RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 FMR1Q06787 632 aaKnown RBP eCLIP8.76□□□□□ -1.01
PTPN4-204ENST00000431283 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.76□□□□□ -1.01
PTPN4-204ENST00000431283 STK11IPQ8N1F8 1099 aa8.76□□□□□ -1.01
PTPN4-204ENST00000431283 NECAB3Q96P71 396 aaPredicted RBP8.76□□□□□ -1.01
PTPN4-204ENST00000431283 SLC5A6Q9Y289 635 aa8.76□□□□□ -1.01
PTPN4-204ENST00000431283 RNF114Q9Y508 228 aa8.76□□□□□ -1.01
PTPN4-204ENST00000431283 LRRC14Q15048 493 aa8.75□□□□□ -1.01
PTPN4-204ENST00000431283 C3orf58Q8NDZ4 430 aa8.75□□□□□ -1.01
PTPN4-204ENST00000431283 STK35Q8TDR2 534 aa8.75□□□□□ -1.01
PTPN4-204ENST00000431283 GPBAR1Q8TDU6 330 aa8.75□□□□□ -1.01
PTPN4-204ENST00000431283 ADGRE2Q9UHX3 823 aa8.75□□□□□ -1.01
PTPN4-204ENST00000431283 PCDHGC5Q9Y5F6 944 aa8.75□□□□□ -1.01
PTPN4-204ENST00000431283 ERVK-24P63145 666 aa8.74□□□□□ -1.01
PTPN4-204ENST00000431283 ZC3H12AQ5D1E8 599 aaKnown RBP8.74□□□□□ -1.01
PTPN4-204ENST00000431283 RNF214Q8ND24 703 aa8.74□□□□□ -1.01
PTPN4-204ENST00000431283 KRTAP9-2Q9BYQ4 174 aa8.74□□□□□ -1.01
PTPN4-204ENST00000431283 LLGL2Q6P1M3 1020 aa8.73□□□□□ -1.01
PTPN4-204ENST00000431283 NETO1Q8TDF5 533 aa8.73□□□□□ -1.01
PTPN4-204ENST00000431283 MISP3Q96FF7 219 aa8.73□□□□□ -1.01
PTPN4-204ENST00000431283 FAM8A1Q9UBU6 413 aa8.73□□□□□ -1.01
PTPN4-204ENST00000431283 FBXO24O75426 580 aa8.72□□□□□ -1.01
PTPN4-204ENST00000431283 ZNF252P-AS1Q0IIN9 211 aa8.72□□□□□ -1.01
PTPN4-204ENST00000431283 CDC37L1Q7L3B6 337 aa8.72□□□□□ -1.01
PTPN4-204ENST00000431283 ISL2Q96A47 359 aa8.72□□□□□ -1.01
PTPN4-204ENST00000431283 OSBPL7Q9BZF2 842 aa8.72□□□□□ -1.01
PTPN4-204ENST00000431283 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.71□□□□□ -1.02
PTPN4-204ENST00000431283 ENC1O14682 589 aa8.71□□□□□ -1.02
PTPN4-204ENST00000431283 TRIM37O94972 964 aa8.71□□□□□ -1.02
PTPN4-204ENST00000431283 PLCL1Q15111 1095 aa8.71□□□□□ -1.02
PTPN4-204ENST00000431283 FAM181AQ8N9Y4 354 aa8.71□□□□□ -1.02
PTPN4-204ENST00000431283 FRMD6Q96NE9 622 aa8.71□□□□□ -1.02
PTPN4-204ENST00000431283 SETDB2Q96T68 719 aa8.71□□□□□ -1.02
PTPN4-204ENST00000431283 C12orf49Q9H741 205 aa8.71□□□□□ -1.02
PTPN4-204ENST00000431283 PAK6Q9NQU5 681 aaPredicted RBP8.71□□□□□ -1.02
PTPN4-204ENST00000431283 WWC3Q9ULE0 1092 aa8.71□□□□□ -1.02
PTPN4-204ENST00000431283 CSADQ9Y600 493 aa8.71□□□□□ -1.02
PTPN4-204ENST00000431283 LDHBP07195 334 aaKnown RBP8.7□□□□□ -1.02
PTPN4-204ENST00000431283 NEFMP07197 916 aa8.7□□□□□ -1.02
PTPN4-204ENST00000431283 USP17L7P0C7H9 530 aa8.7□□□□□ -1.02
PTPN4-204ENST00000431283 FGD1P98174 961 aa8.7□□□□□ -1.02
PTPN4-204ENST00000431283 TOP6BLQ8N6T0 577 aa8.7□□□□□ -1.02
PTPN4-204ENST00000431283 BCL7CQ8WUZ0 217 aaPredicted RBP8.7□□□□□ -1.02
PTPN4-204ENST00000431283 ELMO3Q96BJ8 720 aa8.7□□□□□ -1.02
PTPN4-204ENST00000431283 DUSP23Q9BVJ7 150 aa8.7□□□□□ -1.02
PTPN4-204ENST00000431283 TRAIPQ9BWF2 469 aa8.7□□□□□ -1.02
PTPN4-204ENST00000431283 GOLGA2P5Q9HBQ8 144 aa8.7□□□□□ -1.02
PTPN4-204ENST00000431283 PCDHA4Q9UN74 947 aa8.7□□□□□ -1.02
PTPN4-204ENST00000431283 CYP8B1Q9UNU6 501 aa8.7□□□□□ -1.02
PTPN4-204ENST00000431283 KRTAP9-6A0A140TA67 174 aa8.69□□□□□ -1.02
PTPN4-204ENST00000431283 DCDC2CA8MYV0 355 aa8.69□□□□□ -1.02
PTPN4-204ENST00000431283 LMNB1P20700 586 aa8.69□□□□□ -1.02
PTPN4-204ENST00000431283 SCARA3Q6AZY7 606 aa8.69□□□□□ -1.02
PTPN4-204ENST00000431283 PLD6Q8N2A8 252 aaKnown RBP8.69□□□□□ -1.02
PTPN4-204ENST00000431283 GRIN3AQ8TCU5 1115 aa8.69□□□□□ -1.02
PTPN4-204ENST00000431283 FMNL2Q96PY5 1086 aa8.69□□□□□ -1.02
PTPN4-204ENST00000431283 TTF2Q9UNY4 1162 aaKnown RBP8.69□□□□□ -1.02
PTPN4-204ENST00000431283 PAGE1O75459 146 aa8.68□□□□□ -1.02
PTPN4-204ENST00000431283 LEFTY1O75610 366 aa8.68□□□□□ -1.02
PTPN4-204ENST00000431283 P4HBP07237 508 aaKnown RBP8.68□□□□□ -1.02
PTPN4-204ENST00000431283 BMP6P22004 513 aa8.68□□□□□ -1.02
PTPN4-204ENST00000431283 IFI16Q16666 785 aaKnown RBP8.68□□□□□ -1.02
PTPN4-204ENST00000431283 PPM1JQ5JR12 505 aa8.68□□□□□ -1.02
PTPN4-204ENST00000431283 KCT2Q8NC54 265 aa8.68□□□□□ -1.02
PTPN4-204ENST00000431283 ASIC4Q96FT7 647 aa8.68□□□□□ -1.02
PTPN4-204ENST00000431283 GTF2IRD1Q9UHL9 959 aa8.68□□□□□ -1.02
PTPN4-204ENST00000431283 FANCGO15287 622 aa8.67□□□□□ -1.02
PTPN4-204ENST00000431283 EIF4BP23588 611 aaKnown RBP8.67□□□□□ -1.02
PTPN4-204ENST00000431283 PCNX4Q63HM2 1172 aa8.67□□□□□ -1.02
PTPN4-204ENST00000431283 MPRIPQ6WCQ1 1025 aa8.67□□□□□ -1.02
PTPN4-204ENST00000431283 C12orf40Q86WS4 652 aa8.67□□□□□ -1.02
PTPN4-204ENST00000431283 ANKRD24Q8TF21 1146 aa8.67□□□□□ -1.02
PTPN4-204ENST00000431283 MKNK2Q9HBH9 465 aa8.67□□□□□ -1.02
PTPN4-204ENST00000431283 TMEM265A0A087WTH1 108 aa8.66□□□□□ -1.02
PTPN4-204ENST00000431283 JUNBP17275 347 aaPredicted RBP8.66□□□□□ -1.02
PTPN4-204ENST00000431283 ITIH2P19823 946 aa8.66□□□□□ -1.02
PTPN4-204ENST00000431283 ZNF574Q6ZN55 896 aaPredicted RBP8.66□□□□□ -1.02
PTPN4-204ENST00000431283 NFXL1Q6ZNB6 911 aa8.66□□□□□ -1.02
PTPN4-204ENST00000431283 HRASLS5Q96KN8 279 aa8.66□□□□□ -1.02
PTPN4-204ENST00000431283 VAV3Q9UKW4 847 aa8.66□□□□□ -1.02
PTPN4-204ENST00000431283 BIN1O00499 593 aa8.65□□□□□ -1.02
PTPN4-204ENST00000431283 CEACAM5P06731 702 aa8.65□□□□□ -1.02
PTPN4-204ENST00000431283 CELA3AP09093 270 aa8.65□□□□□ -1.02
PTPN4-204ENST00000431283 GNA15P30679 374 aa8.65□□□□□ -1.02
PTPN4-204ENST00000431283 PRKCQQ04759 706 aa8.65□□□□□ -1.02
PTPN4-204ENST00000431283 BNIP3Q12983 259 aa8.65□□□□□ -1.02
PTPN4-204ENST00000431283 CBLL1Q75N03 491 aa8.65□□□□□ -1.02
PTPN4-204ENST00000431283 SV2BQ7L1I2 683 aa8.65□□□□□ -1.02
PTPN4-204ENST00000431283 PRDM10Q9NQV6 1147 aa8.65□□□□□ -1.02
PTPN4-204ENST00000431283 CACNA2D2Q9NY47 1150 aa8.65□□□□□ -1.02
PTPN4-204ENST00000431283 AOC3Q16853 763 aa8.64□□□□□ -1.03
PTPN4-204ENST00000431283 ZBTB37Q5TC79 503 aa8.64□□□□□ -1.03
PTPN4-204ENST00000431283 HDXQ7Z353 690 aa8.64□□□□□ -1.03
PTPN4-204ENST00000431283 SPRED2Q7Z698 418 aa8.64□□□□□ -1.03
PTPN4-204ENST00000431283 ZNF507Q8TCN5 953 aa8.64□□□□□ -1.03
PTPN4-204ENST00000431283 PRAMEF27A3QJZ7 478 aa8.63□□□□□ -1.03
PTPN4-204ENST00000431283 GNAT3A8MTJ3 354 aa8.63□□□□□ -1.03
PTPN4-204ENST00000431283 PRPF40AO75400 957 aaKnown RBP8.63□□□□□ -1.03
PTPN4-204ENST00000431283 OXCT1P55809 520 aa8.63□□□□□ -1.03
PTPN4-204ENST00000431283 ZNF792Q3KQV3 632 aa8.63□□□□□ -1.03
PTPN4-204ENST00000431283 YBX3P16989 372 aaKnown RBP eCLIP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms