RNA–Protein interactions for RNA: ENST00000423998.1

GTF3C2-204, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 828 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-204ENST00000423998 CSADQ9Y600 493 aa16.6■□□□□ 0.25
GTF3C2-204ENST00000423998 ECM29Q5VYK3 1845 aa16.6■□□□□ 0.25
GTF3C2-204ENST00000423998 SALL3Q9BXA9 1300 aa16.6■□□□□ 0.25
GTF3C2-204ENST00000423998 MYH2Q9UKX2 1941 aa16.6■□□□□ 0.25
GTF3C2-204ENST00000423998 TBC1D12O60347 775 aa16.59■□□□□ 0.25
GTF3C2-204ENST00000423998 ZNF157P51786 506 aaPredicted RBP16.59■□□□□ 0.25
GTF3C2-204ENST00000423998 CACNB3P54284 484 aa16.59■□□□□ 0.25
GTF3C2-204ENST00000423998 NOGQ13253 232 aa16.59■□□□□ 0.25
GTF3C2-204ENST00000423998 MIGA1Q8NAN2 632 aa16.59■□□□□ 0.25
GTF3C2-204ENST00000423998 SH3RF3Q8TEJ3 882 aaPredicted RBP16.59■□□□□ 0.25
GTF3C2-204ENST00000423998 ZNF384Q8TF68 577 aa16.59■□□□□ 0.25
GTF3C2-204ENST00000423998 TGFBRAP1Q8WUH2 860 aa16.59■□□□□ 0.25
GTF3C2-204ENST00000423998 KLRG1Q96E93 195 aa16.59■□□□□ 0.25
GTF3C2-204ENST00000423998 NACAP1Q9BZK3 213 aa16.59■□□□□ 0.25
GTF3C2-204ENST00000423998 OSBPL5Q9H0X9 879 aaPredicted RBP16.59■□□□□ 0.25
GTF3C2-204ENST00000423998 FAM198AQ9UFP1 575 aa16.59■□□□□ 0.25
GTF3C2-204ENST00000423998 POLR2AP24928 1970 aaKnown RBP16.58■□□□□ 0.25
GTF3C2-204ENST00000423998 MAP3K9P80192 1104 aa16.58■□□□□ 0.24
GTF3C2-204ENST00000423998 NFIAQ12857 509 aa16.58■□□□□ 0.24
GTF3C2-204ENST00000423998 PRAMEF18Q5VWM3 479 aa16.58■□□□□ 0.24
GTF3C2-204ENST00000423998 RILPL2Q969X0 211 aa16.58■□□□□ 0.24
GTF3C2-204ENST00000423998 TEPSINQ96N21 525 aa16.58■□□□□ 0.24
GTF3C2-204ENST00000423998 COL2A1P02458 1487 aaPredicted RBP16.58■□□□□ 0.24
GTF3C2-204ENST00000423998 TRPM7Q96QT4 1865 aa16.58■□□□□ 0.24
GTF3C2-204ENST00000423998 CNTNAP1P78357 1384 aa16.57■□□□□ 0.24
GTF3C2-204ENST00000423998 RFX7Q2KHR2 1363 aa16.57■□□□□ 0.24
GTF3C2-204ENST00000423998 TCRBV5S4A2TA0A5A2 114 aa16.57■□□□□ 0.24
GTF3C2-204ENST00000423998 INHBEP58166 350 aa16.57■□□□□ 0.24
GTF3C2-204ENST00000423998 TSHZ3Q63HK5 1081 aa16.57■□□□□ 0.24
GTF3C2-204ENST00000423998 GIMAP6Q6P9H5 292 aa16.57■□□□□ 0.24
GTF3C2-204ENST00000423998 CRACR2BQ8N4Y2 399 aaPredicted RBP16.57■□□□□ 0.24
GTF3C2-204ENST00000423998 OTUD7AQ8TE49 926 aaPredicted RBP16.57■□□□□ 0.24
GTF3C2-204ENST00000423998 EDC3Q96F86 508 aaKnown RBP16.57■□□□□ 0.24
GTF3C2-204ENST00000423998 BEGAINQ9BUH8 593 aa16.57■□□□□ 0.24
GTF3C2-204ENST00000423998 HELLSQ9NRZ9 838 aa16.57■□□□□ 0.24
GTF3C2-204ENST00000423998 GINM1Q9NU53 330 aa16.57■□□□□ 0.24
GTF3C2-204ENST00000423998 ATRNL1Q5VV63 1379 aa16.56■□□□□ 0.24
GTF3C2-204ENST00000423998 POLR3DP05423 398 aaPredicted RBP16.56■□□□□ 0.24
GTF3C2-204ENST00000423998 MAP2K1Q02750 393 aaPredicted RBP16.56■□□□□ 0.24
GTF3C2-204ENST00000423998 LDLRAD1Q5T700 205 aa16.56■□□□□ 0.24
GTF3C2-204ENST00000423998 RIOK1Q9BRS2 568 aaKnown RBP16.56■□□□□ 0.24
GTF3C2-204ENST00000423998 ZNF287Q9HBT7 754 aa16.56■□□□□ 0.24
GTF3C2-204ENST00000423998 SCAF8Q9UPN6 1271 aaKnown RBP16.56■□□□□ 0.24
GTF3C2-204ENST00000423998 FLT1P17948 1338 aa16.55■□□□□ 0.24
GTF3C2-204ENST00000423998 WDR33Q9C0J8 1336 aaKnown RBP16.55■□□□□ 0.24
GTF3C2-204ENST00000423998 UBE2Q2LH0YL09 131 aa16.55■□□□□ 0.24
GTF3C2-204ENST00000423998 USP2O75604 605 aaPredicted RBP16.55■□□□□ 0.24
GTF3C2-204ENST00000423998 MBD4O95243 580 aa16.55■□□□□ 0.24
GTF3C2-204ENST00000423998 ZBTB48P10074 688 aaPredicted RBP16.55■□□□□ 0.24
GTF3C2-204ENST00000423998 MAP3K10Q02779 954 aa16.55■□□□□ 0.24
GTF3C2-204ENST00000423998 FMR1Q06787 632 aaKnown RBP eCLIP16.55■□□□□ 0.24
GTF3C2-204ENST00000423998 PRKG1Q13976 671 aa16.55■□□□□ 0.24
GTF3C2-204ENST00000423998 ADGRA1Q86SQ6 560 aa16.55■□□□□ 0.24
GTF3C2-204ENST00000423998 RUFY2Q8WXA3 655 aa16.55■□□□□ 0.24
GTF3C2-204ENST00000423998 CAPNS2Q96L46 248 aa16.55■□□□□ 0.24
GTF3C2-204ENST00000423998 TBC1D2Q9BYX2 928 aa16.55■□□□□ 0.24
GTF3C2-204ENST00000423998 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.55■□□□□ 0.24
GTF3C2-204ENST00000423998 MKRN1Q9UHC7 482 aaKnown RBP16.55■□□□□ 0.24
GTF3C2-204ENST00000423998 MAST2Q6P0Q8 1798 aa16.55■□□□□ 0.24
GTF3C2-204ENST00000423998 PAPPA2Q9BXP8 1791 aa16.55■□□□□ 0.24
GTF3C2-204ENST00000423998 CTNND1O60716 968 aaKnown RBP16.54■□□□□ 0.24
GTF3C2-204ENST00000423998 APPP05067 770 aa16.54■□□□□ 0.24
GTF3C2-204ENST00000423998 DYNLL1P63167 89 aaKnown RBP16.54■□□□□ 0.24
GTF3C2-204ENST00000423998 MAPKAPK5Q8IW41 473 aa16.54■□□□□ 0.24
GTF3C2-204ENST00000423998 DNAJC5GQ8N7S2 189 aa16.54■□□□□ 0.24
GTF3C2-204ENST00000423998 WRNIP1Q96S55 665 aa16.54■□□□□ 0.24
GTF3C2-204ENST00000423998 PICK1Q9NRD5 415 aa16.54■□□□□ 0.24
GTF3C2-204ENST00000423998 DIAPH3Q9NSV4 1193 aa16.54■□□□□ 0.24
GTF3C2-204ENST00000423998 SLC4A4Q9Y6R1 1079 aa16.54■□□□□ 0.24
GTF3C2-204ENST00000423998 PATL2C9JE40 543 aaKnown RBP16.53■□□□□ 0.24
GTF3C2-204ENST00000423998 SLC3A2P08195 630 aaKnown RBP16.53■□□□□ 0.24
GTF3C2-204ENST00000423998 SREBF2Q12772 1141 aa16.53■□□□□ 0.24
GTF3C2-204ENST00000423998 MCMDC2Q4G0Z9 681 aa16.53■□□□□ 0.24
GTF3C2-204ENST00000423998 OTUD7BQ6GQQ9 843 aa16.53■□□□□ 0.24
GTF3C2-204ENST00000423998 EHD4Q9H223 541 aa16.53■□□□□ 0.24
GTF3C2-204ENST00000423998 MCM9Q9NXL9 1143 aa16.53■□□□□ 0.24
GTF3C2-204ENST00000423998 SERPINB13Q9UIV8 391 aa16.53■□□□□ 0.24
GTF3C2-204ENST00000423998 ZNF112Q9UJU3 913 aa16.53■□□□□ 0.24
GTF3C2-204ENST00000423998 CA12O43570 354 aa16.52■□□□□ 0.24
GTF3C2-204ENST00000423998 VEGFBP49765 207 aa16.52■□□□□ 0.24
GTF3C2-204ENST00000423998 ZMYM1Q5SVZ6 1142 aa16.52■□□□□ 0.24
GTF3C2-204ENST00000423998 TTC22Q5TAA0 569 aa16.52■□□□□ 0.24
GTF3C2-204ENST00000423998 CASC1Q6TDU7 716 aa16.52■□□□□ 0.24
GTF3C2-204ENST00000423998 DLK2Q6UY11 383 aa16.52■□□□□ 0.24
GTF3C2-204ENST00000423998 MIGA2Q7L4E1 593 aa16.52■□□□□ 0.24
GTF3C2-204ENST00000423998 ERO1BQ86YB8 467 aa16.52■□□□□ 0.24
GTF3C2-204ENST00000423998 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.52■□□□□ 0.24
GTF3C2-204ENST00000423998 STRBPQ96SI9 672 aaKnown RBP16.52■□□□□ 0.24
GTF3C2-204ENST00000423998 PUS7LQ9H0K6 701 aaKnown RBP16.52■□□□□ 0.24
GTF3C2-204ENST00000423998 ARMT1Q9H993 441 aa16.52■□□□□ 0.24
GTF3C2-204ENST00000423998 DDX4Q9NQI0 724 aaKnown RBP16.52■□□□□ 0.24
GTF3C2-204ENST00000423998 ARPP21Q9UBL0 812 aaPredicted RBP16.52■□□□□ 0.24
GTF3C2-204ENST00000423998 SWAP70Q9UH65 585 aa16.52■□□□□ 0.24
GTF3C2-204ENST00000423998 DDTLA6NHG4 134 aaPredicted RBP16.51■□□□□ 0.23
GTF3C2-204ENST00000423998 MANSC4A6NHS7 340 aaPredicted RBP16.51■□□□□ 0.23
GTF3C2-204ENST00000423998 GPAA1O43292 621 aa16.51■□□□□ 0.23
GTF3C2-204ENST00000423998 SLC10A3P09131 477 aa16.51■□□□□ 0.23
GTF3C2-204ENST00000423998 SDSP20132 328 aa16.51■□□□□ 0.23
GTF3C2-204ENST00000423998 GRM1Q13255 1194 aa16.51■□□□□ 0.23
GTF3C2-204ENST00000423998 CYP4F22Q6NT55 531 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms