RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 A0A1W2PPC1 479 aa11.76□□□□□ -0.53
LINC01238-201ENST00000416204 PHF20L1A8MW92 1017 aa11.76□□□□□ -0.53
LINC01238-201ENST00000416204 CXCL11O14625 94 aa11.76□□□□□ -0.53
LINC01238-201ENST00000416204 PTPRAP18433 802 aa11.76□□□□□ -0.53
LINC01238-201ENST00000416204 MAGEA10P43363 369 aaPredicted RBP11.76□□□□□ -0.53
LINC01238-201ENST00000416204 TREML2Q5T2D2 321 aa11.76□□□□□ -0.53
LINC01238-201ENST00000416204 NECAB2Q7Z6G3 386 aa11.76□□□□□ -0.53
LINC01238-201ENST00000416204 ZSCAN29Q8IWY8 852 aaPredicted RBP11.76□□□□□ -0.53
LINC01238-201ENST00000416204 GDF15Q99988 308 aa11.76□□□□□ -0.53
LINC01238-201ENST00000416204 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.76□□□□□ -0.53
LINC01238-201ENST00000416204 PAK6Q9NQU5 681 aaPredicted RBP11.76□□□□□ -0.53
LINC01238-201ENST00000416204 MGAMO43451 1857 aa11.75□□□□□ -0.53
LINC01238-201ENST00000416204 IFIT1P09914 478 aaKnown RBP11.75□□□□□ -0.53
LINC01238-201ENST00000416204 RGS3P49796 1198 aa11.75□□□□□ -0.53
LINC01238-201ENST00000416204 MNX1P50219 401 aaPredicted RBP11.75□□□□□ -0.53
LINC01238-201ENST00000416204 PUM3Q15397 648 aaKnown RBP11.75□□□□□ -0.53
LINC01238-201ENST00000416204 SH3BP5LQ7L8J4 393 aa11.75□□□□□ -0.53
LINC01238-201ENST00000416204 SCYL3Q8IZE3 742 aa11.75□□□□□ -0.53
LINC01238-201ENST00000416204 MRIQ9BWK5 157 aa11.75□□□□□ -0.53
LINC01238-201ENST00000416204 CRISPLD2Q9H0B8 497 aa11.75□□□□□ -0.53
LINC01238-201ENST00000416204 AFG3L2Q9Y4W6 797 aa11.75□□□□□ -0.53
LINC01238-201ENST00000416204 AK9Q5TCS8 1911 aa11.75□□□□□ -0.53
LINC01238-201ENST00000416204 ALPK3Q96L96 1907 aa11.75□□□□□ -0.53
LINC01238-201ENST00000416204 FAM196BA6NMK8 535 aa11.74□□□□□ -0.53
LINC01238-201ENST00000416204 PEX10O60683 326 aa11.74□□□□□ -0.53
LINC01238-201ENST00000416204 LDHBP07195 334 aaKnown RBP11.74□□□□□ -0.53
LINC01238-201ENST00000416204 FGFR2P21802 821 aa11.74□□□□□ -0.53
LINC01238-201ENST00000416204 PICALMQ13492 652 aa11.74□□□□□ -0.53
LINC01238-201ENST00000416204 FASTKD5Q7L8L6 764 aaKnown RBP11.74□□□□□ -0.53
LINC01238-201ENST00000416204 WDR66Q8TBY9 1149 aa11.74□□□□□ -0.53
LINC01238-201ENST00000416204 PXYLP1Q8TE99 480 aa11.74□□□□□ -0.53
LINC01238-201ENST00000416204 COL25A1Q9BXS0 654 aaPredicted RBP11.74□□□□□ -0.53
LINC01238-201ENST00000416204 SUGT1Q9Y2Z0 365 aa11.74□□□□□ -0.53
LINC01238-201ENST00000416204 LRRFIP2Q9Y608 721 aaKnown RBP11.74□□□□□ -0.53
LINC01238-201ENST00000416204 ATRNL1Q5VV63 1379 aa11.74□□□□□ -0.53
LINC01238-201ENST00000416204 DNAH12Q6ZR08 3092 aa11.74□□□□□ -0.53
LINC01238-201ENST00000416204 DDTLA6NHG4 134 aaPredicted RBP11.73□□□□□ -0.53
LINC01238-201ENST00000416204 SLC5A1P13866 664 aa11.73□□□□□ -0.53
LINC01238-201ENST00000416204 IRF5Q13568 498 aa11.73□□□□□ -0.53
LINC01238-201ENST00000416204 RABL6Q3YEC7 729 aaPredicted RBP11.73□□□□□ -0.53
LINC01238-201ENST00000416204 COA7Q96BR5 231 aa11.73□□□□□ -0.53
LINC01238-201ENST00000416204 FAM161BQ96MY7 647 aa11.73□□□□□ -0.53
LINC01238-201ENST00000416204 UBE2OQ9C0C9 1292 aaKnown RBP11.73□□□□□ -0.53
LINC01238-201ENST00000416204 SIL1Q9H173 461 aa11.73□□□□□ -0.53
LINC01238-201ENST00000416204 DDX4Q9NQI0 724 aaKnown RBP11.73□□□□□ -0.53
LINC01238-201ENST00000416204 MTMR10Q9NXD2 777 aa11.73□□□□□ -0.53
LINC01238-201ENST00000416204 SPTBN5Q9NRC6 3674 aaKnown RBP11.72□□□□□ -0.53
LINC01238-201ENST00000416204 NBPF3Q9H094 633 aa11.72□□□□□ -0.53
LINC01238-201ENST00000416204 C11orf49Q9H6J7 331 aa11.72□□□□□ -0.53
LINC01238-201ENST00000416204 STXBP5LQ9Y2K9 1186 aa11.72□□□□□ -0.53
LINC01238-201ENST00000416204 UTYO14607 1347 aa11.71□□□□□ -0.53
LINC01238-201ENST00000416204 HMGCRP04035 888 aa11.71□□□□□ -0.53
LINC01238-201ENST00000416204 ADORA1P30542 326 aa11.71□□□□□ -0.53
LINC01238-201ENST00000416204 BMP8BP34820 402 aa11.71□□□□□ -0.53
LINC01238-201ENST00000416204 PHKA1P46020 1223 aa11.71□□□□□ -0.53
LINC01238-201ENST00000416204 MDM2Q00987 491 aaPredicted RBP11.71□□□□□ -0.53
LINC01238-201ENST00000416204 TDHQ8IZJ6 230 aa11.71□□□□□ -0.53
LINC01238-201ENST00000416204 AGTPBP1Q9UPW5 1226 aa11.71□□□□□ -0.53
LINC01238-201ENST00000416204 PRUNE2Q8WUY3 3088 aa11.71□□□□□ -0.53
LINC01238-201ENST00000416204 EYA2O00167 538 aa11.7□□□□□ -0.54
LINC01238-201ENST00000416204 CYP2B6P20813 491 aa11.7□□□□□ -0.54
LINC01238-201ENST00000416204 ATP2B3Q16720 1220 aa11.7□□□□□ -0.54
LINC01238-201ENST00000416204 ATG9AQ7Z3C6 839 aa11.7□□□□□ -0.54
LINC01238-201ENST00000416204 WDR63Q8IWG1 891 aa11.7□□□□□ -0.54
LINC01238-201ENST00000416204 LPIN2Q92539 896 aa11.7□□□□□ -0.54
LINC01238-201ENST00000416204 HMX1Q9NP08 348 aaPredicted RBP11.7□□□□□ -0.54
LINC01238-201ENST00000416204 SLC45A1Q9Y2W3 748 aa11.7□□□□□ -0.54
LINC01238-201ENST00000416204 PFASO15067 1338 aa11.69□□□□□ -0.54
LINC01238-201ENST00000416204 CTNND1O60716 968 aaKnown RBP11.69□□□□□ -0.54
LINC01238-201ENST00000416204 RFX5P48382 616 aaPredicted RBP11.69□□□□□ -0.54
LINC01238-201ENST00000416204 HMGCS2P54868 508 aa11.69□□□□□ -0.54
LINC01238-201ENST00000416204 SPP2Q13103 211 aa11.69□□□□□ -0.54
LINC01238-201ENST00000416204 FAM110CQ1W6H9 321 aa11.69□□□□□ -0.54
LINC01238-201ENST00000416204 LRIT3Q3SXY7 679 aa11.69□□□□□ -0.54
LINC01238-201ENST00000416204 DZIP1Q86YF9 867 aaKnown RBP11.69□□□□□ -0.54
LINC01238-201ENST00000416204 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.69□□□□□ -0.54
LINC01238-201ENST00000416204 TRIB2Q92519 343 aa11.69□□□□□ -0.54
LINC01238-201ENST00000416204 ABCF2Q9UG63 623 aa11.69□□□□□ -0.54
LINC01238-201ENST00000416204 GJD2Q9UKL4 321 aa11.69□□□□□ -0.54
LINC01238-201ENST00000416204 DOCK2Q92608 1830 aa11.69□□□□□ -0.54
LINC01238-201ENST00000416204 DOCK3Q8IZD9 2030 aa11.69□□□□□ -0.54
LINC01238-201ENST00000416204 DDX60LQ5H9U9 1706 aaKnown RBP11.69□□□□□ -0.54
LINC01238-201ENST00000416204 RPTORQ8N122 1335 aa11.68□□□□□ -0.54
LINC01238-201ENST00000416204 KIF16BQ96L93 1317 aa11.68□□□□□ -0.54
LINC01238-201ENST00000416204 ENTPD3O75355 529 aa11.68□□□□□ -0.54
LINC01238-201ENST00000416204 PRKAR2AP13861 404 aaKnown RBP11.68□□□□□ -0.54
LINC01238-201ENST00000416204 BTDP43251 543 aa11.68□□□□□ -0.54
LINC01238-201ENST00000416204 RRP1BQ14684 758 aaKnown RBP11.68□□□□□ -0.54
LINC01238-201ENST00000416204 GUCD1Q96NT3 240 aa11.68□□□□□ -0.54
LINC01238-201ENST00000416204 IDI2Q9BXS1 227 aa11.68□□□□□ -0.54
LINC01238-201ENST00000416204 USP44Q9H0E7 712 aa11.68□□□□□ -0.54
LINC01238-201ENST00000416204 ASCC2Q9H1I8 757 aaPredicted RBP11.68□□□□□ -0.54
LINC01238-201ENST00000416204 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.68□□□□□ -0.54
LINC01238-201ENST00000416204 MRS2Q9HD23 443 aa11.68□□□□□ -0.54
LINC01238-201ENST00000416204 GNL3LQ9NVN8 582 aaKnown RBP11.68□□□□□ -0.54
LINC01238-201ENST00000416204 CACNA1FO60840 1977 aa11.68□□□□□ -0.54
LINC01238-201ENST00000416204 MYH13Q9UKX3 1938 aa11.68□□□□□ -0.54
LINC01238-201ENST00000416204 RFX7Q2KHR2 1363 aa11.67□□□□□ -0.54
LINC01238-201ENST00000416204 LRRC26Q2I0M4 334 aa11.67□□□□□ -0.54
LINC01238-201ENST00000416204 GPR153Q6NV75 609 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms