RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 WDR66Q8TBY9 1149 aa11□□□□□ -0.65
SNX13-203ENST00000428135 PAIP2Q9BPZ3 127 aaKnown RBP11□□□□□ -0.65
SNX13-203ENST00000428135 HELLSQ9NRZ9 838 aa11□□□□□ -0.65
SNX13-203ENST00000428135 H7C1D1 291 aa10.99□□□□□ -0.65
SNX13-203ENST00000428135 CTSWP56202 376 aa10.99□□□□□ -0.65
SNX13-203ENST00000428135 MKRN3Q13064 507 aaKnown RBP10.99□□□□□ -0.65
SNX13-203ENST00000428135 R3HDM1Q15032 1099 aaKnown RBP10.99□□□□□ -0.65
SNX13-203ENST00000428135 STAMQ92783 540 aa10.99□□□□□ -0.65
SNX13-203ENST00000428135 CLRN2A0PK11 232 aa10.99□□□□□ -0.65
SNX13-203ENST00000428135 KRT9P35527 623 aa10.99□□□□□ -0.65
SNX13-203ENST00000428135 RPS8P62241 208 aaKnown RBP10.99□□□□□ -0.65
SNX13-203ENST00000428135 DPY19L2Q6NUT2 758 aa10.99□□□□□ -0.65
SNX13-203ENST00000428135 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.99□□□□□ -0.65
SNX13-203ENST00000428135 HS2ST1Q7LGA3 356 aa10.99□□□□□ -0.65
SNX13-203ENST00000428135 CTNND2Q9UQB3 1225 aa10.99□□□□□ -0.65
SNX13-203ENST00000428135 NEURL1BA8MQ27 555 aa10.99□□□□□ -0.65
SNX13-203ENST00000428135 ERVV-2B6SEH9 535 aa10.99□□□□□ -0.65
SNX13-203ENST00000428135 CNGA1P29973 690 aa10.99□□□□□ -0.65
SNX13-203ENST00000428135 TFAP4Q01664 338 aa10.99□□□□□ -0.65
SNX13-203ENST00000428135 LRRC24Q50LG9 513 aa10.99□□□□□ -0.65
SNX13-203ENST00000428135 GSTA5Q7RTV2 222 aa10.99□□□□□ -0.65
SNX13-203ENST00000428135 CCDC186Q7Z3E2 898 aa10.99□□□□□ -0.65
SNX13-203ENST00000428135 GADL1Q6ZQY3 521 aa10.99□□□□□ -0.65
SNX13-203ENST00000428135 DYMQ7RTS9 669 aa10.99□□□□□ -0.65
SNX13-203ENST00000428135 APPBP2Q92624 585 aa10.99□□□□□ -0.65
SNX13-203ENST00000428135 SEC62Q99442 399 aaKnown RBP10.99□□□□□ -0.65
SNX13-203ENST00000428135 CHL1O00533 1208 aa10.98□□□□□ -0.65
SNX13-203ENST00000428135 RPS6KB1P23443 525 aa10.98□□□□□ -0.65
SNX13-203ENST00000428135 SH2D4AQ9H788 454 aa10.98□□□□□ -0.65
SNX13-203ENST00000428135 WDR17Q8IZU2 1322 aa10.98□□□□□ -0.65
SNX13-203ENST00000428135 PER1O15534 1290 aaPredicted RBP10.98□□□□□ -0.65
SNX13-203ENST00000428135 BMP15O95972 392 aa10.98□□□□□ -0.65
SNX13-203ENST00000428135 PDE6BP35913 854 aa10.98□□□□□ -0.65
SNX13-203ENST00000428135 RBM6P78332 1123 aaKnown RBP10.98□□□□□ -0.65
SNX13-203ENST00000428135 IRX3P78415 501 aaPredicted RBP10.98□□□□□ -0.65
SNX13-203ENST00000428135 KIAA0753Q2KHM9 967 aa10.98□□□□□ -0.65
SNX13-203ENST00000428135 USP26Q9BXU7 913 aa10.98□□□□□ -0.65
SNX13-203ENST00000428135 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.98□□□□□ -0.65
SNX13-203ENST00000428135 AXIN2Q9Y2T1 843 aa10.98□□□□□ -0.65
SNX13-203ENST00000428135 V9GYY5 206 aaPredicted RBP10.98□□□□□ -0.65
SNX13-203ENST00000428135 ALDH1B1P30837 517 aa10.98□□□□□ -0.65
SNX13-203ENST00000428135 FAM47CQ5HY64 1035 aa10.98□□□□□ -0.65
SNX13-203ENST00000428135 TRERF1Q96PN7 1200 aa10.98□□□□□ -0.65
SNX13-203ENST00000428135 RBM28Q9NW13 759 aaKnown RBP10.98□□□□□ -0.65
SNX13-203ENST00000428135 PRDM15P57071 1507 aaPredicted RBP10.98□□□□□ -0.65
SNX13-203ENST00000428135 SMIM23A6NLE4 172 aa10.98□□□□□ -0.65
SNX13-203ENST00000428135 GSDMDP57764 484 aa10.98□□□□□ -0.65
SNX13-203ENST00000428135 LRRC47Q8N1G4 583 aaKnown RBP10.98□□□□□ -0.65
SNX13-203ENST00000428135 GOLGA6L7A0A1B0GV03 622 aa10.98□□□□□ -0.65
SNX13-203ENST00000428135 USP37Q86T82 979 aa10.98□□□□□ -0.65
SNX13-203ENST00000428135 PREX2Q70Z35 1606 aa10.98□□□□□ -0.65
SNX13-203ENST00000428135 ARAP3Q8WWN8 1544 aa10.97□□□□□ -0.65
SNX13-203ENST00000428135 TRAF5O00463 557 aa10.97□□□□□ -0.65
SNX13-203ENST00000428135 GOLGA8HP0CJ92 632 aa10.97□□□□□ -0.65
SNX13-203ENST00000428135 TCIRG1Q13488 830 aa10.97□□□□□ -0.65
SNX13-203ENST00000428135 SPATA31A3Q5VYP0 1347 aa10.97□□□□□ -0.65
SNX13-203ENST00000428135 SYT1P21579 422 aa10.97□□□□□ -0.65
SNX13-203ENST00000428135 MTERF4Q7Z6M4 381 aaKnown RBP10.97□□□□□ -0.65
SNX13-203ENST00000428135 GJD4Q96KN9 370 aaPredicted RBP10.97□□□□□ -0.65
SNX13-203ENST00000428135 LZTFL1Q9NQ48 299 aa10.97□□□□□ -0.65
SNX13-203ENST00000428135 RNF187Q5TA31 235 aaPredicted RBP10.97□□□□□ -0.65
SNX13-203ENST00000428135 TAOK3Q9H2K8 898 aa10.97□□□□□ -0.65
SNX13-203ENST00000428135 PROSER3Q2NL68 480 aa10.97□□□□□ -0.65
SNX13-203ENST00000428135 RNF169Q8NCN4 708 aa10.97□□□□□ -0.65
SNX13-203ENST00000428135 TRIM6Q9C030 488 aaPredicted RBP10.97□□□□□ -0.65
SNX13-203ENST00000428135 VPS54Q9P1Q0 977 aa10.97□□□□□ -0.65
SNX13-203ENST00000428135 DNAI1Q9UI46 699 aa10.97□□□□□ -0.65
SNX13-203ENST00000428135 ATP2C2O75185 946 aa10.97□□□□□ -0.65
SNX13-203ENST00000428135 SERPINB2P05120 415 aa10.97□□□□□ -0.65
SNX13-203ENST00000428135 PPARDQ03181 441 aa10.97□□□□□ -0.65
SNX13-203ENST00000428135 MAP9Q49MG5 647 aa10.97□□□□□ -0.65
SNX13-203ENST00000428135 LRSAM1Q6UWE0 723 aa10.97□□□□□ -0.65
SNX13-203ENST00000428135 FNBP1Q96RU3 617 aa10.97□□□□□ -0.65
SNX13-203ENST00000428135 IFNKQ9P0W0 207 aa10.97□□□□□ -0.65
SNX13-203ENST00000428135 SNX14Q9Y5W7 946 aa10.97□□□□□ -0.65
SNX13-203ENST00000428135 PABPN1LA6NDY0 278 aaKnown RBP10.96□□□□□ -0.65
SNX13-203ENST00000428135 USP17L12C9JPN9 530 aa10.96□□□□□ -0.65
SNX13-203ENST00000428135 USP17L21D6R901 530 aa10.96□□□□□ -0.65
SNX13-203ENST00000428135 SKILP12757 684 aa10.96□□□□□ -0.65
SNX13-203ENST00000428135 SV2BQ7L1I2 683 aa10.96□□□□□ -0.65
SNX13-203ENST00000428135 NEK11Q8NG66 645 aa10.96□□□□□ -0.65
SNX13-203ENST00000428135 PIGBQ92521 554 aa10.96□□□□□ -0.65
SNX13-203ENST00000428135 GUCA1BQ9UMX6 200 aa10.96□□□□□ -0.65
SNX13-203ENST00000428135 ARHGEF5Q12774 1597 aa10.96□□□□□ -0.65
SNX13-203ENST00000428135 ZBED4O75132 1171 aa10.96□□□□□ -0.65
SNX13-203ENST00000428135 TYRO3Q06418 890 aa10.96□□□□□ -0.65
SNX13-203ENST00000428135 SPOUT1Q5T280 376 aaKnown RBP10.96□□□□□ -0.65
SNX13-203ENST00000428135 PUS7Q96PZ0 661 aaKnown RBP10.96□□□□□ -0.65
SNX13-203ENST00000428135 VPS16Q9H269 839 aa10.96□□□□□ -0.65
SNX13-203ENST00000428135 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.96□□□□□ -0.652e-8■■■■■ 31.6
SNX13-203ENST00000428135 MAP3K4Q9Y6R4 1608 aa10.96□□□□□ -0.65
SNX13-203ENST00000428135 MMP10P09238 476 aa10.96□□□□□ -0.65
SNX13-203ENST00000428135 RNASE9P60153 205 aaKnown RBP10.96□□□□□ -0.65
SNX13-203ENST00000428135 PDE4DQ08499 809 aa10.96□□□□□ -0.65
SNX13-203ENST00000428135 GPR101Q96P66 508 aaPredicted RBP10.96□□□□□ -0.65
SNX13-203ENST00000428135 GREM2Q9H772 168 aa10.96□□□□□ -0.65
SNX13-203ENST00000428135 TTC12Q9H892 705 aaPredicted RBP10.96□□□□□ -0.65
SNX13-203ENST00000428135 DBNDD1Q9H9R9 158 aa10.96□□□□□ -0.65
SNX13-203ENST00000428135 PTPRTO14522 1441 aa10.96□□□□□ -0.66
SNX13-203ENST00000428135 FSD2A1L4K1 749 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms