RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 TOP6BLQ8N6T0 577 aa6.41□□□□□ -1.38
TRAPPC13-203ENST00000415825 FBXO15Q8NCQ5 510 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC13-203ENST00000415825 CCDC97Q96F63 343 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC13-203ENST00000415825 TCF12Q99081 682 aa6.41□□□□□ -1.38
TRAPPC13-203ENST00000415825 ZC3H12CQ9C0D7 883 aaKnown RBP6.41□□□□□ -1.38
TRAPPC13-203ENST00000415825 PRDM7Q9NQW5 492 aa6.41□□□□□ -1.38
TRAPPC13-203ENST00000415825 PICK1Q9NRD5 415 aa6.41□□□□□ -1.38
TRAPPC13-203ENST00000415825 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.41□□□□□ -1.38
TRAPPC13-203ENST00000415825 PTPN12Q05209 780 aaKnown RBP6.4□□□□□ -1.38
TRAPPC13-203ENST00000415825 CIAPIN1Q6FI81 312 aa6.4□□□□□ -1.38
TRAPPC13-203ENST00000415825 KRTAP4-5Q9BYR2 181 aa6.4□□□□□ -1.38
TRAPPC13-203ENST00000415825 KRT82Q9NSB4 513 aa6.4□□□□□ -1.38
TRAPPC13-203ENST00000415825 LEFTY1O75610 366 aa6.39□□□□□ -1.39
TRAPPC13-203ENST00000415825 MTMR3Q13615 1198 aa6.39□□□□□ -1.39
TRAPPC13-203ENST00000415825 RPS26P11Q5JNZ5 115 aaPredicted RBP6.39□□□□□ -1.39
TRAPPC13-203ENST00000415825 KIAA0319Q5VV43 1072 aa6.39□□□□□ -1.39
TRAPPC13-203ENST00000415825 GJD3Q8N144 294 aa6.39□□□□□ -1.39
TRAPPC13-203ENST00000415825 CCDC86Q9H6F5 360 aaKnown RBP6.39□□□□□ -1.39
TRAPPC13-203ENST00000415825 PPP4R2Q9NY27 417 aa6.39□□□□□ -1.39
TRAPPC13-203ENST00000415825 CTNND2Q9UQB3 1225 aa6.39□□□□□ -1.39
TRAPPC13-203ENST00000415825 TCAF2A6NFQ2 919 aa6.38□□□□□ -1.39
TRAPPC13-203ENST00000415825 ITPKAP23677 461 aa6.38□□□□□ -1.39
TRAPPC13-203ENST00000415825 CTSWP56202 376 aa6.38□□□□□ -1.39
TRAPPC13-203ENST00000415825 FKBP4Q02790 459 aaKnown RBP eCLIP6.38□□□□□ -1.39
TRAPPC13-203ENST00000415825 ECM1Q16610 540 aa6.38□□□□□ -1.39
TRAPPC13-203ENST00000415825 LCNL1Q6ZST4 164 aa6.38□□□□□ -1.39
TRAPPC13-203ENST00000415825 KCNB2Q92953 911 aa6.38□□□□□ -1.39
TRAPPC13-203ENST00000415825 DISC1Q9NRI5 854 aa6.38□□□□□ -1.39
TRAPPC13-203ENST00000415825 SERPINA10Q9UK55 444 aa6.38□□□□□ -1.39
TRAPPC13-203ENST00000415825 TRAK1Q9UPV9 953 aa6.38□□□□□ -1.39
TRAPPC13-203ENST00000415825 GADD45BO75293 160 aaPredicted RBP6.37□□□□□ -1.39
TRAPPC13-203ENST00000415825 ABL1P00519 1130 aa6.37□□□□□ -1.39
TRAPPC13-203ENST00000415825 GSTP1P09211 210 aaKnown RBP6.37□□□□□ -1.39
TRAPPC13-203ENST00000415825 RAC2P15153 192 aa6.37□□□□□ -1.39
TRAPPC13-203ENST00000415825 CLCN7P51798 805 aa6.37□□□□□ -1.39
TRAPPC13-203ENST00000415825 KIF4BQ2VIQ3 1234 aa6.37□□□□□ -1.39
TRAPPC13-203ENST00000415825 PRR23BQ6ZRT6 265 aa6.37□□□□□ -1.39
TRAPPC13-203ENST00000415825 TTLL10Q6ZVT0 673 aa6.37□□□□□ -1.39
TRAPPC13-203ENST00000415825 DIRC2Q96SL1 478 aa6.37□□□□□ -1.39
TRAPPC13-203ENST00000415825 TNKS2Q9H2K2 1166 aa6.37□□□□□ -1.39
TRAPPC13-203ENST00000415825 BRPF3Q9ULD4 1205 aa6.37□□□□□ -1.39
TRAPPC13-203ENST00000415825 PLAGL2Q9UPG8 496 aa6.37□□□□□ -1.39
TRAPPC13-203ENST00000415825 NPIPB6E9PJ23 425 aa6.36□□□□□ -1.39
TRAPPC13-203ENST00000415825 IGF2BP3O00425 579 aaKnown RBP eCLIP6.36□□□□□ -1.39
TRAPPC13-203ENST00000415825 C1QTNF9P0C862 333 aa6.36□□□□□ -1.39
TRAPPC13-203ENST00000415825 NPR3P17342 541 aa6.36□□□□□ -1.39
TRAPPC13-203ENST00000415825 ACSBG1Q96GR2 724 aa6.36□□□□□ -1.39
TRAPPC13-203ENST00000415825 NSUN3Q9H649 340 aaKnown RBP6.36□□□□□ -1.39
TRAPPC13-203ENST00000415825 GPN3Q9UHW5 284 aaPredicted RBP6.36□□□□□ -1.39
TRAPPC13-203ENST00000415825 FAM155AB1AL88 458 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC13-203ENST00000415825 FZD6O60353 706 aa6.35□□□□□ -1.39
TRAPPC13-203ENST00000415825 CPNE3O75131 537 aaKnown RBP6.35□□□□□ -1.39
TRAPPC13-203ENST00000415825 BUD31P41223 144 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC13-203ENST00000415825 ZNF157P51786 506 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC13-203ENST00000415825 PDE3BQ13370 1112 aa6.35□□□□□ -1.39
TRAPPC13-203ENST00000415825 LCE5AQ5TCM9 118 aa6.35□□□□□ -1.39
TRAPPC13-203ENST00000415825 C1QL4Q86Z23 238 aa6.35□□□□□ -1.39
TRAPPC13-203ENST00000415825 WDR89Q96FK6 387 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC13-203ENST00000415825 EPB41L4BQ9H329 900 aa6.35□□□□□ -1.39
TRAPPC13-203ENST00000415825 DCP1AQ9NPI6 582 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC13-203ENST00000415825 CCDC87Q9NVE4 849 aa6.35□□□□□ -1.39
TRAPPC13-203ENST00000415825 KRTAP9-7A8MTY7 169 aa6.34□□□□□ -1.39
TRAPPC13-203ENST00000415825 INHBBP09529 407 aa6.34□□□□□ -1.39
TRAPPC13-203ENST00000415825 KCNA10Q16322 511 aa6.34□□□□□ -1.39
TRAPPC13-203ENST00000415825 CDC37L1Q7L3B6 337 aa6.34□□□□□ -1.39
TRAPPC13-203ENST00000415825 RNF214Q8ND24 703 aa6.34□□□□□ -1.39
TRAPPC13-203ENST00000415825 ISL2Q96A47 359 aa6.34□□□□□ -1.39
TRAPPC13-203ENST00000415825 FOXQ1Q9C009 403 aa6.34□□□□□ -1.39
TRAPPC13-203ENST00000415825 SLAIN2Q9P270 581 aa6.34□□□□□ -1.39
TRAPPC13-203ENST00000415825 NDUFB5O43674 189 aa6.33□□□□□ -1.4
TRAPPC13-203ENST00000415825 NUAK1O60285 661 aa6.33□□□□□ -1.4
TRAPPC13-203ENST00000415825 ZNF862O60290 1169 aa6.33□□□□□ -1.4
TRAPPC13-203ENST00000415825 DTHD1Q6ZMT9 781 aa6.33□□□□□ -1.4
TRAPPC13-203ENST00000415825 CILP2Q8IUL8 1156 aa6.33□□□□□ -1.4
TRAPPC13-203ENST00000415825 NPAS4Q8IUM7 802 aa6.33□□□□□ -1.4
TRAPPC13-203ENST00000415825 EMILIN2Q9BXX0 1053 aa6.33□□□□□ -1.4
TRAPPC13-203ENST00000415825 NPHS2Q9NP85 383 aa6.33□□□□□ -1.4
TRAPPC13-203ENST00000415825 PRDM10Q9NQV6 1147 aa6.33□□□□□ -1.4
TRAPPC13-203ENST00000415825 PRDM5Q9NQX1 630 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC13-203ENST00000415825 TMEM39AQ9NV64 488 aa6.33□□□□□ -1.4
TRAPPC13-203ENST00000415825 TMEM238LA0A1B0GVL6 79 aa6.32□□□□□ -1.4
TRAPPC13-203ENST00000415825 GDNFP39905 211 aa6.32□□□□□ -1.4
TRAPPC13-203ENST00000415825 ERVK-24P63145 666 aa6.32□□□□□ -1.4
TRAPPC13-203ENST00000415825 FYB2Q5VWT5 728 aa6.32□□□□□ -1.4
TRAPPC13-203ENST00000415825 ATG14Q6ZNE5 492 aa6.32□□□□□ -1.4
TRAPPC13-203ENST00000415825 AMIGO3Q86WK7 504 aa6.32□□□□□ -1.4
TRAPPC13-203ENST00000415825 SPACA3Q8IXA5 215 aa6.32□□□□□ -1.4
TRAPPC13-203ENST00000415825 CARS2Q9HA77 564 aaKnown RBP6.32□□□□□ -1.4
TRAPPC13-203ENST00000415825 U3KQE9 123 aa6.32□□□□□ -1.4
TRAPPC13-203ENST00000415825 SSFA2P28290 1259 aa6.31□□□□□ -1.4
TRAPPC13-203ENST00000415825 KCT2Q8NC54 265 aa6.31□□□□□ -1.4
TRAPPC13-203ENST00000415825 TMC1Q8TDI8 760 aa6.31□□□□□ -1.4
TRAPPC13-203ENST00000415825 PITPNM2Q9BZ72 1349 aa6.3□□□□□ -1.4
TRAPPC13-203ENST00000415825 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.3□□□□□ -1.4
TRAPPC13-203ENST00000415825 PRPF40BQ6NWY9 871 aaKnown RBP6.3□□□□□ -1.4
TRAPPC13-203ENST00000415825 KCNN1Q92952 543 aa6.3□□□□□ -1.4
TRAPPC13-203ENST00000415825 HEXIM2Q96MH2 286 aaKnown RBP6.3□□□□□ -1.4
TRAPPC13-203ENST00000415825 SLC26A8Q96RN1 970 aa6.3□□□□□ -1.4
TRAPPC13-203ENST00000415825 CBX8Q9HC52 389 aa6.3□□□□□ -1.4
TRAPPC13-203ENST00000415825 ABCB6Q9NP58 842 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms