RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 GBA2Q9HCG7 927 aaPredicted RBP22.18■■□□□ 1.14
RFTN1-202ENST00000431547 CREBZFQ9NS37 354 aa22.18■■□□□ 1.14
RFTN1-202ENST00000431547 FLT1P17948 1338 aa22.17■■□□□ 1.14
RFTN1-202ENST00000431547 USP5P45974 858 aa22.17■■□□□ 1.14
RFTN1-202ENST00000431547 FKBP1BP68106 108 aa22.17■■□□□ 1.14
RFTN1-202ENST00000431547 SH3BP5LQ7L8J4 393 aa22.17■■□□□ 1.14
RFTN1-202ENST00000431547 MAPKAPK5Q8IW41 473 aa22.17■■□□□ 1.14
RFTN1-202ENST00000431547 C2orf69Q8N8R5 385 aa22.17■■□□□ 1.14
RFTN1-202ENST00000431547 STRBPQ96SI9 672 aaKnown RBP22.17■■□□□ 1.14
RFTN1-202ENST00000431547 HELLSQ9NRZ9 838 aa22.17■■□□□ 1.14
RFTN1-202ENST00000431547 ATRNL1Q5VV63 1379 aa22.16■■□□□ 1.14
RFTN1-202ENST00000431547 M0R2C6 588 aa22.16■■□□□ 1.14
RFTN1-202ENST00000431547 HIP1O00291 1037 aa22.16■■□□□ 1.14
RFTN1-202ENST00000431547 SEC62Q99442 399 aaKnown RBP22.16■■□□□ 1.14
RFTN1-202ENST00000431547 DHX36Q9H2U1 1008 aaKnown RBP22.16■■□□□ 1.14
RFTN1-202ENST00000431547 MKRN1Q9UHC7 482 aaKnown RBP22.16■■□□□ 1.14
RFTN1-202ENST00000431547 COL2A1P02458 1487 aaPredicted RBP22.15■■□□□ 1.14
RFTN1-202ENST00000431547 DDTLA6NHG4 134 aaPredicted RBP22.15■■□□□ 1.14
RFTN1-202ENST00000431547 GPAA1O43292 621 aa22.15■■□□□ 1.14
RFTN1-202ENST00000431547 PPP1R12BO60237 982 aaPredicted RBP22.15■■□□□ 1.14
RFTN1-202ENST00000431547 ZSCAN29Q8IWY8 852 aaPredicted RBP22.15■■□□□ 1.14
RFTN1-202ENST00000431547 ATP8A2Q9NTI2 1148 aa22.15■■□□□ 1.14
RFTN1-202ENST00000431547 POLR2AP24928 1970 aaKnown RBP22.14■■□□□ 1.14
RFTN1-202ENST00000431547 SSC5DA1L4H1 1573 aa22.14■■□□□ 1.13
RFTN1-202ENST00000431547 PRKAB2O43741 272 aa22.14■■□□□ 1.13
RFTN1-202ENST00000431547 BMP2KLQ5H9B9 411 aa22.14■■□□□ 1.13
RFTN1-202ENST00000431547 FAM227BQ96M60 508 aa22.14■■□□□ 1.13
RFTN1-202ENST00000431547 CSRNP1Q96S65 589 aa22.14■■□□□ 1.13
RFTN1-202ENST00000431547 TLL2Q9Y6L7 1015 aa22.14■■□□□ 1.13
RFTN1-202ENST00000431547 SLC4A4Q9Y6R1 1079 aa22.14■■□□□ 1.13
RFTN1-202ENST00000431547 GNAT2P19087 354 aa22.13■■□□□ 1.13
RFTN1-202ENST00000431547 MAP3K10Q02779 954 aa22.13■■□□□ 1.13
RFTN1-202ENST00000431547 NMIQ13287 307 aaPredicted RBP22.13■■□□□ 1.13
RFTN1-202ENST00000431547 MAP3K11Q16584 847 aa22.13■■□□□ 1.13
RFTN1-202ENST00000431547 MCMDC2Q4G0Z9 681 aa22.13■■□□□ 1.13
RFTN1-202ENST00000431547 DCAF15Q66K64 600 aa22.13■■□□□ 1.13
RFTN1-202ENST00000431547 ARMC9Q7Z3E5 817 aa22.13■■□□□ 1.13
RFTN1-202ENST00000431547 SAPCD2Q86UD0 394 aa22.13■■□□□ 1.13
RFTN1-202ENST00000431547 SDR42E1Q8WUS8 393 aa22.13■■□□□ 1.13
RFTN1-202ENST00000431547 DCP1AQ9NPI6 582 aaPredicted RBP22.13■■□□□ 1.13
RFTN1-202ENST00000431547 DIAPH3Q9NSV4 1193 aa22.13■■□□□ 1.13
RFTN1-202ENST00000431547 A0A0D9SFI3 127 aa22.12■■□□□ 1.13
RFTN1-202ENST00000431547 USP2O75604 605 aaPredicted RBP22.12■■□□□ 1.13
RFTN1-202ENST00000431547 TTLL12Q14166 644 aaPredicted RBP22.12■■□□□ 1.13
RFTN1-202ENST00000431547 PI4KBQ9UBF8 816 aa22.12■■□□□ 1.13
RFTN1-202ENST00000431547 PALD1Q9ULE6 856 aa22.12■■□□□ 1.13
RFTN1-202ENST00000431547 PRKG1Q13976 671 aa22.11■■□□□ 1.13
RFTN1-202ENST00000431547 GIMAP6Q6P9H5 292 aa22.11■■□□□ 1.13
RFTN1-202ENST00000431547 SAP30BPQ9UHR5 308 aaKnown RBP22.11■■□□□ 1.13
RFTN1-202ENST00000431547 ABT1Q9ULW3 272 aaKnown RBP22.11■■□□□ 1.13
RFTN1-202ENST00000431547 ANGEL1Q9UNK9 670 aaKnown RBP22.11■■□□□ 1.13
RFTN1-202ENST00000431547 UNCXA6NJT0 531 aa22.1■■□□□ 1.13
RFTN1-202ENST00000431547 GSG1L2A8MUP6 293 aa22.1■■□□□ 1.13
RFTN1-202ENST00000431547 PATL2C9JE40 543 aaKnown RBP22.1■■□□□ 1.13
RFTN1-202ENST00000431547 UBE2Q2LH0YL09 131 aa22.1■■□□□ 1.13
RFTN1-202ENST00000431547 TBC1D12O60347 775 aa22.1■■□□□ 1.13
RFTN1-202ENST00000431547 IREB2P48200 963 aaKnown RBP22.1■■□□□ 1.13
RFTN1-202ENST00000431547 HUNKP57058 714 aa22.1■■□□□ 1.13
RFTN1-202ENST00000431547 LDLRAD1Q5T700 205 aa22.1■■□□□ 1.13
RFTN1-202ENST00000431547 MOB2Q70IA6 237 aa22.1■■□□□ 1.13
RFTN1-202ENST00000431547 MIGA2Q7L4E1 593 aa22.1■■□□□ 1.13
RFTN1-202ENST00000431547 FOXP4Q8IVH2 680 aaPredicted RBP22.1■■□□□ 1.13
RFTN1-202ENST00000431547 DDRGK1Q96HY6 314 aa22.1■■□□□ 1.13
RFTN1-202ENST00000431547 HHIPL1Q96JK4 782 aa22.1■■□□□ 1.13
RFTN1-202ENST00000431547 FZD1Q9UP38 647 aa22.1■■□□□ 1.13
RFTN1-202ENST00000431547 HLA-DOAP06340 250 aa22.09■■□□□ 1.13
RFTN1-202ENST00000431547 CHMLP26374 656 aa22.09■■□□□ 1.13
RFTN1-202ENST00000431547 CWC27Q6UX04 472 aaKnown RBP22.09■■□□□ 1.13
RFTN1-202ENST00000431547 CCDC129Q6ZRS4 1044 aa22.09■■□□□ 1.13
RFTN1-202ENST00000431547 TTC6Q86TZ1 520 aa22.09■■□□□ 1.13
RFTN1-202ENST00000431547 METTL16Q86W50 562 aaKnown RBP22.09■■□□□ 1.13
RFTN1-202ENST00000431547 KLRG1Q96E93 195 aa22.09■■□□□ 1.13
RFTN1-202ENST00000431547 ZNF341Q9BYN7 854 aa22.09■■□□□ 1.13
RFTN1-202ENST00000431547 MCM9Q9NXL9 1143 aa22.09■■□□□ 1.13
RFTN1-202ENST00000431547 MYH7P12883 1935 aa22.08■■□□□ 1.13
RFTN1-202ENST00000431547 RASSF10A6NK89 507 aa22.08■■□□□ 1.13
RFTN1-202ENST00000431547 MFAP1P55081 439 aaKnown RBP22.08■■□□□ 1.13
RFTN1-202ENST00000431547 HTRA3P83110 453 aa22.08■■□□□ 1.13
RFTN1-202ENST00000431547 HERC5Q9UII4 1024 aaKnown RBP22.08■■□□□ 1.13
RFTN1-202ENST00000431547 ZNF112Q9UJU3 913 aa22.08■■□□□ 1.13
RFTN1-202ENST00000431547 PAPPA2Q9BXP8 1791 aa22.07■■□□□ 1.12
RFTN1-202ENST00000431547 POLR3DP05423 398 aaPredicted RBP22.07■■□□□ 1.12
RFTN1-202ENST00000431547 DEFB115Q30KQ5 88 aa22.07■■□□□ 1.12
RFTN1-202ENST00000431547 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.07■■□□□ 1.12
RFTN1-202ENST00000431547 NACAP1Q9BZK3 213 aa22.07■■□□□ 1.12
RFTN1-202ENST00000431547 EHD4Q9H223 541 aa22.07■■□□□ 1.12
RFTN1-202ENST00000431547 TRPM7Q96QT4 1865 aa22.07■■□□□ 1.12
RFTN1-202ENST00000431547 CCDC171Q6TFL3 1326 aa22.06■■□□□ 1.12
RFTN1-202ENST00000431547 USP17L12C9JPN9 530 aa22.06■■□□□ 1.12
RFTN1-202ENST00000431547 USP17L21D6R901 530 aa22.06■■□□□ 1.12
RFTN1-202ENST00000431547 APPP05067 770 aa22.06■■□□□ 1.12
RFTN1-202ENST00000431547 PLCD1P51178 756 aa22.06■■□□□ 1.12
RFTN1-202ENST00000431547 MAP3K9P80192 1104 aa22.06■■□□□ 1.12
RFTN1-202ENST00000431547 ZNF589Q86UQ0 364 aaPredicted RBP22.06■■□□□ 1.12
RFTN1-202ENST00000431547 ANKRD13AQ8IZ07 590 aa22.06■■□□□ 1.12
RFTN1-202ENST00000431547 IFNL3Q8IZI9 196 aa22.06■■□□□ 1.12
RFTN1-202ENST00000431547 RUFY2Q8WXA3 655 aa22.06■■□□□ 1.12
RFTN1-202ENST00000431547 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.06■■□□□ 1.12
RFTN1-202ENST00000431547 PHF20L1A8MW92 1017 aa22.05■■□□□ 1.12
RFTN1-202ENST00000431547 SBK1Q52WX2 424 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms