RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 NBPF11Q86T75 865 aa14.53□□□□□ -0.08
SCN1B-202ENST00000415950 NAA16Q6N069 864 aaPredicted RBP14.53□□□□□ -0.08
SCN1B-202ENST00000415950 PI4K2BQ8TCG2 481 aa14.53□□□□□ -0.08
SCN1B-202ENST00000415950 PPP1R13BQ96KQ4 1090 aa14.53□□□□□ -0.08
SCN1B-202ENST00000415950 PSMD1Q99460 953 aa14.53□□□□□ -0.08
SCN1B-202ENST00000415950 SELENOSQ9BQE4 189 aa14.53□□□□□ -0.08
SCN1B-202ENST00000415950 EYA2O00167 538 aa14.53□□□□□ -0.08
SCN1B-202ENST00000415950 GRIPAP1Q4V328 841 aa14.53□□□□□ -0.08
SCN1B-202ENST00000415950 CPLX4Q7Z7G2 160 aa14.53□□□□□ -0.08
SCN1B-202ENST00000415950 PGBD1Q96JS3 809 aa14.53□□□□□ -0.08
SCN1B-202ENST00000415950 ARMT1Q9H993 441 aa14.53□□□□□ -0.08
SCN1B-202ENST00000415950 RMND1Q9NWS8 449 aa14.53□□□□□ -0.08
SCN1B-202ENST00000415950 BTBD18B2RXH4 712 aa14.53□□□□□ -0.08
SCN1B-202ENST00000415950 HGSO14964 777 aaPredicted RBP14.53□□□□□ -0.08
SCN1B-202ENST00000415950 ADAMTS2O95450 1211 aa14.53□□□□□ -0.08
SCN1B-202ENST00000415950 CHGBP05060 677 aa14.53□□□□□ -0.08
SCN1B-202ENST00000415950 HPDP32754 393 aaPredicted RBP14.53□□□□□ -0.08
SCN1B-202ENST00000415950 XAGE2Q96GT9 111 aa14.53□□□□□ -0.08
SCN1B-202ENST00000415950 CCDC114Q96M63 670 aa14.53□□□□□ -0.08
SCN1B-202ENST00000415950 LLPHQ9BRT6 129 aaKnown RBP14.53□□□□□ -0.08
SCN1B-202ENST00000415950 HSPD1P10809 573 aaKnown RBP14.52□□□□□ -0.08
SCN1B-202ENST00000415950 GRAMD1CQ8IYS0 662 aa14.52□□□□□ -0.08
SCN1B-202ENST00000415950 CUL5Q93034 780 aa14.52□□□□□ -0.08
SCN1B-202ENST00000415950 PPP2R2CQ9Y2T4 447 aa14.52□□□□□ -0.08
SCN1B-202ENST00000415950 KIAA0232Q92628 1395 aa14.52□□□□□ -0.08
SCN1B-202ENST00000415950 SYNMO15061 1565 aa14.52□□□□□ -0.08
SCN1B-202ENST00000415950 ESR2Q92731 530 aa14.52□□□□□ -0.09
SCN1B-202ENST00000415950 METTL22Q9BUU2 404 aaPredicted RBP14.52□□□□□ -0.09
SCN1B-202ENST00000415950 OPA1O60313 960 aa14.52□□□□□ -0.09
SCN1B-202ENST00000415950 GIGYF1O75420 1035 aaPredicted RBP14.52□□□□□ -0.09
SCN1B-202ENST00000415950 CLCN6P51797 869 aa14.52□□□□□ -0.09
SCN1B-202ENST00000415950 PTPROQ16827 1216 aa14.52□□□□□ -0.09
SCN1B-202ENST00000415950 CCDC25Q86WR0 208 aa14.52□□□□□ -0.09
SCN1B-202ENST00000415950 PPP1R14CQ8TAE6 165 aa14.52□□□□□ -0.09
SCN1B-202ENST00000415950 ORAI2Q96SN7 254 aa14.52□□□□□ -0.09
SCN1B-202ENST00000415950 PDE11AQ9HCR9 933 aa14.52□□□□□ -0.09
SCN1B-202ENST00000415950 IMPACTQ9P2X3 320 aa14.52□□□□□ -0.09
SCN1B-202ENST00000415950 LRRC24Q50LG9 513 aa14.51□□□□□ -0.09
SCN1B-202ENST00000415950 TTC19Q6DKK2 380 aaPredicted RBP14.51□□□□□ -0.09
SCN1B-202ENST00000415950 CCDC121Q6ZUS5 278 aa14.51□□□□□ -0.09
SCN1B-202ENST00000415950 PDIA3P30101 505 aaKnown RBP14.51□□□□□ -0.09
SCN1B-202ENST00000415950 KCNF1Q9H3M0 494 aa14.51□□□□□ -0.09
SCN1B-202ENST00000415950 MAST1Q9Y2H9 1570 aa14.51□□□□□ -0.09
SCN1B-202ENST00000415950 EDC4Q6P2E9 1401 aaKnown RBP14.51□□□□□ -0.09
SCN1B-202ENST00000415950 TMEM110-MUSTN1A8MSY1 372 aa14.51□□□□□ -0.09
SCN1B-202ENST00000415950 TBC1D8BQ0IIM8 1120 aa14.51□□□□□ -0.09
SCN1B-202ENST00000415950 SMYD4Q8IYR2 804 aaPredicted RBP14.51□□□□□ -0.09
SCN1B-202ENST00000415950 NAPGQ99747 312 aaPredicted RBP14.51□□□□□ -0.09
SCN1B-202ENST00000415950 TBCAO75347 108 aaKnown RBP14.51□□□□□ -0.09
SCN1B-202ENST00000415950 POSTNQ15063 836 aa14.51□□□□□ -0.09
SCN1B-202ENST00000415950 PI16Q6UXB8 463 aa14.51□□□□□ -0.09
SCN1B-202ENST00000415950 IP6K1Q92551 441 aa14.51□□□□□ -0.09
SCN1B-202ENST00000415950 VPS54Q9P1Q0 977 aa14.51□□□□□ -0.09
SCN1B-202ENST00000415950 RIMBP3CA6NJZ7 1639 aa14.51□□□□□ -0.09
SCN1B-202ENST00000415950 RIMBP3BA6NNM3 1639 aa14.51□□□□□ -0.09
SCN1B-202ENST00000415950 RIMBP3Q9UFD9 1639 aa14.51□□□□□ -0.09
SCN1B-202ENST00000415950 NEO1Q92859 1461 aa14.5□□□□□ -0.09
SCN1B-202ENST00000415950 FGAP02671 866 aa14.5□□□□□ -0.09
SCN1B-202ENST00000415950 ATP5JP18859 108 aa14.5□□□□□ -0.09
SCN1B-202ENST00000415950 MSL1Q68DK7 614 aa14.5□□□□□ -0.09
SCN1B-202ENST00000415950 HELLSQ9NRZ9 838 aa14.5□□□□□ -0.09
SCN1B-202ENST00000415950 IKBKGQ9Y6K9 419 aa14.5□□□□□ -0.09
SCN1B-202ENST00000415950 ENC1O14682 589 aa14.5□□□□□ -0.09
SCN1B-202ENST00000415950 VAV2P52735 878 aa14.5□□□□□ -0.09
SCN1B-202ENST00000415950 HNRNPH2P55795 449 aaKnown RBP14.5□□□□□ -0.09
SCN1B-202ENST00000415950 MXRA7P84157 204 aa14.5□□□□□ -0.09
SCN1B-202ENST00000415950 KMT5BQ4FZB7 885 aa14.5□□□□□ -0.09
SCN1B-202ENST00000415950 CNGA4Q8IV77 575 aa14.5□□□□□ -0.09
SCN1B-202ENST00000415950 KDM5DQ9BY66 1539 aa14.5□□□□□ -0.09
SCN1B-202ENST00000415950 NEURL1BA8MQ27 555 aa14.5□□□□□ -0.09
SCN1B-202ENST00000415950 KRT83P78385 493 aa14.5□□□□□ -0.09
SCN1B-202ENST00000415950 IRX3P78415 501 aaPredicted RBP14.5□□□□□ -0.09
SCN1B-202ENST00000415950 ZBTB16Q05516 673 aa14.5□□□□□ -0.09
SCN1B-202ENST00000415950 NECTIN1Q15223 517 aa14.5□□□□□ -0.09
SCN1B-202ENST00000415950 NSUN7Q8NE18 718 aaKnown RBP14.5□□□□□ -0.09
SCN1B-202ENST00000415950 KRT23Q9C075 422 aa14.5□□□□□ -0.09
SCN1B-202ENST00000415950 SASH1O94885 1247 aa14.49□□□□□ -0.09
SCN1B-202ENST00000415950 TUBB4AP04350 444 aa14.49□□□□□ -0.09
SCN1B-202ENST00000415950 DDX17Q92841 729 aaKnown RBP14.49□□□□□ -0.09
SCN1B-202ENST00000415950 PYM1Q9BRP8 204 aaKnown RBP14.49□□□□□ -0.09
SCN1B-202ENST00000415950 NDUFAB1O14561 156 aa14.49□□□□□ -0.09
SCN1B-202ENST00000415950 KIF4AO95239 1232 aa14.49□□□□□ -0.09
SCN1B-202ENST00000415950 CFAP58Q5T655 872 aa14.49□□□□□ -0.09
SCN1B-202ENST00000415950 ATL3Q6DD88 541 aa14.49□□□□□ -0.09
SCN1B-202ENST00000415950 PIK3AP1Q6ZUJ8 805 aa14.49□□□□□ -0.09
SCN1B-202ENST00000415950 IQUBQ8NA54 791 aa14.49□□□□□ -0.09
SCN1B-202ENST00000415950 FAM76AQ8TAV0 307 aa14.49□□□□□ -0.09
SCN1B-202ENST00000415950 PUS3Q9BZE2 481 aaKnown RBP14.49□□□□□ -0.09
SCN1B-202ENST00000415950 PLCB3Q01970 1234 aa14.49□□□□□ -0.09
SCN1B-202ENST00000415950 SPTLC3Q9NUV7 552 aa14.49□□□□□ -0.09
SCN1B-202ENST00000415950 TERF2Q15554 542 aa14.49□□□□□ -0.09
SCN1B-202ENST00000415950 FBXO18Q8NFZ0 1043 aa14.49□□□□□ -0.09
SCN1B-202ENST00000415950 SELENOOQ9BVL4 669 aa14.49□□□□□ -0.09
SCN1B-202ENST00000415950 PFKFB2O60825 505 aa14.48□□□□□ -0.09
SCN1B-202ENST00000415950 ACTN2P35609 894 aa14.48□□□□□ -0.09
SCN1B-202ENST00000415950 MRPS25P82663 173 aaKnown RBP14.48□□□□□ -0.09
SCN1B-202ENST00000415950 IFI16Q16666 785 aaKnown RBP14.48□□□□□ -0.09
SCN1B-202ENST00000415950 CLEC17AQ6ZS10 378 aa14.48□□□□□ -0.09
SCN1B-202ENST00000415950 SND1Q7KZF4 910 aaKnown RBP eCLIP14.48□□□□□ -0.09
SCN1B-202ENST00000415950 ANKRD13CQ8N6S4 541 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms