ENST00000432057 NASPP49321 788 aaPredicted RBP22.85■■□□□ 1.25
VRK2-205ENST00000432057 TMED8Q6PL24 325 aaPredicted RBP22.85■■□□□ 1.25
VRK2-205ENST00000432057 ILDR1Q86SU0 546 aaPredicted RBP22.85■■□□□ 1.25
VRK2-205ENST00000432057 NID2Q14112 1375 aa22.85■■□□□ 1.25
VRK2-205ENST00000432057 PPEF1O14829 653 aaPredicted RBP22.85■■□□□ 1.25
VRK2-205ENST00000432057 EVX2Q03828 476 aa22.85■■□□□ 1.25
VRK2-205ENST00000432057 CD209Q9NNX6 404 aa22.85■■□□□ 1.25
VRK2-205ENST00000432057 DCP1AQ9NPI6 582 aaPredicted RBP22.85■■□□□ 1.25
VRK2-205ENST00000432057 FAM217BQ9NTX9 383 aaPredicted RBP22.85■■□□□ 1.25
VRK2-205ENST00000432057 PODXL2Q9NZ53 605 aa22.85■■□□□ 1.25
VRK2-205ENST00000432057 POLLQ9UGP5 575 aa22.85■■□□□ 1.25
VRK2-205ENST00000432057 USP17L12C9JPN9 530 aa22.84■■□□□ 1.25
VRK2-205ENST00000432057 USP17L21D6R901 530 aa22.84■■□□□ 1.25
VRK2-205ENST00000432057 CDKL5O76039 1030 aa22.84■■□□□ 1.25
VRK2-205ENST00000432057 TBC1D16Q8TBP0 767 aa22.84■■□□□ 1.25
VRK2-205ENST00000432057 ESR2Q92731 530 aa22.84■■□□□ 1.25
VRK2-205ENST00000432057 GJB4Q9NTQ9 266 aa22.84■■□□□ 1.25
VRK2-205ENST00000432057 ERICH2A1L162 156 aa22.83■■□□□ 1.25
VRK2-205ENST00000432057 PHKBQ93100 1093 aa22.83■■□□□ 1.25
VRK2-205ENST00000432057 MTA3Q9BTC8 594 aa22.83■■□□□ 1.25
VRK2-205ENST00000432057 FTOQ9C0B1 505 aaKnown RBP eCLIP22.83■■□□□ 1.25
VRK2-205ENST00000432057 CEBPZQ03701 1054 aaKnown RBP22.83■■□□□ 1.24
VRK2-205ENST00000432057 NTRK3Q16288 839 aa22.83■■□□□ 1.24
VRK2-205ENST00000432057 CPLX2Q6PUV4 134 aaKnown RBP22.83■■□□□ 1.24
VRK2-205ENST00000432057 FLAD1Q8NFF5 587 aa22.83■■□□□ 1.24
VRK2-205ENST00000432057 FBXO18Q8NFZ0 1043 aa22.83■■□□□ 1.24
VRK2-205ENST00000432057 AIFM3Q96NN9 605 aa22.83■■□□□ 1.24
VRK2-205ENST00000432057 UBAC1Q9BSL1 405 aa22.83■■□□□ 1.24
VRK2-205ENST00000432057 ATP8A2Q9NTI2 1148 aa22.83■■□□□ 1.24
VRK2-205ENST00000432057 CFAP45Q9UL16 551 aa22.83■■□□□ 1.24
VRK2-205ENST00000432057 TNKSO95271 1327 aa22.82■■□□□ 1.24
VRK2-205ENST00000432057 RANBP6O60518 1105 aaKnown RBP22.82■■□□□ 1.24
VRK2-205ENST00000432057 PRDM1O75626 825 aa22.82■■□□□ 1.24
VRK2-205ENST00000432057 IL1R1P14778 569 aa22.82■■□□□ 1.24
VRK2-205ENST00000432057 DIXDC1Q155Q3 683 aa22.82■■□□□ 1.24
VRK2-205ENST00000432057 SYNE3Q6ZMZ3 975 aa22.82■■□□□ 1.24
VRK2-205ENST00000432057 TSPY26PQ9H489 355 aa22.82■■□□□ 1.24
VRK2-205ENST00000432057 DDX60LQ5H9U9 1706 aaKnown RBP22.82■■□□□ 1.24
VRK2-205ENST00000432057 FOCADQ5VW36 1801 aa22.82■■□□□ 1.24
VRK2-205ENST00000432057 MMP10P09238 476 aa22.81■■□□□ 1.24
VRK2-205ENST00000432057 CYP2D6P10635 497 aa22.81■■□□□ 1.24
VRK2-205ENST00000432057 LIG1P18858 919 aa22.81■■□□□ 1.24
VRK2-205ENST00000432057 MSL1Q68DK7 614 aa22.81■■□□□ 1.24
VRK2-205ENST00000432057 PGBD1Q96JS3 809 aa22.81■■□□□ 1.24
VRK2-205ENST00000432057 C6orf229H3BNL8 230 aa22.81■■□□□ 1.24
VRK2-205ENST00000432057 SEC23AQ15436 765 aa22.81■■□□□ 1.24
VRK2-205ENST00000432057 TMC4Q7Z404 712 aa22.81■■□□□ 1.24
VRK2-205ENST00000432057 SP8Q8IXZ3 490 aa22.81■■□□□ 1.24
VRK2-205ENST00000432057 USP28Q96RU2 1077 aa22.81■■□□□ 1.24
VRK2-205ENST00000432057 ALG1Q9BT22 464 aa22.81■■□□□ 1.24
VRK2-205ENST00000432057 QSER1Q2KHR3 1735 aa22.8■■□□□ 1.24
VRK2-205ENST00000432057 MYH1P12882 1939 aa22.8■■□□□ 1.24
VRK2-205ENST00000432057 GOLGA6L4A6NEF3 574 aa22.8■■□□□ 1.24
VRK2-205ENST00000432057 FGRP09769 529 aa22.8■■□□□ 1.24
VRK2-205ENST00000432057 SRGNP10124 158 aa22.8■■□□□ 1.24
VRK2-205ENST00000432057 GSTO1P78417 241 aa22.8■■□□□ 1.24
VRK2-205ENST00000432057 ZNF654Q8IZM8 581 aa22.8■■□□□ 1.24
VRK2-205ENST00000432057 ZNF396Q96N95 335 aaPredicted RBP22.8■■□□□ 1.24
VRK2-205ENST00000432057 ARPP21Q9UBL0 812 aaPredicted RBP22.8■■□□□ 1.24
VRK2-205ENST00000432057 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.8■■□□□ 1.24
VRK2-205ENST00000432057 PARP3Q9Y6F1 533 aa22.8■■□□□ 1.24
VRK2-205ENST00000432057 IGSF3O75054 1194 aa22.79■■□□□ 1.24
VRK2-205ENST00000432057 IARSP41252 1262 aaKnown RBP22.79■■□□□ 1.24
VRK2-205ENST00000432057 RTN1Q16799 776 aa22.79■■□□□ 1.24
VRK2-205ENST00000432057 SH3RF3Q8TEJ3 882 aaPredicted RBP22.79■■□□□ 1.24
VRK2-205ENST00000432057 ATP6V0A2Q9Y487 856 aa22.79■■□□□ 1.24
VRK2-205ENST00000432057 MROH7-TTC4A0A0A0MT08 1334 aa22.79■■□□□ 1.24
VRK2-205ENST00000432057 PCP11498 1178 aaKnown RBP22.79■■□□□ 1.24
VRK2-205ENST00000432057 NPR1P16066 1061 aa22.79■■□□□ 1.24
VRK2-205ENST00000432057 TMTC2Q8N394 836 aa22.79■■□□□ 1.24
VRK2-205ENST00000432057 STK36Q9NRP7 1315 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms