RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 POLR3DP05423 398 aaPredicted RBP12.25□□□□□ -0.45
MDC1-205ENST00000425072 YBX3P16989 372 aaKnown RBP eCLIP12.25□□□□□ -0.45
MDC1-205ENST00000425072 CFAP100Q494V2 611 aa12.25□□□□□ -0.45
MDC1-205ENST00000425072 BLOC1S2Q6QNY1 142 aa12.25□□□□□ -0.45
MDC1-205ENST00000425072 MFSD6Q6ZSS7 791 aa12.25□□□□□ -0.45
MDC1-205ENST00000425072 RUFY3Q7L099 469 aa12.25□□□□□ -0.45
MDC1-205ENST00000425072 GPC2Q8N158 579 aa12.25□□□□□ -0.45
MDC1-205ENST00000425072 SDR42E1Q8WUS8 393 aa12.25□□□□□ -0.45
MDC1-205ENST00000425072 SNX21Q969T3 373 aa12.25□□□□□ -0.45
MDC1-205ENST00000425072 JAKMIP1Q96N16 626 aaKnown RBP12.25□□□□□ -0.45
MDC1-205ENST00000425072 ZNF287Q9HBT7 754 aa12.25□□□□□ -0.45
MDC1-205ENST00000425072 TMOD2Q9NZR1 351 aa12.25□□□□□ -0.45
MDC1-205ENST00000425072 ARPP21Q9UBL0 812 aaPredicted RBP12.25□□□□□ -0.45
MDC1-205ENST00000425072 ANAPC4Q9UJX5 808 aa12.25□□□□□ -0.45
MDC1-205ENST00000425072 TAOK2Q9UL54 1235 aa12.25□□□□□ -0.45
MDC1-205ENST00000425072 PALD1Q9ULE6 856 aa12.25□□□□□ -0.45
MDC1-205ENST00000425072 ZBTB12Q9Y330 459 aaPredicted RBP12.25□□□□□ -0.45
MDC1-205ENST00000425072 GJA3Q9Y6H8 435 aa12.25□□□□□ -0.45
MDC1-205ENST00000425072 SBF1O95248 1867 aa12.25□□□□□ -0.45
MDC1-205ENST00000425072 DICER1Q9UPY3 1922 aaKnown RBP12.25□□□□□ -0.45
MDC1-205ENST00000425072 E7EWF7 191 aa12.24□□□□□ -0.45
MDC1-205ENST00000425072 FOXP2O15409 715 aa12.24□□□□□ -0.45
MDC1-205ENST00000425072 RHBDL3P58872 404 aa12.24□□□□□ -0.45
MDC1-205ENST00000425072 ANKRD1Q15327 319 aa12.24□□□□□ -0.45
MDC1-205ENST00000425072 AKNAD1Q5T1N1 836 aa12.24□□□□□ -0.45
MDC1-205ENST00000425072 CDC42EP5Q6NZY7 148 aa12.24□□□□□ -0.45
MDC1-205ENST00000425072 CTR9Q6PD62 1173 aa12.24□□□□□ -0.45
MDC1-205ENST00000425072 TTC6Q86TZ1 520 aa12.24□□□□□ -0.45
MDC1-205ENST00000425072 NCOA7Q8NI08 942 aa12.24□□□□□ -0.45
MDC1-205ENST00000425072 KRT23Q9C075 422 aa12.24□□□□□ -0.45
MDC1-205ENST00000425072 ALDH8A1Q9H2A2 487 aaPredicted RBP12.24□□□□□ -0.45
MDC1-205ENST00000425072 DHX36Q9H2U1 1008 aaKnown RBP12.24□□□□□ -0.45
MDC1-205ENST00000425072 MCM9Q9NXL9 1143 aa12.24□□□□□ -0.45
MDC1-205ENST00000425072 RNF181Q9P0P0 153 aa12.24□□□□□ -0.45
MDC1-205ENST00000425072 CNOT7Q9UIV1 285 aaKnown RBP12.24□□□□□ -0.45
MDC1-205ENST00000425072 MAST2Q6P0Q8 1798 aa12.23□□□□□ -0.45
MDC1-205ENST00000425072 CASTP20810 708 aaKnown RBP12.23□□□□□ -0.45
MDC1-205ENST00000425072 MCM5P33992 734 aa12.23□□□□□ -0.45
MDC1-205ENST00000425072 ZNF280AP59817 542 aaPredicted RBP12.23□□□□□ -0.45
MDC1-205ENST00000425072 PDE4BQ07343 736 aa12.23□□□□□ -0.45
MDC1-205ENST00000425072 PPARAQ07869 468 aa12.23□□□□□ -0.45
MDC1-205ENST00000425072 C12orf60Q5U649 245 aa12.23□□□□□ -0.45
MDC1-205ENST00000425072 FKBP1CQ5VVH2 108 aa12.23□□□□□ -0.45
MDC1-205ENST00000425072 C9orf131Q5VYM1 1079 aa12.23□□□□□ -0.45
MDC1-205ENST00000425072 DHX32Q7L7V1 743 aaKnown RBP12.23□□□□□ -0.45
MDC1-205ENST00000425072 RALYLQ86SE5 291 aaKnown RBP12.23□□□□□ -0.45
MDC1-205ENST00000425072 PRMT6Q96LA8 375 aaPredicted RBP12.23□□□□□ -0.45
MDC1-205ENST00000425072 IDI2Q9BXS1 227 aa12.23□□□□□ -0.45
MDC1-205ENST00000425072 MKRN1Q9UHC7 482 aaKnown RBP12.23□□□□□ -0.45
MDC1-205ENST00000425072 ZC3H4Q9UPT8 1303 aaKnown RBP12.22□□□□□ -0.45
MDC1-205ENST00000425072 SPDYE2BA6NHP3 402 aa12.22□□□□□ -0.45
MDC1-205ENST00000425072 ENTPD3O75355 529 aa12.22□□□□□ -0.45
MDC1-205ENST00000425072 SPDYE6P0CI01 402 aa12.22□□□□□ -0.45
MDC1-205ENST00000425072 GMPSP49915 693 aaPredicted RBP12.22□□□□□ -0.45
MDC1-205ENST00000425072 HAND2P61296 217 aa12.22□□□□□ -0.45
MDC1-205ENST00000425072 FGD1P98174 961 aa12.22□□□□□ -0.45
MDC1-205ENST00000425072 HSCBQ8IWL3 235 aa12.22□□□□□ -0.45
MDC1-205ENST00000425072 CHMP4CQ96CF2 233 aa12.22□□□□□ -0.45
MDC1-205ENST00000425072 IPO9Q96P70 1041 aaKnown RBP12.22□□□□□ -0.45
MDC1-205ENST00000425072 MTA3Q9BTC8 594 aa12.22□□□□□ -0.45
MDC1-205ENST00000425072 EPB41L4AQ9HCS5 686 aaPredicted RBP12.22□□□□□ -0.45
MDC1-205ENST00000425072 MYOZ2Q9NPC6 264 aa12.22□□□□□ -0.45
MDC1-205ENST00000425072 PDRG1Q9NUG6 133 aa12.22□□□□□ -0.45
MDC1-205ENST00000425072 RPS6KB1P23443 525 aa12.21□□□□□ -0.45
MDC1-205ENST00000425072 TNNI2P48788 182 aa12.21□□□□□ -0.45
MDC1-205ENST00000425072 ADCK5Q3MIX3 580 aa12.21□□□□□ -0.45
MDC1-205ENST00000425072 FOXP4Q8IVH2 680 aaPredicted RBP12.21□□□□□ -0.45
MDC1-205ENST00000425072 MAPKAPK5Q8IW41 473 aa12.21□□□□□ -0.45
MDC1-205ENST00000425072 STAG1Q8WVM7 1258 aa12.21□□□□□ -0.45
MDC1-205ENST00000425072 TDRD3Q9H7E2 651 aaKnown RBP12.21□□□□□ -0.45
MDC1-205ENST00000425072 WDR19Q8NEZ3 1342 aa12.2□□□□□ -0.46
MDC1-205ENST00000425072 WDHD1O75717 1129 aaPredicted RBP12.2□□□□□ -0.46
MDC1-205ENST00000425072 HLA-DOAP06340 250 aa12.2□□□□□ -0.46
MDC1-205ENST00000425072 FGRP09769 529 aa12.2□□□□□ -0.46
MDC1-205ENST00000425072 LMOD1P29536 600 aaPredicted RBP12.2□□□□□ -0.46
MDC1-205ENST00000425072 EXOSC10Q01780 885 aaKnown RBP12.2□□□□□ -0.46
MDC1-205ENST00000425072 CTDSPL2Q05D32 466 aa12.2□□□□□ -0.46
MDC1-205ENST00000425072 CCDC178Q5BJE1 867 aa12.2□□□□□ -0.46
MDC1-205ENST00000425072 MICALL2Q8IY33 904 aa12.2□□□□□ -0.46
MDC1-205ENST00000425072 ZNF444Q8N0Y2 327 aaPredicted RBP12.2□□□□□ -0.46
MDC1-205ENST00000425072 TMTC2Q8N394 836 aa12.2□□□□□ -0.46
MDC1-205ENST00000425072 FBXL16Q8N461 479 aa12.2□□□□□ -0.46
MDC1-205ENST00000425072 ESR2Q92731 530 aa12.2□□□□□ -0.46
MDC1-205ENST00000425072 ZSCAN31Q96LW9 406 aaPredicted RBP12.2□□□□□ -0.46
MDC1-205ENST00000425072 UPF3BQ9BZI7 483 aaKnown RBP12.2□□□□□ -0.46
MDC1-205ENST00000425072 MKNK2Q9HBH9 465 aa12.2□□□□□ -0.46
MDC1-205ENST00000425072 TOMM22Q9NS69 142 aa12.2□□□□□ -0.46
MDC1-205ENST00000425072 PI4KBQ9UBF8 816 aa12.2□□□□□ -0.46
MDC1-205ENST00000425072 ZNF70Q9UC06 446 aaPredicted RBP12.2□□□□□ -0.46
MDC1-205ENST00000425072 PCNTO95613 3336 aa12.2□□□□□ -0.46
MDC1-205ENST00000425072 COL4A5P29400 1685 aa12.19□□□□□ -0.46
MDC1-205ENST00000425072 FLT1P17948 1338 aa12.19□□□□□ -0.46
MDC1-205ENST00000425072 PICALMQ13492 652 aa12.19□□□□□ -0.46
MDC1-205ENST00000425072 TNFAIP1Q13829 316 aa12.19□□□□□ -0.46
MDC1-205ENST00000425072 SART3Q15020 963 aaKnown RBP12.19□□□□□ -0.46
MDC1-205ENST00000425072 RBM26Q5T8P6 1007 aaKnown RBP12.19□□□□□ -0.46
MDC1-205ENST00000425072 FAM83AQ86UY5 434 aa12.19□□□□□ -0.46
MDC1-205ENST00000425072 FAM151AQ8WW52 585 aa12.19□□□□□ -0.46
MDC1-205ENST00000425072 ZBED3Q96IU2 234 aaPredicted RBP12.19□□□□□ -0.46
MDC1-205ENST00000425072 TMEM87BQ96K49 555 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms