RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 ZMYM6O95789 1325 aa13.13□□□□□ -0.31
CLDN4-202ENST00000431918 ANTXR2P58335 489 aa13.13□□□□□ -0.31
CLDN4-202ENST00000431918 LRMPQ12912 555 aa13.13□□□□□ -0.31
CLDN4-202ENST00000431918 ZNF771Q7L3S4 317 aaPredicted RBP13.13□□□□□ -0.31
CLDN4-202ENST00000431918 TMTC2Q8N394 836 aa13.13□□□□□ -0.31
CLDN4-202ENST00000431918 V9GY48 417 aaPredicted RBP13.13□□□□□ -0.31
CLDN4-202ENST00000431918 ZNF142P52746 1687 aaPredicted RBP13.13□□□□□ -0.31
CLDN4-202ENST00000431918 SPATA31A1Q5TZJ5 1347 aa13.13□□□□□ -0.31
CLDN4-202ENST00000431918 SH2B2O14492 632 aaPredicted RBP13.13□□□□□ -0.31
CLDN4-202ENST00000431918 CAMTA2O94983 1202 aa13.13□□□□□ -0.31
CLDN4-202ENST00000431918 TRAPPC3LQ5T215 181 aa13.13□□□□□ -0.31
CLDN4-202ENST00000431918 INTS5Q6P9B9 1019 aaKnown RBP13.13□□□□□ -0.31
CLDN4-202ENST00000431918 ZNF444Q8N0Y2 327 aaPredicted RBP13.13□□□□□ -0.31
CLDN4-202ENST00000431918 AFMP43652 599 aa13.13□□□□□ -0.31
CLDN4-202ENST00000431918 C11orf57Q6ZUT1 292 aaPredicted RBP13.13□□□□□ -0.31
CLDN4-202ENST00000431918 ZNF654Q8IZM8 581 aa13.13□□□□□ -0.31
CLDN4-202ENST00000431918 FAM177A1Q8N128 213 aaPredicted RBP13.13□□□□□ -0.31
CLDN4-202ENST00000431918 IL17RAQ96F46 866 aa13.13□□□□□ -0.31
CLDN4-202ENST00000431918 NRBP1Q9UHY1 535 aa13.13□□□□□ -0.31
CLDN4-202ENST00000431918 PDE4BQ07343 736 aa13.12□□□□□ -0.31
CLDN4-202ENST00000431918 ATL3Q6DD88 541 aa13.12□□□□□ -0.31
CLDN4-202ENST00000431918 VAT1LQ9HCJ6 419 aa13.12□□□□□ -0.31
CLDN4-202ENST00000431918 VPS54Q9P1Q0 977 aa13.12□□□□□ -0.31
CLDN4-202ENST00000431918 TNKSO95271 1327 aa13.12□□□□□ -0.31
CLDN4-202ENST00000431918 CDC27P30260 824 aa13.12□□□□□ -0.31
CLDN4-202ENST00000431918 TBC1D9BQ66K14 1250 aa13.12□□□□□ -0.31
CLDN4-202ENST00000431918 ADALQ6DHV7 355 aa13.12□□□□□ -0.31
CLDN4-202ENST00000431918 GOLPH3LQ9H4A5 285 aa13.12□□□□□ -0.31
CLDN4-202ENST00000431918 SMTNL1A8MU46 457 aa13.12□□□□□ -0.31
CLDN4-202ENST00000431918 SAMD1Q6SPF0 538 aaPredicted RBP13.12□□□□□ -0.31
CLDN4-202ENST00000431918 CNBD1Q8NA66 436 aa13.12□□□□□ -0.31
CLDN4-202ENST00000431918 CGNQ9P2M7 1197 aaKnown RBP13.12□□□□□ -0.31
CLDN4-202ENST00000431918 SAP30BPQ9UHR5 308 aaKnown RBP13.12□□□□□ -0.31
CLDN4-202ENST00000431918 FDPSP14324 419 aaKnown RBP13.11□□□□□ -0.31
CLDN4-202ENST00000431918 ZNF75DP51815 510 aa13.11□□□□□ -0.31
CLDN4-202ENST00000431918 KIF23Q02241 960 aaPredicted RBP13.11□□□□□ -0.31
CLDN4-202ENST00000431918 GPR101Q96P66 508 aaPredicted RBP13.11□□□□□ -0.31
CLDN4-202ENST00000431918 WTIPA6NIX2 430 aaPredicted RBP13.11□□□□□ -0.31
CLDN4-202ENST00000431918 PFKFB1P16118 471 aa13.11□□□□□ -0.31
CLDN4-202ENST00000431918 LINC00301Q8NCQ3 95 aa13.11□□□□□ -0.31
CLDN4-202ENST00000431918 KAT14Q9H8E8 782 aa13.11□□□□□ -0.31
CLDN4-202ENST00000431918 CAVIN2O95810 425 aa13.11□□□□□ -0.31
CLDN4-202ENST00000431918 IFNKQ9P0W0 207 aa13.11□□□□□ -0.31
CLDN4-202ENST00000431918 BCL9O00512 1426 aa13.11□□□□□ -0.31
CLDN4-202ENST00000431918 YEATS4O95619 227 aa13.11□□□□□ -0.31
CLDN4-202ENST00000431918 CEP131Q9UPN4 1083 aa13.11□□□□□ -0.31
CLDN4-202ENST00000431918 GSG1L2A8MUP6 293 aa13.1□□□□□ -0.31
CLDN4-202ENST00000431918 UBE2Q2LH0YL09 131 aa13.1□□□□□ -0.31
CLDN4-202ENST00000431918 LDHBP07195 334 aaKnown RBP13.1□□□□□ -0.31
CLDN4-202ENST00000431918 TNNT1P13805 278 aa13.1□□□□□ -0.31
CLDN4-202ENST00000431918 SFPQP23246 707 aaKnown RBP eCLIP13.1□□□□□ -0.31
CLDN4-202ENST00000431918 TSC1Q92574 1164 aa13.1□□□□□ -0.31
CLDN4-202ENST00000431918 DHX58Q96C10 678 aa13.1□□□□□ -0.31
CLDN4-202ENST00000431918 RTEL1Q9NZ71 1219 aa13.1□□□□□ -0.31
CLDN4-202ENST00000431918 THRAP3Q9Y2W1 955 aaKnown RBP13.1□□□□□ -0.31
CLDN4-202ENST00000431918 MARF1Q9Y4F3 1742 aaKnown RBP13.1□□□□□ -0.31
CLDN4-202ENST00000431918 ARID4AP29374 1257 aaPredicted RBP13.1□□□□□ -0.31
CLDN4-202ENST00000431918 FANCBQ8NB91 859 aa13.1□□□□□ -0.31
CLDN4-202ENST00000431918 PYCARDQ9ULZ3 195 aa13.1□□□□□ -0.31
CLDN4-202ENST00000431918 RIMBP2O15034 1052 aa13.1□□□□□ -0.31
CLDN4-202ENST00000431918 SKILP12757 684 aa13.1□□□□□ -0.31
CLDN4-202ENST00000431918 UBE4AQ14139 1066 aa13.1□□□□□ -0.31
CLDN4-202ENST00000431918 ANKRD2Q9GZV1 360 aa13.1□□□□□ -0.31
CLDN4-202ENST00000431918 MINPP1Q9UNW1 487 aa13.1□□□□□ -0.31
CLDN4-202ENST00000431918 KIF28PB7ZC32 967 aa13.09□□□□□ -0.31
CLDN4-202ENST00000431918 NR5A1Q13285 461 aa13.09□□□□□ -0.31
CLDN4-202ENST00000431918 ZNF174Q15697 407 aa13.09□□□□□ -0.31
CLDN4-202ENST00000431918 FAM196AQ6ZSG2 479 aa13.09□□□□□ -0.31
CLDN4-202ENST00000431918 KRI1Q8N9T8 703 aaKnown RBP13.09□□□□□ -0.31
CLDN4-202ENST00000431918 LINC00116Q8NCU8 138 aa13.09□□□□□ -0.31
CLDN4-202ENST00000431918 EPB41L4AQ9HCS5 686 aaPredicted RBP13.09□□□□□ -0.31
CLDN4-202ENST00000431918 ZNF500O60304 480 aaPredicted RBP13.09□□□□□ -0.31
CLDN4-202ENST00000431918 DEXIO95424 95 aa13.09□□□□□ -0.31
CLDN4-202ENST00000431918 BAG3O95817 575 aa13.09□□□□□ -0.31
CLDN4-202ENST00000431918 CCAR2Q8N163 923 aaKnown RBP13.09□□□□□ -0.31
CLDN4-202ENST00000431918 KCNH3Q9ULD8 1083 aa13.09□□□□□ -0.31
CLDN4-202ENST00000431918 TRIM75PA6NK02 468 aa13.09□□□□□ -0.31
CLDN4-202ENST00000431918 NTSR2O95665 410 aa13.09□□□□□ -0.31
CLDN4-202ENST00000431918 TSPY3P0CV98 308 aa13.09□□□□□ -0.31
CLDN4-202ENST00000431918 TSPY8P0CW00 308 aa13.09□□□□□ -0.31
CLDN4-202ENST00000431918 PNOCQ13519 176 aa13.09□□□□□ -0.31
CLDN4-202ENST00000431918 DHX8Q14562 1220 aaKnown RBP13.09□□□□□ -0.31
CLDN4-202ENST00000431918 SPTY2D1Q68D10 685 aaPredicted RBP13.09□□□□□ -0.31
CLDN4-202ENST00000431918 KIAA1468Q9P260 1216 aa13.09□□□□□ -0.31
CLDN4-202ENST00000431918 AFDNP55196 1824 aaKnown RBP13.09□□□□□ -0.31
CLDN4-202ENST00000431918 POLR2DO15514 142 aaKnown RBP13.08□□□□□ -0.31
CLDN4-202ENST00000431918 PRDX5P30044 214 aa13.08□□□□□ -0.31
CLDN4-202ENST00000431918 RBM5P52756 815 aaKnown RBP eCLIP13.08□□□□□ -0.31
CLDN4-202ENST00000431918 UFL1O94874 794 aa13.08□□□□□ -0.32
CLDN4-202ENST00000431918 PICALMQ13492 652 aa13.08□□□□□ -0.32
CLDN4-202ENST00000431918 DPCR1Q3MIW9 517 aa13.08□□□□□ -0.32
CLDN4-202ENST00000431918 SMARCE1Q969G3 411 aa13.08□□□□□ -0.32
CLDN4-202ENST00000431918 HPS5Q9UPZ3 1129 aa13.08□□□□□ -0.32
CLDN4-202ENST00000431918 CCDC112Q8NEF3 446 aa13.08□□□□□ -0.32
CLDN4-202ENST00000431918 LY9Q9HBG7 655 aa13.08□□□□□ -0.32
CLDN4-202ENST00000431918 NOSTRINQ8IVI9 506 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 STAMQ92783 540 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 TRIM34Q9BYJ4 488 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 RTL9Q8NET4 1388 aa13.07□□□□□ -0.32
CLDN4-202ENST00000431918 ZNF804BA4D1E1 1349 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms