RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 APOA5Q6Q788 366 aa22.55■■□□□ 1.2
RAB3IP-205ENST00000417413 C2CD5Q86YS7 1000 aa22.55■■□□□ 1.2
RAB3IP-205ENST00000417413 DCP1AQ9NPI6 582 aaPredicted RBP22.55■■□□□ 1.2
RAB3IP-205ENST00000417413 ATP8A2Q9NTI2 1148 aa22.55■■□□□ 1.2
RAB3IP-205ENST00000417413 KIF3AQ9Y496 699 aa22.55■■□□□ 1.2
RAB3IP-205ENST00000417413 IFIT3O14879 490 aaKnown RBP22.54■■□□□ 1.2
RAB3IP-205ENST00000417413 DHX16O60231 1041 aaKnown RBP22.54■■□□□ 1.2
RAB3IP-205ENST00000417413 GADD45BO75293 160 aaPredicted RBP22.54■■□□□ 1.2
RAB3IP-205ENST00000417413 FGRP09769 529 aa22.54■■□□□ 1.2
RAB3IP-205ENST00000417413 GSTO1P78417 241 aa22.54■■□□□ 1.2
RAB3IP-205ENST00000417413 RESTQ13127 1097 aa22.54■■□□□ 1.2
RAB3IP-205ENST00000417413 RRP12Q5JTH9 1297 aaKnown RBP22.54■■□□□ 1.2
RAB3IP-205ENST00000417413 RAB11FIP4Q86YS3 637 aa22.54■■□□□ 1.2
RAB3IP-205ENST00000417413 PDGFDQ9GZP0 370 aaPredicted RBP22.54■■□□□ 1.2
RAB3IP-205ENST00000417413 CYP2D7A0A087X1C5 515 aa22.53■■□□□ 1.2
RAB3IP-205ENST00000417413 R3HDM1Q15032 1099 aaKnown RBP22.53■■□□□ 1.2
RAB3IP-205ENST00000417413 CAVIN1Q6NZI2 390 aaKnown RBP22.53■■□□□ 1.2
RAB3IP-205ENST00000417413 STK11IPQ8N1F8 1099 aa22.53■■□□□ 1.2
RAB3IP-205ENST00000417413 DLEC1Q9Y238 1755 aa22.53■■□□□ 1.2
RAB3IP-205ENST00000417413 FAM205AQ6ZU69 1335 aa22.53■■□□□ 1.2
RAB3IP-205ENST00000417413 USP17L12C9JPN9 530 aa22.53■■□□□ 1.2
RAB3IP-205ENST00000417413 USP17L21D6R901 530 aa22.53■■□□□ 1.2
RAB3IP-205ENST00000417413 PPP4CP60510 307 aa22.53■■□□□ 1.2
RAB3IP-205ENST00000417413 SBK1Q52WX2 424 aa22.53■■□□□ 1.2
RAB3IP-205ENST00000417413 OLFM4Q6UX06 510 aa22.53■■□□□ 1.2
RAB3IP-205ENST00000417413 CNKSR1Q969H4 720 aa22.53■■□□□ 1.2
RAB3IP-205ENST00000417413 ECM29Q5VYK3 1845 aa22.52■■□□□ 1.2
RAB3IP-205ENST00000417413 H3BQV1 296 aa22.52■■□□□ 1.2
RAB3IP-205ENST00000417413 LDHCP07864 332 aa22.52■■□□□ 1.2
RAB3IP-205ENST00000417413 IFFO2Q5TF58 517 aa22.52■■□□□ 1.2
RAB3IP-205ENST00000417413 MPNDQ8N594 471 aa22.52■■□□□ 1.2
RAB3IP-205ENST00000417413 ZNF622Q969S3 477 aaKnown RBP eCLIP22.52■■□□□ 1.2
RAB3IP-205ENST00000417413 TOMM22Q9NS69 142 aa22.52■■□□□ 1.2
RAB3IP-205ENST00000417413 PCP11498 1178 aaKnown RBP22.51■■□□□ 1.19
RAB3IP-205ENST00000417413 METAP2P50579 478 aaKnown RBP eCLIP22.51■■□□□ 1.19
RAB3IP-205ENST00000417413 DIXDC1Q155Q3 683 aa22.51■■□□□ 1.19
RAB3IP-205ENST00000417413 FAM173BQ6P4H8 233 aa22.51■■□□□ 1.19
RAB3IP-205ENST00000417413 COA1Q9GZY4 146 aa22.51■■□□□ 1.19
RAB3IP-205ENST00000417413 RBM27Q9P2N5 1060 aaKnown RBP22.51■■□□□ 1.19
RAB3IP-205ENST00000417413 MKRN1Q9UHC7 482 aaKnown RBP22.51■■□□□ 1.19
RAB3IP-205ENST00000417413 NID2Q14112 1375 aa22.51■■□□□ 1.19
RAB3IP-205ENST00000417413 NAV1Q8NEY1 1877 aa22.51■■□□□ 1.19
RAB3IP-205ENST00000417413 SLX4Q8IY92 1834 aa22.51■■□□□ 1.19
RAB3IP-205ENST00000417413 MROH7-TTC4A0A0A0MT08 1334 aa22.51■■□□□ 1.19
RAB3IP-205ENST00000417413 GOLGA6L3A6NEY3 463 aa22.5■■□□□ 1.19
RAB3IP-205ENST00000417413 ZBTB43O43298 467 aa22.5■■□□□ 1.19
RAB3IP-205ENST00000417413 FIBPO43427 364 aa22.5■■□□□ 1.19
RAB3IP-205ENST00000417413 PPFIA3O75145 1194 aa22.5■■□□□ 1.19
RAB3IP-205ENST00000417413 ZBTB7AO95365 584 aa22.5■■□□□ 1.19
RAB3IP-205ENST00000417413 NFXL1Q6ZNB6 911 aa22.5■■□□□ 1.19
RAB3IP-205ENST00000417413 ESR2Q92731 530 aa22.5■■□□□ 1.19
RAB3IP-205ENST00000417413 ZKSCAN3Q9BRR0 538 aa22.5■■□□□ 1.19
RAB3IP-205ENST00000417413 RTFDC1Q9BY42 306 aaPredicted RBP22.5■■□□□ 1.19
RAB3IP-205ENST00000417413 ZSCAN16Q9H4T2 348 aaPredicted RBP22.5■■□□□ 1.19
RAB3IP-205ENST00000417413 FAM217BQ9NTX9 383 aaPredicted RBP22.5■■□□□ 1.19
RAB3IP-205ENST00000417413 TMEM63CQ9P1W3 806 aa22.5■■□□□ 1.19
RAB3IP-205ENST00000417413 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.5■■□□□ 1.19
RAB3IP-205ENST00000417413 RIMBP2O15034 1052 aa22.49■■□□□ 1.19
RAB3IP-205ENST00000417413 CDC27P30260 824 aa22.49■■□□□ 1.19
RAB3IP-205ENST00000417413 KRT85P78386 507 aa22.49■■□□□ 1.19
RAB3IP-205ENST00000417413 CSPP1Q1MSJ5 1256 aa22.49■■□□□ 1.19
RAB3IP-205ENST00000417413 SH3RF3Q8TEJ3 882 aaPredicted RBP22.49■■□□□ 1.19
RAB3IP-205ENST00000417413 TBC1D22AQ8WUA7 517 aa22.49■■□□□ 1.19
RAB3IP-205ENST00000417413 ARPP21Q9UBL0 812 aaPredicted RBP22.49■■□□□ 1.19
RAB3IP-205ENST00000417413 CPLX1O14810 134 aa22.49■■□□□ 1.19
RAB3IP-205ENST00000417413 ADD1P35611 737 aaKnown RBP22.49■■□□□ 1.19
RAB3IP-205ENST00000417413 ZNF445P59923 1031 aa22.49■■□□□ 1.19
RAB3IP-205ENST00000417413 EVX2Q03828 476 aa22.49■■□□□ 1.19
RAB3IP-205ENST00000417413 WTAPQ15007 396 aa22.49■■□□□ 1.19
RAB3IP-205ENST00000417413 SART3Q15020 963 aaKnown RBP22.49■■□□□ 1.19
RAB3IP-205ENST00000417413 SEC23AQ15436 765 aa22.49■■□□□ 1.19
RAB3IP-205ENST00000417413 ZSCAN23Q3MJ62 389 aa22.49■■□□□ 1.19
RAB3IP-205ENST00000417413 DPP8Q6V1X1 898 aaPredicted RBP22.49■■□□□ 1.19
RAB3IP-205ENST00000417413 GAS2L3Q86XJ1 694 aa22.49■■□□□ 1.19
RAB3IP-205ENST00000417413 ORC3Q9UBD5 711 aaPredicted RBP22.49■■□□□ 1.19
RAB3IP-205ENST00000417413 ISY1Q9ULR0 285 aaKnown RBP22.49■■□□□ 1.19
RAB3IP-205ENST00000417413 CCDC69A6NI79 296 aa22.48■■□□□ 1.19
RAB3IP-205ENST00000417413 ORC4O43929 436 aa22.48■■□□□ 1.19
RAB3IP-205ENST00000417413 BAG3O95817 575 aa22.48■■□□□ 1.19
RAB3IP-205ENST00000417413 CYP2D6P10635 497 aa22.48■■□□□ 1.19
RAB3IP-205ENST00000417413 RXRAP19793 462 aa22.48■■□□□ 1.19
RAB3IP-205ENST00000417413 UBE2HP62256 183 aa22.48■■□□□ 1.19
RAB3IP-205ENST00000417413 NTRK3Q16288 839 aa22.48■■□□□ 1.19
RAB3IP-205ENST00000417413 MFSD14BQ5SR56 506 aa22.48■■□□□ 1.19
RAB3IP-205ENST00000417413 MICU3Q86XE3 530 aa22.48■■□□□ 1.19
RAB3IP-205ENST00000417413 TMTC2Q8N394 836 aa22.48■■□□□ 1.19
RAB3IP-205ENST00000417413 FAM163AQ96GL9 167 aaPredicted RBP22.48■■□□□ 1.19
RAB3IP-205ENST00000417413 SLC12A7Q9Y666 1083 aa22.48■■□□□ 1.19
RAB3IP-205ENST00000417413 C10orf71Q711Q0 1435 aa22.48■■□□□ 1.19
RAB3IP-205ENST00000417413 GOLGA8AA7E2F4 631 aa22.47■■□□□ 1.19
RAB3IP-205ENST00000417413 FOSBP53539 338 aa22.47■■□□□ 1.19
RAB3IP-205ENST00000417413 L1TD1Q5T7N2 865 aaKnown RBP22.47■■□□□ 1.19
RAB3IP-205ENST00000417413 MYL10Q9BUA6 226 aa22.47■■□□□ 1.19
RAB3IP-205ENST00000417413 ZC3H12CQ9C0D7 883 aaKnown RBP22.47■■□□□ 1.19
RAB3IP-205ENST00000417413 DDX60LQ5H9U9 1706 aaKnown RBP22.47■■□□□ 1.19
RAB3IP-205ENST00000417413 GPR75-ASB3A0A0A6YYF3 556 aa22.46■■□□□ 1.19
RAB3IP-205ENST00000417413 ERICH2A1L162 156 aa22.46■■□□□ 1.19
RAB3IP-205ENST00000417413 TTC6Q86TZ1 520 aa22.46■■□□□ 1.19
RAB3IP-205ENST00000417413 RGS22Q8NE09 1264 aa22.46■■□□□ 1.19
RAB3IP-205ENST00000417413 UBAC1Q9BSL1 405 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms