RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 CACNA1BQ00975 2339 aa7.27□□□□□ -1.25
HDAC8-212ENST00000421523 ADGRE1Q14246 886 aa7.26□□□□□ -1.25
HDAC8-212ENST00000421523 SKIV2LQ15477 1246 aaKnown RBP7.26□□□□□ -1.25
HDAC8-212ENST00000421523 GADL1Q6ZQY3 521 aa7.26□□□□□ -1.25
HDAC8-212ENST00000421523 MIGA2Q7L4E1 593 aa7.26□□□□□ -1.25
HDAC8-212ENST00000421523 PLBD2Q8NHP8 589 aa7.26□□□□□ -1.25
HDAC8-212ENST00000421523 TSPYL2Q9H2G4 693 aaPredicted RBP7.26□□□□□ -1.25
HDAC8-212ENST00000421523 PRKRIP1Q9H875 184 aaPredicted RBP7.26□□□□□ -1.25
HDAC8-212ENST00000421523 MYO15AQ9UKN7 3530 aa7.26□□□□□ -1.25
HDAC8-212ENST00000421523 BAHCC1Q9P281 2608 aa7.26□□□□□ -1.25
HDAC8-212ENST00000421523 LRRC37A2A6NM11 1700 aa7.25□□□□□ -1.25
HDAC8-212ENST00000421523 PDE8AO60658 829 aa7.25□□□□□ -1.25
HDAC8-212ENST00000421523 CCND3P30281 292 aaPredicted RBP7.25□□□□□ -1.25
HDAC8-212ENST00000421523 EPHB4P54760 987 aa7.25□□□□□ -1.25
HDAC8-212ENST00000421523 FOXK2Q01167 660 aa7.25□□□□□ -1.25
HDAC8-212ENST00000421523 TRIM28Q13263 835 aaKnown RBP7.25□□□□□ -1.25
HDAC8-212ENST00000421523 POLA2Q14181 598 aa7.25□□□□□ -1.25
HDAC8-212ENST00000421523 NEUROD2Q15784 382 aa7.25□□□□□ -1.25
HDAC8-212ENST00000421523 AAK1Q2M2I8 961 aa7.25□□□□□ -1.25
HDAC8-212ENST00000421523 DZIP1LQ8IYY4 767 aaKnown RBP7.25□□□□□ -1.25
HDAC8-212ENST00000421523 FBXL18Q96ME1 805 aa7.25□□□□□ -1.25
HDAC8-212ENST00000421523 PHOX2BQ99453 314 aa7.25□□□□□ -1.25
HDAC8-212ENST00000421523 MBIPQ9NS73 344 aa7.25□□□□□ -1.25
HDAC8-212ENST00000421523 BSDC1Q9NW68 430 aaPredicted RBP7.25□□□□□ -1.25
HDAC8-212ENST00000421523 CHPF2Q9P2E5 772 aa7.25□□□□□ -1.25
HDAC8-212ENST00000421523 LEMD3Q9Y2U8 911 aa7.25□□□□□ -1.25
HDAC8-212ENST00000421523 ZFHX2Q9C0A1 2572 aaPredicted RBP7.25□□□□□ -1.25
HDAC8-212ENST00000421523 EPG5Q9HCE0 2579 aa7.25□□□□□ -1.25
HDAC8-212ENST00000421523 CFAP47Q6ZTR5 3102 aa7.25□□□□□ -1.25
HDAC8-212ENST00000421523 FRMPD3Q5JV73 1810 aa7.24□□□□□ -1.25
HDAC8-212ENST00000421523 PRR33A8MZF0 331 aa7.24□□□□□ -1.25
HDAC8-212ENST00000421523 SNAP23O00161 211 aa7.24□□□□□ -1.25
HDAC8-212ENST00000421523 HSP90B1P14625 803 aaKnown RBP7.24□□□□□ -1.25
HDAC8-212ENST00000421523 CYP2B6P20813 491 aa7.24□□□□□ -1.25
HDAC8-212ENST00000421523 PBX2P40425 430 aa7.24□□□□□ -1.25
HDAC8-212ENST00000421523 MAP3K21Q5TCX8 1036 aa7.24□□□□□ -1.25
HDAC8-212ENST00000421523 DUSP27Q5VZP5 1158 aa7.24□□□□□ -1.25
HDAC8-212ENST00000421523 DCAF15Q66K64 600 aa7.24□□□□□ -1.25
HDAC8-212ENST00000421523 LHX8Q68G74 356 aa7.24□□□□□ -1.25
HDAC8-212ENST00000421523 CCDC129Q6ZRS4 1044 aa7.24□□□□□ -1.25
HDAC8-212ENST00000421523 ZNF341Q9BYN7 854 aa7.24□□□□□ -1.25
HDAC8-212ENST00000421523 GREM2Q9H772 168 aa7.24□□□□□ -1.25
HDAC8-212ENST00000421523 DBF4Q9UBU7 674 aaPredicted RBP7.24□□□□□ -1.25
HDAC8-212ENST00000421523 TTF2Q9UNY4 1162 aaKnown RBP7.24□□□□□ -1.25
HDAC8-212ENST00000421523 PKD1L2Q7Z442 2459 aa7.24□□□□□ -1.25
HDAC8-212ENST00000421523 ST18O60284 1047 aa7.23□□□□□ -1.25
HDAC8-212ENST00000421523 CTSWP56202 376 aa7.23□□□□□ -1.25
HDAC8-212ENST00000421523 CACNB2Q08289 660 aaPredicted RBP7.23□□□□□ -1.25
HDAC8-212ENST00000421523 HDGFL1Q5TGJ6 251 aa7.23□□□□□ -1.25
HDAC8-212ENST00000421523 SH3RF1Q7Z6J0 888 aa7.23□□□□□ -1.25
HDAC8-212ENST00000421523 PDLIM7Q9NR12 457 aa7.23□□□□□ -1.25
HDAC8-212ENST00000421523 SERPINA10Q9UK55 444 aa7.23□□□□□ -1.25
HDAC8-212ENST00000421523 VPS13AQ96RL7 3174 aa7.23□□□□□ -1.25
HDAC8-212ENST00000421523 PLXNA1Q9UIW2 1896 aa7.22□□□□□ -1.25
HDAC8-212ENST00000421523 A0A0G2JLL6 359 aaPredicted RBP7.22□□□□□ -1.25
HDAC8-212ENST00000421523 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.22□□□□□ -1.25
HDAC8-212ENST00000421523 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.22□□□□□ -1.25
HDAC8-212ENST00000421523 TRIM43BA6NCK2 446 aa7.22□□□□□ -1.25
HDAC8-212ENST00000421523 GRXCR1A8MXD5 290 aa7.22□□□□□ -1.25
HDAC8-212ENST00000421523 APAF1O14727 1248 aa7.22□□□□□ -1.25
HDAC8-212ENST00000421523 ZKSCAN1P17029 563 aaPredicted RBP7.22□□□□□ -1.25
HDAC8-212ENST00000421523 CRKP46108 304 aa7.22□□□□□ -1.25
HDAC8-212ENST00000421523 WDR43Q15061 677 aaKnown RBP eCLIP7.22□□□□□ -1.25
HDAC8-212ENST00000421523 CSPP1Q1MSJ5 1256 aa7.22□□□□□ -1.25
HDAC8-212ENST00000421523 FAM110CQ1W6H9 321 aa7.22□□□□□ -1.25
HDAC8-212ENST00000421523 TRIM60Q495X7 471 aa7.22□□□□□ -1.25
HDAC8-212ENST00000421523 MFSD14BQ5SR56 506 aa7.22□□□□□ -1.25
HDAC8-212ENST00000421523 FASTKD5Q7L8L6 764 aaKnown RBP7.22□□□□□ -1.25
HDAC8-212ENST00000421523 ZNF804AQ7Z570 1209 aa7.22□□□□□ -1.25
HDAC8-212ENST00000421523 PRRT2Q7Z6L0 340 aaPredicted RBP7.22□□□□□ -1.25
HDAC8-212ENST00000421523 TRIM43Q96BQ3 446 aaPredicted RBP7.22□□□□□ -1.25
HDAC8-212ENST00000421523 HOOK2Q96ED9 719 aa7.22□□□□□ -1.25
HDAC8-212ENST00000421523 PBX4Q9BYU1 374 aa7.22□□□□□ -1.25
HDAC8-212ENST00000421523 PHAXQ9H814 394 aaKnown RBP7.22□□□□□ -1.25
HDAC8-212ENST00000421523 IFT57Q9NWB7 429 aa7.22□□□□□ -1.25
HDAC8-212ENST00000421523 HYPKQ9NX55 129 aa7.22□□□□□ -1.25
HDAC8-212ENST00000421523 GJD2Q9UKL4 321 aa7.22□□□□□ -1.25
HDAC8-212ENST00000421523 LAS1LQ9Y4W2 734 aaKnown RBP7.22□□□□□ -1.25
HDAC8-212ENST00000421523 DMDP11532 3685 aa7.22□□□□□ -1.25
HDAC8-212ENST00000421523 PLXNB2O15031 1838 aa7.22□□□□□ -1.25
HDAC8-212ENST00000421523 PI4K2BG5E9Z4 385 aa7.21□□□□□ -1.26
HDAC8-212ENST00000421523 CXCL11O14625 94 aa7.21□□□□□ -1.26
HDAC8-212ENST00000421523 KRT37O76014 449 aa7.21□□□□□ -1.26
HDAC8-212ENST00000421523 MYCNP04198 464 aaPredicted RBP7.21□□□□□ -1.26
HDAC8-212ENST00000421523 ITGB8P26012 769 aa7.21□□□□□ -1.26
HDAC8-212ENST00000421523 IGHMBP2P38935 993 aaKnown RBP7.21□□□□□ -1.26
HDAC8-212ENST00000421523 FKBP1AP62942 108 aaKnown RBP7.21□□□□□ -1.26
HDAC8-212ENST00000421523 CCDC184Q52MB2 194 aa7.21□□□□□ -1.26
HDAC8-212ENST00000421523 C8orf58Q8NAV2 365 aa7.21□□□□□ -1.26
HDAC8-212ENST00000421523 MYD88Q99836 296 aa7.21□□□□□ -1.26
HDAC8-212ENST00000421523 ANKRD2Q9GZV1 360 aa7.21□□□□□ -1.26
HDAC8-212ENST00000421523 TMOD2Q9NZR1 351 aa7.21□□□□□ -1.26
HDAC8-212ENST00000421523 ZHX2Q9Y6X8 837 aa7.21□□□□□ -1.26
HDAC8-212ENST00000421523 CHD8Q9HCK8 2581 aa7.21□□□□□ -1.26
HDAC8-212ENST00000421523 CACNA1FO60840 1977 aa7.2□□□□□ -1.26
HDAC8-212ENST00000421523 KMT2BQ9UMN6 2715 aaPredicted RBP7.2□□□□□ -1.26
HDAC8-212ENST00000421523 TRIM75PA6NK02 468 aa7.2□□□□□ -1.26
HDAC8-212ENST00000421523 ERC2O15083 957 aa7.2□□□□□ -1.26
HDAC8-212ENST00000421523 TAF5LO75529 589 aa7.2□□□□□ -1.26
HDAC8-212ENST00000421523 PCCAP05165 728 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms