RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 PROCA1Q8NCQ7 364 aaPredicted RBP13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 SLC27A2O14975 620 aa13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 ACTN4O43707 911 aaKnown RBP13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 RBM28Q9NW13 759 aaKnown RBP13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 SH3BP5O60239 455 aa13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 PNMA8AQ86V59 439 aaPredicted RBP13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 OTUD7AQ8TE49 926 aaPredicted RBP13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 IDI1Q13907 227 aa13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 CCDC62Q6P9F0 684 aa13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 SETDB2Q96T68 719 aa13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 UNC13AQ9UPW8 1703 aa13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 PDE4DQ08499 809 aa13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 ATL3Q6DD88 541 aa13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 KRT28Q7Z3Y7 464 aa13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 IMPACTQ9P2X3 320 aa13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 TRIM14Q14142 442 aa13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 FAM173BQ6P4H8 233 aa13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 CNNM4Q6P4Q7 775 aa13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 CDC37L1Q7L3B6 337 aa13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 TAOK1Q7L7X3 1001 aa13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 CCDC110Q8TBZ0 833 aa13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 KIFAP3Q92845 792 aa13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 VCX3BQ9H321 246 aa13.1□□□□□ -0.31
RIMKLA-202ENST00000431473 PSMD6Q15008 389 aa13.09□□□□□ -0.31
RIMKLA-202ENST00000431473 ASIC2Q16515 512 aa13.09□□□□□ -0.31
RIMKLA-202ENST00000431473 ANO1Q5XXA6 986 aa13.09□□□□□ -0.31
RIMKLA-202ENST00000431473 KIFC2Q96AC6 838 aa13.09□□□□□ -0.31
RIMKLA-202ENST00000431473 SECISBP2LQ93073 1101 aaKnown RBP13.09□□□□□ -0.31
RIMKLA-202ENST00000431473 ACSBG1Q96GR2 724 aa13.09□□□□□ -0.31
RIMKLA-202ENST00000431473 CLSTN2Q9H4D0 955 aa13.09□□□□□ -0.31
RIMKLA-202ENST00000431473 TTC36A6NLP5 189 aa13.09□□□□□ -0.31
RIMKLA-202ENST00000431473 ZNF804AQ7Z570 1209 aa13.09□□□□□ -0.31
RIMKLA-202ENST00000431473 KLHL7Q8IXQ5 586 aa13.09□□□□□ -0.31
RIMKLA-202ENST00000431473 B4E1Z4 1266 aa13.09□□□□□ -0.31
RIMKLA-202ENST00000431473 CHMP2AO43633 222 aa13.09□□□□□ -0.31
RIMKLA-202ENST00000431473 TBC1D7Q9P0N9 293 aa13.09□□□□□ -0.31
RIMKLA-202ENST00000431473 RAD50Q92878 1312 aa13.09□□□□□ -0.31
RIMKLA-202ENST00000431473 PDE1CQ14123 709 aaPredicted RBP13.09□□□□□ -0.31
RIMKLA-202ENST00000431473 PIK3AP1Q6ZUJ8 805 aa13.09□□□□□ -0.31
RIMKLA-202ENST00000431473 UIMC1Q96RL1 719 aa13.09□□□□□ -0.31
RIMKLA-202ENST00000431473 SDCCAG8Q86SQ7 713 aaPredicted RBP13.09□□□□□ -0.31
RIMKLA-202ENST00000431473 FMNL3Q8IVF7 1028 aa13.08□□□□□ -0.31
RIMKLA-202ENST00000431473 NFATC2IPQ8NCF5 419 aa13.08□□□□□ -0.31
RIMKLA-202ENST00000431473 SAP30BPQ9UHR5 308 aaKnown RBP13.08□□□□□ -0.31
RIMKLA-202ENST00000431473 GAS8O95995 478 aa13.08□□□□□ -0.32
RIMKLA-202ENST00000431473 RPL13P26373 211 aaKnown RBP13.08□□□□□ -0.32
RIMKLA-202ENST00000431473 PAK1Q13153 545 aa13.08□□□□□ -0.32
RIMKLA-202ENST00000431473 CLUL1Q15846 466 aa13.08□□□□□ -0.32
RIMKLA-202ENST00000431473 CSGALNACT2Q8N6G5 542 aa13.08□□□□□ -0.32
RIMKLA-202ENST00000431473 KIAA1524Q8TCG1 905 aa13.08□□□□□ -0.32
RIMKLA-202ENST00000431473 PFDN4Q9NQP4 134 aa13.08□□□□□ -0.32
RIMKLA-202ENST00000431473 ECM2O94769 699 aaPredicted RBP13.08□□□□□ -0.32
RIMKLA-202ENST00000431473 GABPB1Q06547 395 aaPredicted RBP13.08□□□□□ -0.32
RIMKLA-202ENST00000431473 PARP1P09874 1014 aaKnown RBP13.08□□□□□ -0.32
RIMKLA-202ENST00000431473 ADKP55263 362 aaKnown RBP13.08□□□□□ -0.32
RIMKLA-202ENST00000431473 DENND2CQ68D51 928 aa13.08□□□□□ -0.32
RIMKLA-202ENST00000431473 TRIM68Q6AZZ1 485 aa13.08□□□□□ -0.32
RIMKLA-202ENST00000431473 ARHGAP25P42331 645 aa13.08□□□□□ -0.32
RIMKLA-202ENST00000431473 TSNAXIP1Q2TAA8 658 aa13.08□□□□□ -0.32
RIMKLA-202ENST00000431473 GBP7Q8N8V2 638 aaPredicted RBP13.08□□□□□ -0.32
RIMKLA-202ENST00000431473 MSANTD4Q8NCY6 345 aa13.08□□□□□ -0.32
RIMKLA-202ENST00000431473 CD109Q6YHK3 1445 aa13.08□□□□□ -0.32
RIMKLA-202ENST00000431473 BCL2L12Q9HB09 334 aa13.08□□□□□ -0.32
RIMKLA-202ENST00000431473 ITIH3Q06033 890 aa13.08□□□□□ -0.32
RIMKLA-202ENST00000431473 HARSP12081 509 aaKnown RBP13.07□□□□□ -0.32
RIMKLA-202ENST00000431473 PHKBQ93100 1093 aa13.07□□□□□ -0.32
RIMKLA-202ENST00000431473 FAM184BQ9ULE4 1060 aa13.07□□□□□ -0.32
RIMKLA-202ENST00000431473 NIP7Q9Y221 180 aaKnown RBP eCLIP13.07□□□□□ -0.32
RIMKLA-202ENST00000431473 ZNF445P59923 1031 aa13.07□□□□□ -0.32
RIMKLA-202ENST00000431473 POSTNQ15063 836 aa13.07□□□□□ -0.32
RIMKLA-202ENST00000431473 BIVM-ERCC5R4GMW8 1640 aa13.07□□□□□ -0.32
RIMKLA-202ENST00000431473 EIF4A2Q14240 407 aaKnown RBP13.07□□□□□ -0.32
RIMKLA-202ENST00000431473 TXNDC9O14530 226 aa13.07□□□□□ -0.32
RIMKLA-202ENST00000431473 VAMP4O75379 141 aa13.07□□□□□ -0.32
RIMKLA-202ENST00000431473 C14orf93Q9H972 538 aaKnown RBP13.07□□□□□ -0.32
RIMKLA-202ENST00000431473 PNOCQ13519 176 aa13.07□□□□□ -0.32
RIMKLA-202ENST00000431473 KDM5BQ9UGL1 1544 aa13.07□□□□□ -0.32
RIMKLA-202ENST00000431473 ALDH1L1O75891 902 aa13.07□□□□□ -0.32
RIMKLA-202ENST00000431473 TBC1D8O95759 1140 aa13.07□□□□□ -0.32
RIMKLA-202ENST00000431473 GUCY2FP51841 1108 aa13.07□□□□□ -0.32
RIMKLA-202ENST00000431473 NLRP12P59046 1061 aa13.07□□□□□ -0.32
RIMKLA-202ENST00000431473 WDR44Q5JSH3 913 aa13.07□□□□□ -0.32
RIMKLA-202ENST00000431473 PRAG1Q86YV5 1406 aa13.06□□□□□ -0.32
RIMKLA-202ENST00000431473 TNFAIP3P21580 790 aa13.06□□□□□ -0.32
RIMKLA-202ENST00000431473 BIRC3Q13489 604 aa13.06□□□□□ -0.32
RIMKLA-202ENST00000431473 PPP2R5DQ14738 602 aa13.06□□□□□ -0.32
RIMKLA-202ENST00000431473 ZSCAN26Q16670 478 aa13.06□□□□□ -0.32
RIMKLA-202ENST00000431473 CCT6BQ92526 530 aa13.06□□□□□ -0.32
RIMKLA-202ENST00000431473 FAM227BQ96M60 508 aa13.06□□□□□ -0.32
RIMKLA-202ENST00000431473 RNF10Q8N5U6 811 aaKnown RBP13.06□□□□□ -0.32
RIMKLA-202ENST00000431473 CABS1Q96KC9 395 aa13.06□□□□□ -0.32
RIMKLA-202ENST00000431473 TACO1Q9BSH4 297 aaKnown RBP13.06□□□□□ -0.32
RIMKLA-202ENST00000431473 CSRNP2Q9H175 543 aa13.06□□□□□ -0.32
RIMKLA-202ENST00000431473 DDX21Q9NR30 783 aaKnown RBP eCLIP13.06□□□□□ -0.32
RIMKLA-202ENST00000431473 ASIC3Q9UHC3 531 aa13.06□□□□□ -0.32
RIMKLA-202ENST00000431473 ADGBQ8N7X0 1667 aa13.06□□□□□ -0.32
RIMKLA-202ENST00000431473 RAD51AP2Q09MP3 1159 aa13.06□□□□□ -0.32
RIMKLA-202ENST00000431473 TUBB2AQ13885 445 aa13.06□□□□□ -0.32
RIMKLA-202ENST00000431473 TUBB2BQ9BVA1 445 aa13.06□□□□□ -0.32
RIMKLA-202ENST00000431473 SNX14Q9Y5W7 946 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms