RNA–Protein interactions for RNA: ENST00000426678.1

NCKIPSD-205, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 5

Gene NCKIPSD, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-205ENST00000426678 LRRCC1Q9C099 1032 aa17.73■□□□□ 0.43
NCKIPSD-205ENST00000426678 DDX4Q9NQI0 724 aaKnown RBP17.73■□□□□ 0.43
NCKIPSD-205ENST00000426678 ALDH1A1P00352 501 aa17.72■□□□□ 0.43
NCKIPSD-205ENST00000426678 PLCG2P16885 1265 aa17.72■□□□□ 0.43
NCKIPSD-205ENST00000426678 GJA5P36382 358 aa17.72■□□□□ 0.43
NCKIPSD-205ENST00000426678 TEX11Q8IYF3 940 aa17.72■□□□□ 0.43
NCKIPSD-205ENST00000426678 ZKSCAN4Q969J2 545 aaPredicted RBP17.72■□□□□ 0.43
NCKIPSD-205ENST00000426678 AATFQ9NY61 560 aaKnown RBP eCLIP17.72■□□□□ 0.43
NCKIPSD-205ENST00000426678 SNCAIPQ9Y6H5 919 aa17.72■□□□□ 0.43
NCKIPSD-205ENST00000426678 NDUFB9Q9Y6M9 179 aa17.72■□□□□ 0.43
NCKIPSD-205ENST00000426678 SPDYE5A6NIY4 337 aa17.71■□□□□ 0.43
NCKIPSD-205ENST00000426678 NPM3O75607 178 aaKnown RBP17.71■□□□□ 0.43
NCKIPSD-205ENST00000426678 TTF1Q15361 905 aaPredicted RBP17.71■□□□□ 0.43
NCKIPSD-205ENST00000426678 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.71■□□□□ 0.43
NCKIPSD-205ENST00000426678 OTUD5Q96G74 571 aa17.71■□□□□ 0.43
NCKIPSD-205ENST00000426678 DDTLA6NHG4 134 aaPredicted RBP17.7■□□□□ 0.42
NCKIPSD-205ENST00000426678 CYP7A1P22680 504 aa17.7■□□□□ 0.42
NCKIPSD-205ENST00000426678 INPP5BP32019 993 aa17.7■□□□□ 0.42
NCKIPSD-205ENST00000426678 MAP3K12Q12852 859 aa17.7■□□□□ 0.42
NCKIPSD-205ENST00000426678 OTUD7BQ6GQQ9 843 aa17.7■□□□□ 0.42
NCKIPSD-205ENST00000426678 ERO1BQ86YB8 467 aa17.7■□□□□ 0.42
NCKIPSD-205ENST00000426678 IFNL1Q8IU54 200 aa17.7■□□□□ 0.42
NCKIPSD-205ENST00000426678 SH3RF3Q8TEJ3 882 aaPredicted RBP17.7■□□□□ 0.42
NCKIPSD-205ENST00000426678 CNKSR2Q8WXI2 1034 aa17.7■□□□□ 0.42
NCKIPSD-205ENST00000426678 DNAJC2Q99543 621 aaKnown RBP17.7■□□□□ 0.42
NCKIPSD-205ENST00000426678 COL2A1P02458 1487 aaPredicted RBP17.69■□□□□ 0.42
NCKIPSD-205ENST00000426678 ATRNL1Q5VV63 1379 aa17.69■□□□□ 0.42
NCKIPSD-205ENST00000426678 TBC1D8O95759 1140 aa17.69■□□□□ 0.42
NCKIPSD-205ENST00000426678 GTF2A2P52657 109 aa17.69■□□□□ 0.42
NCKIPSD-205ENST00000426678 TMED8Q6PL24 325 aaPredicted RBP17.69■□□□□ 0.42
NCKIPSD-205ENST00000426678 SH3BP5LQ7L8J4 393 aa17.69■□□□□ 0.42
NCKIPSD-205ENST00000426678 ADGRA1Q86SQ6 560 aa17.69■□□□□ 0.42
NCKIPSD-205ENST00000426678 MAGEB6Q8N7X4 407 aa17.69■□□□□ 0.42
NCKIPSD-205ENST00000426678 CRBNQ96SW2 442 aa17.69■□□□□ 0.42
NCKIPSD-205ENST00000426678 OSBPL5Q9H0X9 879 aaPredicted RBP17.69■□□□□ 0.42
NCKIPSD-205ENST00000426678 ANTXR1Q9H6X2 564 aa17.69■□□□□ 0.42
NCKIPSD-205ENST00000426678 DCTPP1Q9H773 170 aa17.69■□□□□ 0.42
NCKIPSD-205ENST00000426678 ZNF112Q9UJU3 913 aa17.69■□□□□ 0.42
NCKIPSD-205ENST00000426678 PPP4CP60510 307 aa17.68■□□□□ 0.42
NCKIPSD-205ENST00000426678 CERS3Q8IU89 383 aa17.68■□□□□ 0.42
NCKIPSD-205ENST00000426678 CDK5RAP2Q96SN8 1893 aa17.67■□□□□ 0.42
NCKIPSD-205ENST00000426678 CCL15-CCL14A0A0B4J2E2 113 aa17.67■□□□□ 0.42
NCKIPSD-205ENST00000426678 TESPA1A2RU30 521 aaPredicted RBP17.67■□□□□ 0.42
NCKIPSD-205ENST00000426678 IGF2BP3O00425 579 aaKnown RBP eCLIP17.67■□□□□ 0.42
NCKIPSD-205ENST00000426678 GOLIM4O00461 696 aa17.67■□□□□ 0.42
NCKIPSD-205ENST00000426678 SMARCA5O60264 1052 aaPredicted RBP17.67■□□□□ 0.42
NCKIPSD-205ENST00000426678 PPATQ06203 517 aa17.67■□□□□ 0.42
NCKIPSD-205ENST00000426678 PPIL2Q13356 520 aa17.67■□□□□ 0.42
NCKIPSD-205ENST00000426678 CCL15Q16663 113 aa17.67■□□□□ 0.42
NCKIPSD-205ENST00000426678 NOL9Q5SY16 702 aaKnown RBP17.67■□□□□ 0.42
NCKIPSD-205ENST00000426678 MS4A4AQ96JQ5 239 aa17.67■□□□□ 0.42
NCKIPSD-205ENST00000426678 CFHR5Q9BXR6 569 aa17.67■□□□□ 0.42
NCKIPSD-205ENST00000426678 PCDHB15Q9Y5E8 787 aa17.67■□□□□ 0.42
NCKIPSD-205ENST00000426678 FOCADQ5VW36 1801 aa17.67■□□□□ 0.42
NCKIPSD-205ENST00000426678 ATP5JP18859 108 aa17.66■□□□□ 0.42
NCKIPSD-205ENST00000426678 SNAPC2Q13487 334 aa17.66■□□□□ 0.42
NCKIPSD-205ENST00000426678 MIGA1Q8NAN2 632 aa17.66■□□□□ 0.42
NCKIPSD-205ENST00000426678 TGFBRAP1Q8WUH2 860 aa17.66■□□□□ 0.42
NCKIPSD-205ENST00000426678 DOCK1Q14185 1865 aa17.65■□□□□ 0.42
NCKIPSD-205ENST00000426678 GPR25O00155 361 aa17.65■□□□□ 0.42
NCKIPSD-205ENST00000426678 IRF6O14896 467 aa17.65■□□□□ 0.42
NCKIPSD-205ENST00000426678 CAPN15O75808 1086 aa17.65■□□□□ 0.42
NCKIPSD-205ENST00000426678 CETPP11597 493 aa17.65■□□□□ 0.42
NCKIPSD-205ENST00000426678 DYNLL1P63167 89 aaKnown RBP17.65■□□□□ 0.42
NCKIPSD-205ENST00000426678 MAP3K10Q02779 954 aa17.65■□□□□ 0.42
NCKIPSD-205ENST00000426678 DGKZQ13574 1117 aa17.65■□□□□ 0.42
NCKIPSD-205ENST00000426678 NOM1Q5C9Z4 860 aaKnown RBP17.65■□□□□ 0.42
NCKIPSD-205ENST00000426678 MAPKAPK5Q8IW41 473 aa17.65■□□□□ 0.42
NCKIPSD-205ENST00000426678 SCYL3Q8IZE3 742 aa17.65■□□□□ 0.42
NCKIPSD-205ENST00000426678 BRI3BPQ8WY22 251 aa17.65■□□□□ 0.42
NCKIPSD-205ENST00000426678 GPATCH3Q96I76 525 aa17.65■□□□□ 0.42
NCKIPSD-205ENST00000426678 DHX36Q9H2U1 1008 aaKnown RBP17.65■□□□□ 0.42
NCKIPSD-205ENST00000426678 BOLA2Q9H3K6 86 aa17.65■□□□□ 0.42
NCKIPSD-205ENST00000426678 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.65■□□□□ 0.42
NCKIPSD-205ENST00000426678 PICK1Q9NRD5 415 aa17.65■□□□□ 0.42
NCKIPSD-205ENST00000426678 PAG1Q9NWQ8 432 aa17.65■□□□□ 0.42
NCKIPSD-205ENST00000426678 FLT1P17948 1338 aa17.65■□□□□ 0.42
NCKIPSD-205ENST00000426678 PHF20L1A8MW92 1017 aa17.64■□□□□ 0.41
NCKIPSD-205ENST00000426678 TBC1D12O60347 775 aa17.64■□□□□ 0.41
NCKIPSD-205ENST00000426678 PDE6AP16499 860 aa17.64■□□□□ 0.41
NCKIPSD-205ENST00000426678 SLC9C2Q5TAH2 1124 aa17.64■□□□□ 0.41
NCKIPSD-205ENST00000426678 ZNF296Q8WUU4 475 aaPredicted RBP17.64■□□□□ 0.41
NCKIPSD-205ENST00000426678 PTPN18Q99952 460 aa17.64■□□□□ 0.41
NCKIPSD-205ENST00000426678 FAM196BA6NMK8 535 aa17.63■□□□□ 0.41
NCKIPSD-205ENST00000426678 SLURP2P0DP57 97 aa17.63■□□□□ 0.41
NCKIPSD-205ENST00000426678 USP5P45974 858 aa17.63■□□□□ 0.41
NCKIPSD-205ENST00000426678 EDC3Q96F86 508 aaKnown RBP17.63■□□□□ 0.41
NCKIPSD-205ENST00000426678 HAUS7Q99871 368 aa17.63■□□□□ 0.41
NCKIPSD-205ENST00000426678 TRIM34Q9BYJ4 488 aa17.63■□□□□ 0.41
NCKIPSD-205ENST00000426678 MCOLN1Q9GZU1 580 aa17.63■□□□□ 0.41
NCKIPSD-205ENST00000426678 ECHDC1Q9NTX5 307 aa17.63■□□□□ 0.41
NCKIPSD-205ENST00000426678 PI4KBQ9UBF8 816 aa17.63■□□□□ 0.41
NCKIPSD-205ENST00000426678 HERC5Q9UII4 1024 aaKnown RBP17.63■□□□□ 0.41
NCKIPSD-205ENST00000426678 CTNND1O60716 968 aaKnown RBP17.62■□□□□ 0.41
NCKIPSD-205ENST00000426678 FKTNO75072 461 aa17.62■□□□□ 0.41
NCKIPSD-205ENST00000426678 HLA-DOAP06340 250 aa17.62■□□□□ 0.41
NCKIPSD-205ENST00000426678 CRHR2Q13324 411 aa17.62■□□□□ 0.41
NCKIPSD-205ENST00000426678 TAF1CQ15572 869 aaPredicted RBP17.62■□□□□ 0.41
NCKIPSD-205ENST00000426678 CTU1Q7Z7A3 348 aaKnown RBP17.62■□□□□ 0.41
NCKIPSD-205ENST00000426678 ABHD8Q96I13 439 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms