RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.96□□□□□ -0.49
COL12A1-203ENST00000416123 FNBP1Q96RU3 617 aa11.96□□□□□ -0.5
COL12A1-203ENST00000416123 VPS16Q9H269 839 aa11.96□□□□□ -0.5
COL12A1-203ENST00000416123 MROH5Q6ZUA9 1318 aa11.96□□□□□ -0.5
COL12A1-203ENST00000416123 PDE4DQ08499 809 aa11.96□□□□□ -0.5
COL12A1-203ENST00000416123 CCDC114Q96M63 670 aa11.96□□□□□ -0.5
COL12A1-203ENST00000416123 IQUBQ8NA54 791 aa11.95□□□□□ -0.5
COL12A1-203ENST00000416123 TTF2Q9UNY4 1162 aaKnown RBP11.95□□□□□ -0.5
COL12A1-203ENST00000416123 EIF4A1P60842 406 aaKnown RBP11.95□□□□□ -0.5
COL12A1-203ENST00000416123 KIF5AQ12840 1032 aa11.95□□□□□ -0.5
COL12A1-203ENST00000416123 CCDC25Q86WR0 208 aa11.95□□□□□ -0.5
COL12A1-203ENST00000416123 CCDC42Q96M95 316 aa11.95□□□□□ -0.5
COL12A1-203ENST00000416123 GPHNQ9NQX3 736 aaPredicted RBP11.95□□□□□ -0.5
COL12A1-203ENST00000416123 PER1O15534 1290 aaPredicted RBP11.95□□□□□ -0.5
COL12A1-203ENST00000416123 DEXIO95424 95 aa11.95□□□□□ -0.5
COL12A1-203ENST00000416123 CFBP00751 764 aa11.95□□□□□ -0.5
COL12A1-203ENST00000416123 MCM6Q14566 821 aa11.95□□□□□ -0.5
COL12A1-203ENST00000416123 FAM173BQ6P4H8 233 aa11.95□□□□□ -0.5
COL12A1-203ENST00000416123 PPP1R9BQ96SB3 815 aa11.95□□□□□ -0.5
COL12A1-203ENST00000416123 KCNJ14Q9UNX9 436 aa11.95□□□□□ -0.5
COL12A1-203ENST00000416123 CAVIN2O95810 425 aa11.95□□□□□ -0.5
COL12A1-203ENST00000416123 EPB41P11171 864 aaKnown RBP11.95□□□□□ -0.5
COL12A1-203ENST00000416123 GYG1P46976 350 aa11.95□□□□□ -0.5
COL12A1-203ENST00000416123 CCDC63Q8NA47 563 aa11.95□□□□□ -0.5
COL12A1-203ENST00000416123 PUS7Q96PZ0 661 aaKnown RBP11.95□□□□□ -0.5
COL12A1-203ENST00000416123 SHROOM2Q13796 1616 aa11.95□□□□□ -0.5
COL12A1-203ENST00000416123 SDR42E1Q8WUS8 393 aa11.95□□□□□ -0.5
COL12A1-203ENST00000416123 MAK16Q9BXY0 300 aaKnown RBP11.95□□□□□ -0.5
COL12A1-203ENST00000416123 ALDH1B1P30837 517 aa11.95□□□□□ -0.5
COL12A1-203ENST00000416123 CKAP4Q07065 602 aaKnown RBP11.95□□□□□ -0.5
COL12A1-203ENST00000416123 TCP10L2B9ZVM9 353 aa11.95□□□□□ -0.5
COL12A1-203ENST00000416123 POTEB2H3BUK9 544 aa11.95□□□□□ -0.5
COL12A1-203ENST00000416123 CHL1O00533 1208 aa11.95□□□□□ -0.5
COL12A1-203ENST00000416123 TRIM6Q9C030 488 aaPredicted RBP11.95□□□□□ -0.5
COL12A1-203ENST00000416123 USP40Q9NVE5 1235 aa11.95□□□□□ -0.5
COL12A1-203ENST00000416123 ELP1O95163 1332 aa11.94□□□□□ -0.5
COL12A1-203ENST00000416123 TACC1O75410 805 aa11.94□□□□□ -0.5
COL12A1-203ENST00000416123 CCDC155Q8N6L0 562 aa11.94□□□□□ -0.5
COL12A1-203ENST00000416123 GTF2F1P35269 517 aaKnown RBP eCLIP11.94□□□□□ -0.5
COL12A1-203ENST00000416123 GPR162Q16538 588 aa11.94□□□□□ -0.5
COL12A1-203ENST00000416123 ZNF569Q5MCW4 686 aa11.94□□□□□ -0.5
COL12A1-203ENST00000416123 SMC5Q8IY18 1101 aa11.94□□□□□ -0.5
COL12A1-203ENST00000416123 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.94□□□□□ -0.5
COL12A1-203ENST00000416123 RASAL2Q9UJF2 1139 aa11.94□□□□□ -0.5
COL12A1-203ENST00000416123 AK9Q5TCS8 1911 aa11.94□□□□□ -0.5
COL12A1-203ENST00000416123 TRIM37O94972 964 aa11.94□□□□□ -0.5
COL12A1-203ENST00000416123 DYMQ7RTS9 669 aa11.94□□□□□ -0.5
COL12A1-203ENST00000416123 CEP112Q8N8E3 955 aa11.94□□□□□ -0.5
COL12A1-203ENST00000416123 PAXBP1Q9Y5B6 917 aa11.94□□□□□ -0.5
COL12A1-203ENST00000416123 IVNS1ABPQ9Y6Y0 642 aa11.94□□□□□ -0.5
COL12A1-203ENST00000416123 MFSD14BQ5SR56 506 aa11.94□□□□□ -0.5
COL12A1-203ENST00000416123 BCAMP50895 628 aa11.94□□□□□ -0.5
COL12A1-203ENST00000416123 RNASE9P60153 205 aaKnown RBP11.94□□□□□ -0.5
COL12A1-203ENST00000416123 IFT81Q8WYA0 676 aa11.94□□□□□ -0.5
COL12A1-203ENST00000416123 TMEM87BQ96K49 555 aa11.94□□□□□ -0.5
COL12A1-203ENST00000416123 CALCRLQ16602 461 aa11.94□□□□□ -0.5
COL12A1-203ENST00000416123 ARHGAP27Q6ZUM4 889 aa11.94□□□□□ -0.5
COL12A1-203ENST00000416123 NOC4LQ9BVI4 516 aaKnown RBP11.94□□□□□ -0.5
COL12A1-203ENST00000416123 VPS54Q9P1Q0 977 aa11.94□□□□□ -0.5
COL12A1-203ENST00000416123 DLGAP5Q15398 846 aa11.93□□□□□ -0.5
COL12A1-203ENST00000416123 GRIPAP1Q4V328 841 aa11.93□□□□□ -0.5
COL12A1-203ENST00000416123 SPAG1Q07617 926 aa11.93□□□□□ -0.5
COL12A1-203ENST00000416123 UGGT1Q9NYU2 1555 aa11.93□□□□□ -0.5
COL12A1-203ENST00000416123 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.93□□□□□ -0.5
COL12A1-203ENST00000416123 RAD50Q92878 1312 aa11.93□□□□□ -0.5
COL12A1-203ENST00000416123 FERP16591 822 aa11.93□□□□□ -0.5
COL12A1-203ENST00000416123 MLH3Q9UHC1 1453 aa11.93□□□□□ -0.5
COL12A1-203ENST00000416123 MAST3O60307 1309 aa11.93□□□□□ -0.5
COL12A1-203ENST00000416123 TFAP4Q01664 338 aa11.93□□□□□ -0.5
COL12A1-203ENST00000416123 NOLC1Q14978 699 aaKnown RBP eCLIP11.93□□□□□ -0.5
COL12A1-203ENST00000416123 BBXQ8WY36 941 aaPredicted RBP11.93□□□□□ -0.5
COL12A1-203ENST00000416123 PAGR1Q9BTK6 254 aa11.93□□□□□ -0.5
COL12A1-203ENST00000416123 PHKG2P15735 406 aa11.93□□□□□ -0.5
COL12A1-203ENST00000416123 SMTNP53814 917 aa11.93□□□□□ -0.5
COL12A1-203ENST00000416123 WDR44Q5JSH3 913 aa11.93□□□□□ -0.5
COL12A1-203ENST00000416123 AGTPBP1Q9UPW5 1226 aa11.93□□□□□ -0.5
COL12A1-203ENST00000416123 STRN3Q13033 797 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 TICAM2Q86XR7 235 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 KBTBD3Q8NAB2 608 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 LRRC45Q96CN5 670 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 YEATS2Q9ULM3 1422 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 KDM6BO15054 1643 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 CTAGE15A4D2H0 777 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 ARHGEF35A5YM69 484 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 JAK2O60674 1132 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 CTAGE8P0CG41 777 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 NSMFQ6X4W1 530 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 CTAGE6Q86UF2 777 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 CTAGE4Q8IX94 777 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 IFT74Q96LB3 600 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 CEP63Q96MT8 703 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 GCNT3O95395 438 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 PDE6BP35913 854 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 KIAA0825Q8IV33 1275 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 QTRT2Q9H974 415 aaKnown RBP11.92□□□□□ -0.5
COL12A1-203ENST00000416123 H7C1D1 291 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 ZBED4O75132 1171 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 RHOXF2BP0C7M4 288 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 ANO1Q5XXA6 986 aa11.92□□□□□ -0.5
COL12A1-203ENST00000416123 STAMQ92783 540 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms