RNA–Protein interactions for RNA: ENST00000425804.1

R3HDM1-205, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-205ENST00000425804 SLC26A8Q96RN1 970 aa5.46□□□□□ -1.54
R3HDM1-205ENST00000425804 A0A096LPE4 126 aa5.45□□□□□ -1.54
R3HDM1-205ENST00000425804 A0A1W2PPZ6 126 aa5.45□□□□□ -1.54
R3HDM1-205ENST00000425804 C8orf34Q49A92 452 aa5.45□□□□□ -1.54
R3HDM1-205ENST00000425804 ATXN3LQ9H3M9 355 aa5.45□□□□□ -1.54
R3HDM1-205ENST00000425804 CARS2Q9HA77 564 aaKnown RBP5.45□□□□□ -1.54
R3HDM1-205ENST00000425804 UBTFP17480 764 aaKnown RBP5.44□□□□□ -1.54
R3HDM1-205ENST00000425804 DNM1Q05193 864 aaKnown RBP5.44□□□□□ -1.54
R3HDM1-205ENST00000425804 MARCH10Q8NA82 808 aaPredicted RBP5.44□□□□□ -1.54
R3HDM1-205ENST00000425804 ACIN1Q9UKV3 1341 aaKnown RBP5.44□□□□□ -1.54
R3HDM1-205ENST00000425804 SUV39H1O43463 412 aa5.43□□□□□ -1.54
R3HDM1-205ENST00000425804 RNGTTO60942 597 aaKnown RBP5.43□□□□□ -1.54
R3HDM1-205ENST00000425804 PHACTR2O75167 634 aa5.43□□□□□ -1.54
R3HDM1-205ENST00000425804 PCSK2P16519 638 aa5.43□□□□□ -1.54
R3HDM1-205ENST00000425804 TTLL4Q14679 1199 aa5.43□□□□□ -1.54
R3HDM1-205ENST00000425804 NKPD1Q17RQ9 610 aa5.43□□□□□ -1.54
R3HDM1-205ENST00000425804 FAM214BQ7L5A3 538 aa5.43□□□□□ -1.54
R3HDM1-205ENST00000425804 TTC16Q8NEE8 873 aa5.43□□□□□ -1.54
R3HDM1-205ENST00000425804 WDR89Q96FK6 387 aaPredicted RBP5.43□□□□□ -1.54
R3HDM1-205ENST00000425804 DISC1Q9NRI5 854 aa5.43□□□□□ -1.54
R3HDM1-205ENST00000425804 NOVA2Q9UNW9 492 aaKnown RBP5.43□□□□□ -1.54
R3HDM1-205ENST00000425804 TRIM13O60858 407 aa5.42□□□□□ -1.54
R3HDM1-205ENST00000425804 PDGFAP04085 211 aa5.42□□□□□ -1.54
R3HDM1-205ENST00000425804 CELA3BP08861 270 aa5.42□□□□□ -1.54
R3HDM1-205ENST00000425804 SRFP11831 508 aa5.42□□□□□ -1.54
R3HDM1-205ENST00000425804 HCLS1P14317 486 aaPredicted RBP5.42□□□□□ -1.54
R3HDM1-205ENST00000425804 LIG1P18858 919 aa5.42□□□□□ -1.54
R3HDM1-205ENST00000425804 ID3Q02535 119 aa5.42□□□□□ -1.54
R3HDM1-205ENST00000425804 SPRED3Q2MJR0 410 aa5.42□□□□□ -1.54
R3HDM1-205ENST00000425804 DDX54Q8TDD1 881 aaKnown RBP5.42□□□□□ -1.54
R3HDM1-205ENST00000425804 CXXC1Q9P0U4 656 aaPredicted RBP5.42□□□□□ -1.54
R3HDM1-205ENST00000425804 PCOLCE2Q9UKZ9 415 aa5.42□□□□□ -1.54
R3HDM1-205ENST00000425804 TNFRSF21O75509 655 aa5.41□□□□□ -1.54
R3HDM1-205ENST00000425804 B3GALT4O96024 378 aa5.41□□□□□ -1.54
R3HDM1-205ENST00000425804 GRIA4P48058 902 aa5.41□□□□□ -1.54
R3HDM1-205ENST00000425804 CLCN7P51798 805 aa5.41□□□□□ -1.54
R3HDM1-205ENST00000425804 ZXDCQ2QGD7 858 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-205ENST00000425804 GTF2IRD1Q9UHL9 959 aa5.41□□□□□ -1.54
R3HDM1-205ENST00000425804 IGF2BP3O00425 579 aaKnown RBP eCLIP5.4□□□□□ -1.54
R3HDM1-205ENST00000425804 IGHA2P01877 340 aa5.4□□□□□ -1.54
R3HDM1-205ENST00000425804 PRKCSHP14314 528 aaPredicted RBP5.4□□□□□ -1.54
R3HDM1-205ENST00000425804 ABHD4Q8TB40 342 aa5.4□□□□□ -1.54
R3HDM1-205ENST00000425804 BAHD1Q8TBE0 780 aaPredicted RBP5.4□□□□□ -1.54
R3HDM1-205ENST00000425804 SNX29Q8TEQ0 813 aa5.4□□□□□ -1.54
R3HDM1-205ENST00000425804 XYLT2Q9H1B5 865 aa5.4□□□□□ -1.54
R3HDM1-205ENST00000425804 FOXD3Q9UJU5 478 aaPredicted RBP5.4□□□□□ -1.54
R3HDM1-205ENST00000425804 SLFN14P0C7P3 912 aa5.39□□□□□ -1.55
R3HDM1-205ENST00000425804 RFX1P22670 979 aa5.39□□□□□ -1.55
R3HDM1-205ENST00000425804 FAM69CQ0P6D2 419 aa5.39□□□□□ -1.55
R3HDM1-205ENST00000425804 TCERG1LQ5VWI1 586 aa5.39□□□□□ -1.55
R3HDM1-205ENST00000425804 CCNJLQ8IV13 435 aa5.39□□□□□ -1.55
R3HDM1-205ENST00000425804 CCDC86Q9H6F5 360 aaKnown RBP5.39□□□□□ -1.55
R3HDM1-205ENST00000425804 PCDHGC5Q9Y5F6 944 aa5.39□□□□□ -1.55
R3HDM1-205ENST00000425804 NEFMP07197 916 aa5.38□□□□□ -1.55
R3HDM1-205ENST00000425804 CDCA8Q53HL2 280 aa5.38□□□□□ -1.55
R3HDM1-205ENST00000425804 ATP13A1Q9HD20 1204 aa5.38□□□□□ -1.55
R3HDM1-205ENST00000425804 AMOTL2Q9Y2J4 779 aa5.38□□□□□ -1.55
R3HDM1-205ENST00000425804 GNAT3A8MTJ3 354 aa5.37□□□□□ -1.55
R3HDM1-205ENST00000425804 ZNF862O60290 1169 aa5.37□□□□□ -1.55
R3HDM1-205ENST00000425804 MZF1P28698 734 aaPredicted RBP5.37□□□□□ -1.55
R3HDM1-205ENST00000425804 AP3B2Q13367 1082 aa5.37□□□□□ -1.55
R3HDM1-205ENST00000425804 NPAS4Q8IUM7 802 aa5.37□□□□□ -1.55
R3HDM1-205ENST00000425804 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.37□□□□□ -1.55
R3HDM1-205ENST00000425804 ISL2Q96A47 359 aa5.37□□□□□ -1.55
R3HDM1-205ENST00000425804 CALR3Q96L12 384 aaKnown RBP5.37□□□□□ -1.55
R3HDM1-205ENST00000425804 TCF12Q99081 682 aa5.37□□□□□ -1.55
R3HDM1-205ENST00000425804 ZC3H12CQ9C0D7 883 aaKnown RBP5.37□□□□□ -1.55
R3HDM1-205ENST00000425804 SSU72Q9NP77 194 aaKnown RBP5.37□□□□□ -1.55
R3HDM1-205ENST00000425804 OTOL1A6NHN0 477 aaPredicted RBP5.36□□□□□ -1.55
R3HDM1-205ENST00000425804 RAC2P15153 192 aa5.36□□□□□ -1.55
R3HDM1-205ENST00000425804 DLG4P78352 724 aa5.36□□□□□ -1.55
R3HDM1-205ENST00000425804 KIF4BQ2VIQ3 1234 aa5.36□□□□□ -1.55
R3HDM1-205ENST00000425804 ERICH6BQ5W0A0 696 aa5.36□□□□□ -1.55
R3HDM1-205ENST00000425804 CCDC120Q96HB5 630 aa5.36□□□□□ -1.55
R3HDM1-205ENST00000425804 LIN7BQ9HAP6 207 aa5.36□□□□□ -1.55
R3HDM1-205ENST00000425804 SEMA3GQ9NS98 782 aa5.36□□□□□ -1.55
R3HDM1-205ENST00000425804 CNOT6Q9ULM6 557 aaKnown RBP5.36□□□□□ -1.55
R3HDM1-205ENST00000425804 OVOL3O00110 214 aa5.35□□□□□ -1.55
R3HDM1-205ENST00000425804 POLR3DP05423 398 aaPredicted RBP5.35□□□□□ -1.55
R3HDM1-205ENST00000425804 INSRRP14616 1297 aa5.35□□□□□ -1.55
R3HDM1-205ENST00000425804 PUM1Q14671 1186 aaKnown RBP eCLIP5.35□□□□□ -1.55
R3HDM1-205ENST00000425804 HSPA12BQ96MM6 686 aa5.35□□□□□ -1.55
R3HDM1-205ENST00000425804 ALPK1Q96QP1 1244 aa5.35□□□□□ -1.55
R3HDM1-205ENST00000425804 MCOLN1Q9GZU1 580 aa5.35□□□□□ -1.55
R3HDM1-205ENST00000425804 ZNF576Q9H609 170 aa5.35□□□□□ -1.55
R3HDM1-205ENST00000425804 ZMIZ1Q9ULJ6 1067 aa5.35□□□□□ -1.55
R3HDM1-205ENST00000425804 ADAMTS20P59510 1910 aa5.35□□□□□ -1.55
R3HDM1-205ENST00000425804 A0A1W2PP55 124 aa5.34□□□□□ -1.55
R3HDM1-205ENST00000425804 SASH1O94885 1247 aa5.34□□□□□ -1.55
R3HDM1-205ENST00000425804 TTC6Q86TZ1 520 aa5.34□□□□□ -1.55
R3HDM1-205ENST00000425804 CRELD1Q96HD1 420 aa5.34□□□□□ -1.55
R3HDM1-205ENST00000425804 PRDM10Q9NQV6 1147 aa5.34□□□□□ -1.55
R3HDM1-205ENST00000425804 AKAP8O43823 692 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-205ENST00000425804 ERVFC1P60507 584 aa5.33□□□□□ -1.56
R3HDM1-205ENST00000425804 SPATS1Q496A3 300 aa5.33□□□□□ -1.56
R3HDM1-205ENST00000425804 ZNF385BQ569K4 471 aa5.33□□□□□ -1.56
R3HDM1-205ENST00000425804 NOM1Q5C9Z4 860 aaKnown RBP5.33□□□□□ -1.56
R3HDM1-205ENST00000425804 CFAP70Q5T0N1 1121 aa5.33□□□□□ -1.56
R3HDM1-205ENST00000425804 FNBP4Q8N3X1 1017 aaPredicted RBP5.33□□□□□ -1.56
R3HDM1-205ENST00000425804 STK32AQ8WU08 396 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms