RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 TMEM39BQ9GZU3 492 aa18.17■□□□□ 0.5
VARS2-203ENST00000428017 TRAF5O00463 557 aa18.16■□□□□ 0.5
VARS2-203ENST00000428017 CDC45O75419 566 aa18.16■□□□□ 0.5
VARS2-203ENST00000428017 CHMLP26374 656 aa18.16■□□□□ 0.5
VARS2-203ENST00000428017 AMOTL1Q8IY63 956 aa18.16■□□□□ 0.5
VARS2-203ENST00000428017 NACAP1Q9BZK3 213 aa18.16■□□□□ 0.5
VARS2-203ENST00000428017 OSBPL5Q9H0X9 879 aaPredicted RBP18.16■□□□□ 0.5
VARS2-203ENST00000428017 ZNF408Q9H9D4 720 aa18.16■□□□□ 0.5
VARS2-203ENST00000428017 DDX4Q9NQI0 724 aaKnown RBP18.16■□□□□ 0.5
VARS2-203ENST00000428017 ATP8A2Q9NTI2 1148 aa18.16■□□□□ 0.5
VARS2-203ENST00000428017 FLT1P17948 1338 aa18.16■□□□□ 0.5
VARS2-203ENST00000428017 CNTNAP1P78357 1384 aa18.16■□□□□ 0.5
VARS2-203ENST00000428017 ITGBL1O95965 494 aaPredicted RBP18.15■□□□□ 0.5
VARS2-203ENST00000428017 PRAMEF18Q5VWM3 479 aa18.15■□□□□ 0.5
VARS2-203ENST00000428017 SDR42E1Q8WUS8 393 aa18.15■□□□□ 0.5
VARS2-203ENST00000428017 DHX36Q9H2U1 1008 aaKnown RBP18.15■□□□□ 0.5
VARS2-203ENST00000428017 MYO5AQ9Y4I1 1855 aaKnown RBP18.14■□□□□ 0.49
VARS2-203ENST00000428017 PRKAB2O43741 272 aa18.14■□□□□ 0.49
VARS2-203ENST00000428017 POLR3DP05423 398 aaPredicted RBP18.14■□□□□ 0.49
VARS2-203ENST00000428017 CCDC129Q6ZRS4 1044 aa18.14■□□□□ 0.49
VARS2-203ENST00000428017 ZFPM1Q8IX07 1006 aa18.14■□□□□ 0.49
VARS2-203ENST00000428017 CSRNP1Q96S65 589 aa18.14■□□□□ 0.49
VARS2-203ENST00000428017 SAP30BPQ9UHR5 308 aaKnown RBP18.14■□□□□ 0.49
VARS2-203ENST00000428017 CCDC171Q6TFL3 1326 aa18.14■□□□□ 0.49
VARS2-203ENST00000428017 RAD50Q92878 1312 aa18.14■□□□□ 0.49
VARS2-203ENST00000428017 RPAP1Q9BWH6 1393 aaPredicted RBP18.14■□□□□ 0.49
VARS2-203ENST00000428017 CELF2O95319 508 aaKnown RBP18.13■□□□□ 0.49
VARS2-203ENST00000428017 HLA-DOAP06340 250 aa18.13■□□□□ 0.49
VARS2-203ENST00000428017 TDO2P48775 406 aa18.13■□□□□ 0.49
VARS2-203ENST00000428017 TTLL12Q14166 644 aaPredicted RBP18.13■□□□□ 0.49
VARS2-203ENST00000428017 NBPF12Q5TAG4 269 aaPredicted RBP18.13■□□□□ 0.49
VARS2-203ENST00000428017 DLK2Q6UY11 383 aa18.13■□□□□ 0.49
VARS2-203ENST00000428017 TRIM34Q9BYJ4 488 aa18.13■□□□□ 0.49
VARS2-203ENST00000428017 DCP1AQ9NPI6 582 aaPredicted RBP18.13■□□□□ 0.49
VARS2-203ENST00000428017 MCM9Q9NXL9 1143 aa18.13■□□□□ 0.49
VARS2-203ENST00000428017 PATL2C9JE40 543 aaKnown RBP18.12■□□□□ 0.49
VARS2-203ENST00000428017 GIMAP6Q6P9H5 292 aa18.12■□□□□ 0.49
VARS2-203ENST00000428017 TTC6Q86TZ1 520 aa18.12■□□□□ 0.49
VARS2-203ENST00000428017 ZNF589Q86UQ0 364 aaPredicted RBP18.12■□□□□ 0.49
VARS2-203ENST00000428017 TEPSINQ96N21 525 aa18.12■□□□□ 0.49
VARS2-203ENST00000428017 DDTLA6NHG4 134 aaPredicted RBP18.11■□□□□ 0.49
VARS2-203ENST00000428017 PPP1R12BO60237 982 aaPredicted RBP18.11■□□□□ 0.49
VARS2-203ENST00000428017 FMR1Q06787 632 aaKnown RBP eCLIP18.11■□□□□ 0.49
VARS2-203ENST00000428017 DCAF15Q66K64 600 aa18.11■□□□□ 0.49
VARS2-203ENST00000428017 KIAA1211Q6ZU35 1233 aa18.11■□□□□ 0.49
VARS2-203ENST00000428017 CRACR2BQ8N4Y2 399 aaPredicted RBP18.11■□□□□ 0.49
VARS2-203ENST00000428017 C2orf69Q8N8R5 385 aa18.11■□□□□ 0.49
VARS2-203ENST00000428017 NAPBQ9H115 298 aa18.11■□□□□ 0.49
VARS2-203ENST00000428017 PI4KBQ9UBF8 816 aa18.11■□□□□ 0.49
VARS2-203ENST00000428017 PALD1Q9ULE6 856 aa18.11■□□□□ 0.49
VARS2-203ENST00000428017 PASKQ96RG2 1323 aa18.11■□□□□ 0.49
VARS2-203ENST00000428017 ATRNL1Q5VV63 1379 aa18.11■□□□□ 0.49
VARS2-203ENST00000428017 MYH7P12883 1935 aa18.11■□□□□ 0.49
VARS2-203ENST00000428017 ECM29Q5VYK3 1845 aa18.1■□□□□ 0.49
VARS2-203ENST00000428017 COL2A1P02458 1487 aaPredicted RBP18.1■□□□□ 0.49
VARS2-203ENST00000428017 GSG1L2A8MUP6 293 aa18.1■□□□□ 0.49
VARS2-203ENST00000428017 SLC4A8Q2Y0W8 1093 aa18.1■□□□□ 0.49
VARS2-203ENST00000428017 SH3BP5LQ7L8J4 393 aa18.1■□□□□ 0.49
VARS2-203ENST00000428017 CDAN1Q8IWY9 1227 aa18.1■□□□□ 0.49
VARS2-203ENST00000428017 ARPP21Q9UBL0 812 aaPredicted RBP18.1■□□□□ 0.49
VARS2-203ENST00000428017 USP17L12C9JPN9 530 aa18.09■□□□□ 0.49
VARS2-203ENST00000428017 USP17L21D6R901 530 aa18.09■□□□□ 0.49
VARS2-203ENST00000428017 PRKG1Q13976 671 aa18.09■□□□□ 0.49
VARS2-203ENST00000428017 MIGA2Q7L4E1 593 aa18.09■□□□□ 0.49
VARS2-203ENST00000428017 ARMC9Q7Z3E5 817 aa18.09■□□□□ 0.49
VARS2-203ENST00000428017 IFNL3Q8IZI9 196 aa18.09■□□□□ 0.49
VARS2-203ENST00000428017 ESYT1Q9BSJ8 1104 aa18.09■□□□□ 0.49
VARS2-203ENST00000428017 GBA2Q9HCG7 927 aaPredicted RBP18.09■□□□□ 0.49
VARS2-203ENST00000428017 MKRN1Q9UHC7 482 aaKnown RBP18.09■□□□□ 0.49
VARS2-203ENST00000428017 TMEM88BA6NKF7 163 aa18.08■□□□□ 0.48
VARS2-203ENST00000428017 SGSM2O43147 1006 aa18.08■□□□□ 0.48
VARS2-203ENST00000428017 HSPD1P10809 573 aaKnown RBP18.08■□□□□ 0.48
VARS2-203ENST00000428017 IREB2P48200 963 aaKnown RBP18.08■□□□□ 0.48
VARS2-203ENST00000428017 FKBP1BP68106 108 aa18.08■□□□□ 0.48
VARS2-203ENST00000428017 VPS53Q5VIR6 699 aa18.08■□□□□ 0.48
VARS2-203ENST00000428017 FOXP4Q8IVH2 680 aaPredicted RBP18.08■□□□□ 0.48
VARS2-203ENST00000428017 ZNF341Q9BYN7 854 aa18.08■□□□□ 0.48
VARS2-203ENST00000428017 MINDY4BA8MYZ0 360 aa18.07■□□□□ 0.48
VARS2-203ENST00000428017 APLP1P51693 650 aa18.07■□□□□ 0.48
VARS2-203ENST00000428017 C1QTNF8P60827 252 aa18.07■□□□□ 0.48
VARS2-203ENST00000428017 CTR9Q6PD62 1173 aa18.07■□□□□ 0.48
VARS2-203ENST00000428017 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.07■□□□□ 0.48
VARS2-203ENST00000428017 EPB41L4AQ9HCS5 686 aaPredicted RBP18.07■□□□□ 0.48
VARS2-203ENST00000428017 HERC5Q9UII4 1024 aaKnown RBP18.07■□□□□ 0.48
VARS2-203ENST00000428017 SERPINB13Q9UIV8 391 aa18.07■□□□□ 0.48
VARS2-203ENST00000428017 ANGEL1Q9UNK9 670 aaKnown RBP18.07■□□□□ 0.48
VARS2-203ENST00000428017 AK9Q5TCS8 1911 aa18.07■□□□□ 0.48
VARS2-203ENST00000428017 SLC3A2P08195 630 aaKnown RBP18.06■□□□□ 0.48
VARS2-203ENST00000428017 C12orf60Q5U649 245 aa18.06■□□□□ 0.48
VARS2-203ENST00000428017 CST9Q5W186 159 aa18.06■□□□□ 0.48
VARS2-203ENST00000428017 DSCC1Q9BVC3 393 aa18.06■□□□□ 0.48
VARS2-203ENST00000428017 EHD4Q9H223 541 aa18.06■□□□□ 0.48
VARS2-203ENST00000428017 CTNNA3Q9UI47 895 aa18.06■□□□□ 0.48
VARS2-203ENST00000428017 ABT1Q9ULW3 272 aaKnown RBP18.06■□□□□ 0.48
VARS2-203ENST00000428017 TBC1D12O60347 775 aa18.05■□□□□ 0.48
VARS2-203ENST00000428017 CYP2D6P10635 497 aa18.05■□□□□ 0.48
VARS2-203ENST00000428017 PLCD1P51178 756 aa18.05■□□□□ 0.48
VARS2-203ENST00000428017 ALX1Q15699 326 aa18.05■□□□□ 0.48
VARS2-203ENST00000428017 SBK1Q52WX2 424 aa18.05■□□□□ 0.48
VARS2-203ENST00000428017 WRNIP1Q96S55 665 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms