RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 C1QL4Q86Z23 238 aa4.87□□□□□ -1.63
LINC00428-201ENST00000415620 GALNT12Q8IXK2 581 aa4.87□□□□□ -1.63
LINC00428-201ENST00000415620 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.87□□□□□ -1.63
LINC00428-201ENST00000415620 CLASP1Q7Z460 1538 aa4.87□□□□□ -1.63
LINC00428-201ENST00000415620 ZNF503-AS2A6NEH8 195 aa4.86□□□□□ -1.63
LINC00428-201ENST00000415620 ZSCAN22P10073 491 aaPredicted RBP4.86□□□□□ -1.63
LINC00428-201ENST00000415620 SSFA2P28290 1259 aa4.86□□□□□ -1.63
LINC00428-201ENST00000415620 CDK5R2Q13319 367 aa4.86□□□□□ -1.63
LINC00428-201ENST00000415620 MTMR3Q13615 1198 aa4.86□□□□□ -1.63
LINC00428-201ENST00000415620 SPRED3Q2MJR0 410 aa4.86□□□□□ -1.63
LINC00428-201ENST00000415620 LCNL1Q6ZST4 164 aa4.86□□□□□ -1.63
LINC00428-201ENST00000415620 PIDD1Q9HB75 910 aa4.86□□□□□ -1.63
LINC00428-201ENST00000415620 RAPGEFL1Q9UHV5 662 aa4.86□□□□□ -1.63
LINC00428-201ENST00000415620 FAM13AO94988 1023 aa4.85□□□□□ -1.63
LINC00428-201ENST00000415620 CEACAM5P06731 702 aa4.85□□□□□ -1.63
LINC00428-201ENST00000415620 PDE3AQ14432 1141 aa4.85□□□□□ -1.63
LINC00428-201ENST00000415620 WDR18Q9BV38 432 aa4.85□□□□□ -1.63
LINC00428-201ENST00000415620 ZNF576Q9H609 170 aa4.85□□□□□ -1.63
LINC00428-201ENST00000415620 PPP1R9AQ9ULJ8 1098 aa4.85□□□□□ -1.63
LINC00428-201ENST00000415620 BAZ1BQ9UIG0 1483 aaKnown RBP4.85□□□□□ -1.63
LINC00428-201ENST00000415620 URB2Q14146 1524 aaKnown RBP4.85□□□□□ -1.63
LINC00428-201ENST00000415620 TSPOAP1O95153 1857 aa4.85□□□□□ -1.63
LINC00428-201ENST00000415620 DCAF1Q9Y4B6 1507 aa4.84□□□□□ -1.63
LINC00428-201ENST00000415620 TMEM88BA6NKF7 163 aa4.84□□□□□ -1.63
LINC00428-201ENST00000415620 POLR3DP05423 398 aaPredicted RBP4.84□□□□□ -1.63
LINC00428-201ENST00000415620 ITPKAP23677 461 aa4.84□□□□□ -1.63
LINC00428-201ENST00000415620 AFMP43652 599 aa4.84□□□□□ -1.63
LINC00428-201ENST00000415620 AAMPQ13685 434 aa4.84□□□□□ -1.63
LINC00428-201ENST00000415620 KIAA0319Q5VV43 1072 aa4.84□□□□□ -1.63
LINC00428-201ENST00000415620 TTLL10Q6ZVT0 673 aa4.84□□□□□ -1.63
LINC00428-201ENST00000415620 SYDE1Q6ZW31 735 aaPredicted RBP4.84□□□□□ -1.63
LINC00428-201ENST00000415620 ATXN3LQ9H3M9 355 aa4.84□□□□□ -1.63
LINC00428-201ENST00000415620 LIN7BQ9HAP6 207 aa4.84□□□□□ -1.63
LINC00428-201ENST00000415620 CCDC87Q9NVE4 849 aa4.84□□□□□ -1.63
LINC00428-201ENST00000415620 LMCD1Q9NZU5 365 aa4.84□□□□□ -1.63
LINC00428-201ENST00000415620 CRIM1Q9NZV1 1036 aa4.84□□□□□ -1.63
LINC00428-201ENST00000415620 SNX11Q9Y5W9 270 aa4.84□□□□□ -1.63
LINC00428-201ENST00000415620 U3KQE9 123 aa4.84□□□□□ -1.63
LINC00428-201ENST00000415620 TMPRSS2O15393 492 aa4.83□□□□□ -1.64
LINC00428-201ENST00000415620 SLFN14P0C7P3 912 aa4.83□□□□□ -1.64
LINC00428-201ENST00000415620 BUD31P41223 144 aaPredicted RBP4.83□□□□□ -1.64
LINC00428-201ENST00000415620 OXCT1P55809 520 aa4.83□□□□□ -1.64
LINC00428-201ENST00000415620 ECM1Q16610 540 aa4.83□□□□□ -1.64
LINC00428-201ENST00000415620 LIN37Q96GY3 246 aaPredicted RBP4.83□□□□□ -1.64
LINC00428-201ENST00000415620 GAPVD1Q14C86 1478 aa4.82□□□□□ -1.64
LINC00428-201ENST00000415620 NFIBO00712 420 aa4.82□□□□□ -1.64
LINC00428-201ENST00000415620 HNRNPUQ00839 825 aaKnown RBP eCLIP4.82□□□□□ -1.64
LINC00428-201ENST00000415620 PTPN12Q05209 780 aaKnown RBP4.82□□□□□ -1.64
LINC00428-201ENST00000415620 AP3B2Q13367 1082 aa4.82□□□□□ -1.64
LINC00428-201ENST00000415620 SF3B2Q13435 895 aaKnown RBP4.82□□□□□ -1.64
LINC00428-201ENST00000415620 SMYD4Q8IYR2 804 aaPredicted RBP4.82□□□□□ -1.64
LINC00428-201ENST00000415620 ASB11Q8WXH4 323 aa4.82□□□□□ -1.64
LINC00428-201ENST00000415620 PLAGL2Q9UPG8 496 aa4.82□□□□□ -1.64
LINC00428-201ENST00000415620 PCDHGC5Q9Y5F6 944 aa4.82□□□□□ -1.64
LINC00428-201ENST00000415620 GLI1P08151 1106 aa4.81□□□□□ -1.64
LINC00428-201ENST00000415620 ID3Q02535 119 aa4.81□□□□□ -1.64
LINC00428-201ENST00000415620 FKBP4Q02790 459 aaKnown RBP eCLIP4.81□□□□□ -1.64
LINC00428-201ENST00000415620 ZP2Q05996 745 aa4.81□□□□□ -1.64
LINC00428-201ENST00000415620 PHLDB3Q6NSJ2 640 aa4.81□□□□□ -1.64
LINC00428-201ENST00000415620 MPZL3Q6UWV2 235 aa4.81□□□□□ -1.64
LINC00428-201ENST00000415620 FANCD2OSQ96PS1 177 aa4.81□□□□□ -1.64
LINC00428-201ENST00000415620 DUSP23Q9BVJ7 150 aa4.81□□□□□ -1.64
LINC00428-201ENST00000415620 KRTAP9-3Q9BYQ3 159 aa4.81□□□□□ -1.64
LINC00428-201ENST00000415620 PRDM7Q9NQW5 492 aa4.81□□□□□ -1.64
LINC00428-201ENST00000415620 PCOLCE2Q9UKZ9 415 aa4.81□□□□□ -1.64
LINC00428-201ENST00000415620 CTNND2Q9UQB3 1225 aa4.81□□□□□ -1.64
LINC00428-201ENST00000415620 FANCD2Q9BXW9 1451 aa4.81□□□□□ -1.64
LINC00428-201ENST00000415620 CADPSQ9ULU8 1353 aa4.8□□□□□ -1.64
LINC00428-201ENST00000415620 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.8□□□□□ -1.64
LINC00428-201ENST00000415620 RNGTTO60942 597 aaKnown RBP4.8□□□□□ -1.64
LINC00428-201ENST00000415620 LEFTY1O75610 366 aa4.8□□□□□ -1.64
LINC00428-201ENST00000415620 C1QTNF9P0C862 333 aa4.8□□□□□ -1.64
LINC00428-201ENST00000415620 LIG1P18858 919 aa4.8□□□□□ -1.64
LINC00428-201ENST00000415620 ITIH2P19823 946 aa4.8□□□□□ -1.64
LINC00428-201ENST00000415620 IKZF1Q13422 519 aa4.8□□□□□ -1.64
LINC00428-201ENST00000415620 PRR23BQ6ZRT6 265 aa4.8□□□□□ -1.64
LINC00428-201ENST00000415620 AMIGO3Q86WK7 504 aa4.8□□□□□ -1.64
LINC00428-201ENST00000415620 WDR89Q96FK6 387 aaPredicted RBP4.8□□□□□ -1.64
LINC00428-201ENST00000415620 TNKS2Q9H2K2 1166 aa4.8□□□□□ -1.64
LINC00428-201ENST00000415620 SERPINA10Q9UK55 444 aa4.8□□□□□ -1.64
LINC00428-201ENST00000415620 ZCCHC6Q5VYS8 1495 aaKnown RBP4.8□□□□□ -1.64
LINC00428-201ENST00000415620 DIP2BQ9P265 1576 aa4.79□□□□□ -1.64
LINC00428-201ENST00000415620 ZNF862O60290 1169 aa4.79□□□□□ -1.64
LINC00428-201ENST00000415620 KIF4BQ2VIQ3 1234 aa4.79□□□□□ -1.64
LINC00428-201ENST00000415620 TMEM67Q5HYA8 995 aa4.79□□□□□ -1.64
LINC00428-201ENST00000415620 RPS26P11Q5JNZ5 115 aaPredicted RBP4.79□□□□□ -1.64
LINC00428-201ENST00000415620 USPL1Q5W0Q7 1092 aa4.79□□□□□ -1.64
LINC00428-201ENST00000415620 PRPF40BQ6NWY9 871 aaKnown RBP4.79□□□□□ -1.64
LINC00428-201ENST00000415620 FBXO15Q8NCQ5 510 aaPredicted RBP4.79□□□□□ -1.64
LINC00428-201ENST00000415620 KIRREL1Q96J84 757 aa4.79□□□□□ -1.64
LINC00428-201ENST00000415620 KRTAP17-1Q9BYP8 105 aa4.79□□□□□ -1.64
LINC00428-201ENST00000415620 CCDC86Q9H6F5 360 aaKnown RBP4.79□□□□□ -1.64
LINC00428-201ENST00000415620 ABCB6Q9NP58 842 aa4.79□□□□□ -1.64
LINC00428-201ENST00000415620 SSU72Q9NP77 194 aaKnown RBP4.79□□□□□ -1.64
LINC00428-201ENST00000415620 DISC1Q9NRI5 854 aa4.79□□□□□ -1.64
LINC00428-201ENST00000415620 INHBBP09529 407 aa4.78□□□□□ -1.64
LINC00428-201ENST00000415620 TMEM253P0C7T8 217 aa4.78□□□□□ -1.64
LINC00428-201ENST00000415620 CTSWP56202 376 aa4.78□□□□□ -1.64
LINC00428-201ENST00000415620 TTLL4Q14679 1199 aa4.78□□□□□ -1.64
LINC00428-201ENST00000415620 FYB2Q5VWT5 728 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms