RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 FERMT3Q86UX7 667 aa9.55□□□□□ -0.88
COL12A1-204ENST00000419671 SPDYE1Q8NFV5 336 aaPredicted RBP9.55□□□□□ -0.88
COL12A1-204ENST00000419671 IGDCC4Q8TDY8 1250 aa9.55□□□□□ -0.88
COL12A1-204ENST00000419671 IPO4Q8TEX9 1081 aaKnown RBP9.55□□□□□ -0.88
COL12A1-204ENST00000419671 STAG1Q8WVM7 1258 aa9.55□□□□□ -0.88
COL12A1-204ENST00000419671 CRAMP1Q96RY5 1269 aa9.55□□□□□ -0.88
COL12A1-204ENST00000419671 NACAP1Q9BZK3 213 aa9.55□□□□□ -0.88
COL12A1-204ENST00000419671 SENP2Q9HC62 589 aa9.55□□□□□ -0.88
COL12A1-204ENST00000419671 TMEM63CQ9P1W3 806 aa9.55□□□□□ -0.88
COL12A1-204ENST00000419671 ANGEL1Q9UNK9 670 aaKnown RBP9.55□□□□□ -0.88
COL12A1-204ENST00000419671 SMIM22K7EJ46 135 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 SH2B2O14492 632 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-204ENST00000419671 BBOX1O75936 387 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 NCLP19338 710 aaKnown RBP9.54□□□□□ -0.88
COL12A1-204ENST00000419671 FAM173BQ6P4H8 233 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 POTEAQ6S8J7 498 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 NLGN1Q8N2Q7 840 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 RBM27Q9P2N5 1060 aaKnown RBP9.54□□□□□ -0.88
COL12A1-204ENST00000419671 DDX60LQ5H9U9 1706 aaKnown RBP9.54□□□□□ -0.88
COL12A1-204ENST00000419671 GOLGA6L3A6NEY3 463 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 GOLGA8BA8MQT2 603 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 PPFIA3O75145 1194 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 KDM4AO75164 1064 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 UFL1O94874 794 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 MBD3O95983 291 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 PRR29P0C7W0 189 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 FDPSP14324 419 aaKnown RBP9.54□□□□□ -0.88
COL12A1-204ENST00000419671 HMGN5P82970 282 aaKnown RBP9.54□□□□□ -0.88
COL12A1-204ENST00000419671 PPARAQ07869 468 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 ZSCAN23Q3MJ62 389 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 MFSD6Q6ZSS7 791 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 RAB11FIP4Q86YS3 637 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 FAM184AQ8NB25 1140 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 TMEM87BQ96K49 555 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 BRIP1Q9BX63 1249 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 CNNM2Q9H8M5 875 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 LY9Q9HBG7 655 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 AATFQ9NY61 560 aaKnown RBP eCLIP9.54□□□□□ -0.88
COL12A1-204ENST00000419671 POLLQ9UGP5 575 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 ANAPC4Q9UJX5 808 aa9.54□□□□□ -0.88
COL12A1-204ENST00000419671 ZNF646O15015 1829 aaPredicted RBP9.54□□□□□ -0.88
COL12A1-204ENST00000419671 MYH1P12882 1939 aa9.53□□□□□ -0.88
COL12A1-204ENST00000419671 SLX4Q8IY92 1834 aa9.53□□□□□ -0.88
COL12A1-204ENST00000419671 FIBPO43427 364 aa9.53□□□□□ -0.88
COL12A1-204ENST00000419671 MMP10P09238 476 aa9.53□□□□□ -0.88
COL12A1-204ENST00000419671 SRGNP10124 158 aa9.53□□□□□ -0.88
COL12A1-204ENST00000419671 ATP2B4P23634 1241 aa9.53□□□□□ -0.88
COL12A1-204ENST00000419671 ZNF445P59923 1031 aa9.53□□□□□ -0.88
COL12A1-204ENST00000419671 RESTQ13127 1097 aa9.53□□□□□ -0.88
COL12A1-204ENST00000419671 GRIK5Q16478 980 aa9.53□□□□□ -0.88
COL12A1-204ENST00000419671 APOA5Q6Q788 366 aa9.53□□□□□ -0.88
COL12A1-204ENST00000419671 ZNF804AQ7Z570 1209 aa9.53□□□□□ -0.88
COL12A1-204ENST00000419671 SGMS1Q86VZ5 419 aa9.53□□□□□ -0.88
COL12A1-204ENST00000419671 TBC1D16Q8TBP0 767 aa9.53□□□□□ -0.88
COL12A1-204ENST00000419671 KRT23Q9C075 422 aa9.53□□□□□ -0.88
COL12A1-204ENST00000419671 CD209Q9NNX6 404 aa9.53□□□□□ -0.88
COL12A1-204ENST00000419671 GGA1Q9UJY5 639 aa9.53□□□□□ -0.88
COL12A1-204ENST00000419671 CYP2D7A0A087X1C5 515 aa9.52□□□□□ -0.88
COL12A1-204ENST00000419671 MINDY4BA8MYZ0 360 aa9.52□□□□□ -0.88
COL12A1-204ENST00000419671 IL1R1P14778 569 aa9.52□□□□□ -0.88
COL12A1-204ENST00000419671 STK11IPQ8N1F8 1099 aa9.52□□□□□ -0.88
COL12A1-204ENST00000419671 FLAD1Q8NFF5 587 aa9.52□□□□□ -0.88
COL12A1-204ENST00000419671 WDR66Q8TBY9 1149 aa9.52□□□□□ -0.88
COL12A1-204ENST00000419671 ZC3H15Q8WU90 426 aaKnown RBP9.52□□□□□ -0.88
COL12A1-204ENST00000419671 ADAMTSL1Q8N6G6 1762 aa9.52□□□□□ -0.89
COL12A1-204ENST00000419671 PPEF1O14829 653 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-204ENST00000419671 XRCC6P12956 609 aaKnown RBP eCLIP9.52□□□□□ -0.89
COL12A1-204ENST00000419671 RXRAP19793 462 aa9.52□□□□□ -0.89
COL12A1-204ENST00000419671 LIFRP42702 1097 aa9.52□□□□□ -0.89
COL12A1-204ENST00000419671 UBE2HP62256 183 aa9.52□□□□□ -0.89
COL12A1-204ENST00000419671 EVX2Q03828 476 aa9.52□□□□□ -0.89
COL12A1-204ENST00000419671 TMEM67Q5HYA8 995 aa9.52□□□□□ -0.89
COL12A1-204ENST00000419671 RRP12Q5JTH9 1297 aaKnown RBP9.52□□□□□ -0.89
COL12A1-204ENST00000419671 L1TD1Q5T7N2 865 aaKnown RBP9.52□□□□□ -0.89
COL12A1-204ENST00000419671 MSL1Q68DK7 614 aa9.52□□□□□ -0.89
COL12A1-204ENST00000419671 GIMAP6Q6P9H5 292 aa9.52□□□□□ -0.89
COL12A1-204ENST00000419671 CTR9Q6PD62 1173 aa9.52□□□□□ -0.89
COL12A1-204ENST00000419671 TMED8Q6PL24 325 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-204ENST00000419671 DZIP1Q86YF9 867 aaKnown RBP9.52□□□□□ -0.89
COL12A1-204ENST00000419671 DCP1AQ9NPI6 582 aaPredicted RBP9.52□□□□□ -0.89
COL12A1-204ENST00000419671 ISY1Q9ULR0 285 aaKnown RBP9.52□□□□□ -0.89
COL12A1-204ENST00000419671 H3BQV1 296 aa9.51□□□□□ -0.89
COL12A1-204ENST00000419671 LDHBP07195 334 aaKnown RBP9.51□□□□□ -0.89
COL12A1-204ENST00000419671 CDC27P30260 824 aa9.51□□□□□ -0.89
COL12A1-204ENST00000419671 FOSBP53539 338 aa9.51□□□□□ -0.89
COL12A1-204ENST00000419671 KRT85P78386 507 aa9.51□□□□□ -0.89
COL12A1-204ENST00000419671 IFFO2Q5TF58 517 aa9.51□□□□□ -0.89
COL12A1-204ENST00000419671 SPTY2D1Q68D10 685 aaPredicted RBP9.51□□□□□ -0.89
COL12A1-204ENST00000419671 TTC6Q86TZ1 520 aa9.51□□□□□ -0.89
COL12A1-204ENST00000419671 SP8Q8IXZ3 490 aa9.51□□□□□ -0.89
COL12A1-204ENST00000419671 CHMP4CQ96CF2 233 aa9.51□□□□□ -0.89
COL12A1-204ENST00000419671 ZKSCAN3Q9BRR0 538 aa9.51□□□□□ -0.89
COL12A1-204ENST00000419671 MYL10Q9BUA6 226 aa9.51□□□□□ -0.89
COL12A1-204ENST00000419671 RNF41Q9H4P4 317 aaPredicted RBP9.51□□□□□ -0.89
COL12A1-204ENST00000419671 GRPEL1Q9HAV7 217 aa9.51□□□□□ -0.89
COL12A1-204ENST00000419671 FAM217BQ9NTX9 383 aaPredicted RBP9.51□□□□□ -0.89
COL12A1-204ENST00000419671 ATP6V0A2Q9Y487 856 aa9.51□□□□□ -0.89
COL12A1-204ENST00000419671 NID2Q14112 1375 aa9.51□□□□□ -0.89
COL12A1-204ENST00000419671 MYH8P13535 1937 aa9.51□□□□□ -0.89
COL12A1-204ENST00000419671 SCN9AQ15858 1988 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms