RNA–Protein interactions for RNA: ENST00000423311.1

LINC01399-201, Transcript of long intergenic non-protein coding RNA 1399, humanhuman

TSL 3 BASIC

Gene LINC01399, Length 648 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01399-201ENST00000423311 TTC14Q96N46 770 aa10.79□□□□□ -0.68
LINC01399-201ENST00000423311 RNF41Q9H4P4 317 aaPredicted RBP10.79□□□□□ -0.68
LINC01399-201ENST00000423311 DAXXQ9UER7 740 aaPredicted RBP10.79□□□□□ -0.68
LINC01399-201ENST00000423311 TAOK2Q9UL54 1235 aa10.79□□□□□ -0.68
LINC01399-201ENST00000423311 MYH8P13535 1937 aa10.79□□□□□ -0.68
LINC01399-201ENST00000423311 SLC3A2P08195 630 aaKnown RBP10.78□□□□□ -0.68
LINC01399-201ENST00000423311 FGRP09769 529 aa10.78□□□□□ -0.68
LINC01399-201ENST00000423311 YBX3P16989 372 aaKnown RBP eCLIP10.78□□□□□ -0.68
LINC01399-201ENST00000423311 PRELPP51888 382 aa10.78□□□□□ -0.68
LINC01399-201ENST00000423311 PPARAQ07869 468 aa10.78□□□□□ -0.68
LINC01399-201ENST00000423311 ANKRD1Q15327 319 aa10.78□□□□□ -0.68
LINC01399-201ENST00000423311 AKNAD1Q5T1N1 836 aa10.78□□□□□ -0.68
LINC01399-201ENST00000423311 MFSD6Q6ZSS7 791 aa10.78□□□□□ -0.68
LINC01399-201ENST00000423311 DHX32Q7L7V1 743 aaKnown RBP10.78□□□□□ -0.68
LINC01399-201ENST00000423311 TGFBRAP1Q8WUH2 860 aa10.78□□□□□ -0.68
LINC01399-201ENST00000423311 IDI2Q9BXS1 227 aa10.78□□□□□ -0.68
LINC01399-201ENST00000423311 TBC1D2Q9BYX2 928 aa10.78□□□□□ -0.68
LINC01399-201ENST00000423311 UPF3BQ9BZI7 483 aaKnown RBP10.78□□□□□ -0.68
LINC01399-201ENST00000423311 KRT23Q9C075 422 aa10.78□□□□□ -0.68
LINC01399-201ENST00000423311 NBPF3Q9H094 633 aa10.78□□□□□ -0.68
LINC01399-201ENST00000423311 TAF6LQ9Y6J9 622 aa10.78□□□□□ -0.68
LINC01399-201ENST00000423311 ROBO3Q96MS0 1386 aa10.77□□□□□ -0.68
LINC01399-201ENST00000423311 COL2A1P02458 1487 aaPredicted RBP10.77□□□□□ -0.69
LINC01399-201ENST00000423311 USP17L12C9JPN9 530 aa10.77□□□□□ -0.69
LINC01399-201ENST00000423311 USP17L21D6R901 530 aa10.77□□□□□ -0.69
LINC01399-201ENST00000423311 K7ELQ4 463 aaPredicted RBP10.77□□□□□ -0.69
LINC01399-201ENST00000423311 GRIN3BO60391 1043 aa10.77□□□□□ -0.69
LINC01399-201ENST00000423311 WDHD1O75717 1129 aaPredicted RBP10.77□□□□□ -0.69
LINC01399-201ENST00000423311 RBM5P52756 815 aaKnown RBP eCLIP10.77□□□□□ -0.69
LINC01399-201ENST00000423311 ZNF280AP59817 542 aaPredicted RBP10.77□□□□□ -0.69
LINC01399-201ENST00000423311 HAND2P61296 217 aa10.77□□□□□ -0.69
LINC01399-201ENST00000423311 EXOSC10Q01780 885 aaKnown RBP10.77□□□□□ -0.69
LINC01399-201ENST00000423311 CFAP100Q494V2 611 aa10.77□□□□□ -0.69
LINC01399-201ENST00000423311 C12orf60Q5U649 245 aa10.77□□□□□ -0.69
LINC01399-201ENST00000423311 CDC42EP5Q6NZY7 148 aa10.77□□□□□ -0.69
LINC01399-201ENST00000423311 STOX1Q6ZVD7 989 aa10.77□□□□□ -0.69
LINC01399-201ENST00000423311 RALYLQ86SE5 291 aaKnown RBP10.77□□□□□ -0.69
LINC01399-201ENST00000423311 GPC2Q8N158 579 aa10.77□□□□□ -0.69
LINC01399-201ENST00000423311 MTA3Q9BTC8 594 aa10.77□□□□□ -0.69
LINC01399-201ENST00000423311 PDRG1Q9NUG6 133 aa10.77□□□□□ -0.69
LINC01399-201ENST00000423311 USP40Q9NVE5 1235 aa10.77□□□□□ -0.69
LINC01399-201ENST00000423311 MCM9Q9NXL9 1143 aa10.77□□□□□ -0.69
LINC01399-201ENST00000423311 FLT1P17948 1338 aa10.77□□□□□ -0.69
LINC01399-201ENST00000423311 SPDYE2BA6NHP3 402 aa10.76□□□□□ -0.69
LINC01399-201ENST00000423311 CD2BP2O95400 341 aaKnown RBP10.76□□□□□ -0.69
LINC01399-201ENST00000423311 SPDYE6P0CI01 402 aa10.76□□□□□ -0.69
LINC01399-201ENST00000423311 MCM5P33992 734 aa10.76□□□□□ -0.69
LINC01399-201ENST00000423311 CTDSPL2Q05D32 466 aa10.76□□□□□ -0.69
LINC01399-201ENST00000423311 PDE4BQ07343 736 aa10.76□□□□□ -0.69
LINC01399-201ENST00000423311 DLGAP5Q15398 846 aa10.76□□□□□ -0.69
LINC01399-201ENST00000423311 FKBP1CQ5VVH2 108 aa10.76□□□□□ -0.69
LINC01399-201ENST00000423311 TBC1D10CQ8IV04 446 aa10.76□□□□□ -0.69
LINC01399-201ENST00000423311 AGXT2Q9BYV1 514 aa10.76□□□□□ -0.69
LINC01399-201ENST00000423311 ZNF287Q9HBT7 754 aa10.76□□□□□ -0.69
LINC01399-201ENST00000423311 ZBTB12Q9Y330 459 aaPredicted RBP10.76□□□□□ -0.69
LINC01399-201ENST00000423311 ZC3H4Q9UPT8 1303 aaKnown RBP10.76□□□□□ -0.69
LINC01399-201ENST00000423311 MINDY4BA8MYZ0 360 aa10.75□□□□□ -0.69
LINC01399-201ENST00000423311 ORC4O43929 436 aa10.75□□□□□ -0.69
LINC01399-201ENST00000423311 ENTPD3O75355 529 aa10.75□□□□□ -0.69
LINC01399-201ENST00000423311 POLR3DP05423 398 aaPredicted RBP10.75□□□□□ -0.69
LINC01399-201ENST00000423311 AK2P54819 239 aa10.75□□□□□ -0.69
LINC01399-201ENST00000423311 GPR162Q16538 588 aa10.75□□□□□ -0.69
LINC01399-201ENST00000423311 TTC6Q86TZ1 520 aa10.75□□□□□ -0.69
LINC01399-201ENST00000423311 MAPKAPK5Q8IW41 473 aa10.75□□□□□ -0.69
LINC01399-201ENST00000423311 MB21D2Q8IYB1 491 aaPredicted RBP10.75□□□□□ -0.69
LINC01399-201ENST00000423311 ZBED3Q96IU2 234 aaPredicted RBP10.75□□□□□ -0.69
LINC01399-201ENST00000423311 PRMT6Q96LA8 375 aaPredicted RBP10.75□□□□□ -0.69
LINC01399-201ENST00000423311 ZSCAN31Q96LW9 406 aaPredicted RBP10.75□□□□□ -0.69
LINC01399-201ENST00000423311 DHX36Q9H2U1 1008 aaKnown RBP10.75□□□□□ -0.69
LINC01399-201ENST00000423311 TMOD2Q9NZR1 351 aa10.75□□□□□ -0.69
LINC01399-201ENST00000423311 LIMCH1Q9UPQ0 1083 aa10.75□□□□□ -0.69
LINC01399-201ENST00000423311 UTRNP46939 3433 aa10.74□□□□□ -0.69
LINC01399-201ENST00000423311 MYO1BO43795 1136 aa10.74□□□□□ -0.69
LINC01399-201ENST00000423311 CPA1P15085 419 aa10.74□□□□□ -0.69
LINC01399-201ENST00000423311 GMPSP49915 693 aaPredicted RBP10.74□□□□□ -0.69
LINC01399-201ENST00000423311 ESR2Q92731 530 aa10.74□□□□□ -0.69
LINC01399-201ENST00000423311 TMEM87BQ96K49 555 aa10.74□□□□□ -0.69
LINC01399-201ENST00000423311 OSBPL5Q9H0X9 879 aaPredicted RBP10.74□□□□□ -0.69
LINC01399-201ENST00000423311 EHD4Q9H223 541 aa10.74□□□□□ -0.69
LINC01399-201ENST00000423311 MYOZ2Q9NPC6 264 aa10.74□□□□□ -0.69
LINC01399-201ENST00000423311 SH2B1Q9NRF2 756 aaPredicted RBP10.74□□□□□ -0.69
LINC01399-201ENST00000423311 RNF181Q9P0P0 153 aa10.74□□□□□ -0.69
LINC01399-201ENST00000423311 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.74□□□□□ -0.69
LINC01399-201ENST00000423311 NEDD4P46934 1319 aa10.74□□□□□ -0.69
LINC01399-201ENST00000423311 ZNF541Q9H0D2 1346 aa10.74□□□□□ -0.69
LINC01399-201ENST00000423311 SIPA1L1O43166 1804 aa10.74□□□□□ -0.69
LINC01399-201ENST00000423311 ATRNL1Q5VV63 1379 aa10.74□□□□□ -0.69
LINC01399-201ENST00000423311 H7C1D1 291 aa10.73□□□□□ -0.69
LINC01399-201ENST00000423311 PRC1O43663 620 aa10.73□□□□□ -0.69
LINC01399-201ENST00000423311 EVCP57679 992 aa10.73□□□□□ -0.69
LINC01399-201ENST00000423311 FGD1P98174 961 aa10.73□□□□□ -0.69
LINC01399-201ENST00000423311 TOB2Q14106 344 aaPredicted RBP10.73□□□□□ -0.69
LINC01399-201ENST00000423311 SART3Q15020 963 aaKnown RBP10.73□□□□□ -0.69
LINC01399-201ENST00000423311 SPDYE2Q495Y8 402 aa10.73□□□□□ -0.69
LINC01399-201ENST00000423311 Q6ZUG5 572 aa10.73□□□□□ -0.69
LINC01399-201ENST00000423311 C16orf86Q6ZW13 317 aa10.73□□□□□ -0.69
LINC01399-201ENST00000423311 TDRD3Q9H7E2 651 aaKnown RBP10.73□□□□□ -0.69
LINC01399-201ENST00000423311 DDX4Q9NQI0 724 aaKnown RBP10.73□□□□□ -0.69
LINC01399-201ENST00000423311 CNOT7Q9UIV1 285 aaKnown RBP10.73□□□□□ -0.69
LINC01399-201ENST00000423311 GJA3Q9Y6H8 435 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms