RNA–Protein interactions for RNA: ENST00000415482.6

PTPN12-203, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5 BASIC

Gene PTPN12, Length 2,316 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-203ENST00000415482 SAP30BPQ9UHR5 308 aaKnown RBP11.64□□□□□ -0.55
PTPN12-203ENST00000415482 GJA3Q9Y6H8 435 aa11.64□□□□□ -0.55
PTPN12-203ENST00000415482 DDX60LQ5H9U9 1706 aaKnown RBP11.64□□□□□ -0.55
PTPN12-203ENST00000415482 TIAM2Q8IVF5 1701 aa11.64□□□□□ -0.55
PTPN12-203ENST00000415482 GMPSP49915 693 aaPredicted RBP11.64□□□□□ -0.55
PTPN12-203ENST00000415482 CACNB3P54284 484 aa11.64□□□□□ -0.55
PTPN12-203ENST00000415482 PPARAQ07869 468 aa11.64□□□□□ -0.55
PTPN12-203ENST00000415482 KRT32Q14532 448 aa11.64□□□□□ -0.55
PTPN12-203ENST00000415482 RUFY3Q7L099 469 aa11.64□□□□□ -0.55
PTPN12-203ENST00000415482 CERS3Q8IU89 383 aa11.64□□□□□ -0.55
PTPN12-203ENST00000415482 SNX21Q969T3 373 aa11.64□□□□□ -0.55
PTPN12-203ENST00000415482 TTC14Q96N46 770 aa11.64□□□□□ -0.55
PTPN12-203ENST00000415482 NEK1Q96PY6 1258 aa11.64□□□□□ -0.55
PTPN12-203ENST00000415482 MCM9Q9NXL9 1143 aa11.64□□□□□ -0.55
PTPN12-203ENST00000415482 RNF181Q9P0P0 153 aa11.64□□□□□ -0.55
PTPN12-203ENST00000415482 LAMB1P07942 1786 aa11.64□□□□□ -0.55
PTPN12-203ENST00000415482 FLT1P17948 1338 aa11.64□□□□□ -0.55
PTPN12-203ENST00000415482 MYH1P12882 1939 aa11.63□□□□□ -0.55
PTPN12-203ENST00000415482 DDRGK1Q96HY6 314 aa11.63□□□□□ -0.55
PTPN12-203ENST00000415482 TDRD3Q9H7E2 651 aaKnown RBP11.63□□□□□ -0.55
PTPN12-203ENST00000415482 CYP46A1Q9Y6A2 500 aa11.63□□□□□ -0.55
PTPN12-203ENST00000415482 NEDD4P46934 1319 aa11.63□□□□□ -0.55
PTPN12-203ENST00000415482 RPS6KB1P23443 525 aa11.63□□□□□ -0.55
PTPN12-203ENST00000415482 PSMA5P28066 241 aa11.63□□□□□ -0.55
PTPN12-203ENST00000415482 NFIAQ12857 509 aa11.63□□□□□ -0.55
PTPN12-203ENST00000415482 PICALMQ13492 652 aa11.63□□□□□ -0.55
PTPN12-203ENST00000415482 C9orf131Q5VYM1 1079 aa11.63□□□□□ -0.55
PTPN12-203ENST00000415482 BLOC1S2Q6QNY1 142 aa11.63□□□□□ -0.55
PTPN12-203ENST00000415482 LARP6Q9BRS8 491 aaKnown RBP11.63□□□□□ -0.55
PTPN12-203ENST00000415482 ANAPC4Q9UJX5 808 aa11.63□□□□□ -0.55
PTPN12-203ENST00000415482 SPDYE2BA6NHP3 402 aa11.62□□□□□ -0.55
PTPN12-203ENST00000415482 EGFRP00533 1210 aa11.62□□□□□ -0.55
PTPN12-203ENST00000415482 SPDYE6P0CI01 402 aa11.62□□□□□ -0.55
PTPN12-203ENST00000415482 SBK1Q52WX2 424 aa11.62□□□□□ -0.55
PTPN12-203ENST00000415482 NOL8Q76FK4 1167 aaKnown RBP11.62□□□□□ -0.55
PTPN12-203ENST00000415482 CHST3Q7LGC8 479 aa11.62□□□□□ -0.55
PTPN12-203ENST00000415482 OGFOD1Q8N543 542 aa11.62□□□□□ -0.55
PTPN12-203ENST00000415482 PDRG1Q9NUG6 133 aa11.62□□□□□ -0.55
PTPN12-203ENST00000415482 HDAC9Q9UKV0 1011 aa11.62□□□□□ -0.55
PTPN12-203ENST00000415482 PLCD1P51178 756 aa11.61□□□□□ -0.55
PTPN12-203ENST00000415482 DLGAP5Q15398 846 aa11.61□□□□□ -0.55
PTPN12-203ENST00000415482 AKNAD1Q5T1N1 836 aa11.61□□□□□ -0.55
PTPN12-203ENST00000415482 C12orf60Q5U649 245 aa11.61□□□□□ -0.55
PTPN12-203ENST00000415482 ZFPM1Q8IX07 1006 aa11.61□□□□□ -0.55
PTPN12-203ENST00000415482 MB21D2Q8IYB1 491 aaPredicted RBP11.61□□□□□ -0.55
PTPN12-203ENST00000415482 LRRC2Q9BYS8 371 aa11.61□□□□□ -0.55
PTPN12-203ENST00000415482 ARPP21Q9UBL0 812 aaPredicted RBP11.61□□□□□ -0.55
PTPN12-203ENST00000415482 B4E1Z4 1266 aa11.61□□□□□ -0.55
PTPN12-203ENST00000415482 ST18O60284 1047 aa11.61□□□□□ -0.55
PTPN12-203ENST00000415482 RPS12P25398 132 aaKnown RBP11.61□□□□□ -0.55
PTPN12-203ENST00000415482 AK2P54819 239 aa11.61□□□□□ -0.55
PTPN12-203ENST00000415482 ANTXR2P58335 489 aa11.61□□□□□ -0.55
PTPN12-203ENST00000415482 ZNF280AP59817 542 aaPredicted RBP11.61□□□□□ -0.55
PTPN12-203ENST00000415482 EXOSC10Q01780 885 aaKnown RBP11.61□□□□□ -0.55
PTPN12-203ENST00000415482 MICALL2Q8IY33 904 aa11.61□□□□□ -0.55
PTPN12-203ENST00000415482 STAG1Q8WVM7 1258 aa11.61□□□□□ -0.55
PTPN12-203ENST00000415482 DYNLL2Q96FJ2 89 aa11.61□□□□□ -0.55
PTPN12-203ENST00000415482 ZBED3Q96IU2 234 aaPredicted RBP11.61□□□□□ -0.55
PTPN12-203ENST00000415482 FAM198AQ9UFP1 575 aa11.61□□□□□ -0.55
PTPN12-203ENST00000415482 CLRN2A0PK11 232 aa11.6□□□□□ -0.55
PTPN12-203ENST00000415482 TCP10Q12799 353 aa11.6□□□□□ -0.55
PTPN12-203ENST00000415482 MFSD6Q6ZSS7 791 aa11.6□□□□□ -0.55
PTPN12-203ENST00000415482 CYB5R4Q7L1T6 521 aa11.6□□□□□ -0.55
PTPN12-203ENST00000415482 DHX32Q7L7V1 743 aaKnown RBP11.6□□□□□ -0.55
PTPN12-203ENST00000415482 HSCBQ8IWL3 235 aa11.6□□□□□ -0.55
PTPN12-203ENST00000415482 NCOA7Q8NI08 942 aa11.6□□□□□ -0.55
PTPN12-203ENST00000415482 DPF2Q92785 391 aa11.6□□□□□ -0.55
PTPN12-203ENST00000415482 MYOZ2Q9NPC6 264 aa11.6□□□□□ -0.55
PTPN12-203ENST00000415482 CNOT7Q9UIV1 285 aaKnown RBP11.6□□□□□ -0.55
PTPN12-203ENST00000415482 PRDM1O75626 825 aa11.6□□□□□ -0.55
PTPN12-203ENST00000415482 POLR3DP05423 398 aaPredicted RBP11.6□□□□□ -0.55
PTPN12-203ENST00000415482 TOB2Q14106 344 aaPredicted RBP11.6□□□□□ -0.55
PTPN12-203ENST00000415482 BECN1Q14457 450 aa11.6□□□□□ -0.55
PTPN12-203ENST00000415482 NBPF9Q3BBW0 867 aa11.6□□□□□ -0.55
PTPN12-203ENST00000415482 RBM26Q5T8P6 1007 aaKnown RBP11.6□□□□□ -0.55
PTPN12-203ENST00000415482 SAMD7Q7Z3H4 446 aa11.6□□□□□ -0.55
PTPN12-203ENST00000415482 MTMR14Q8NCE2 650 aa11.6□□□□□ -0.55
PTPN12-203ENST00000415482 GPHNQ9NQX3 736 aaPredicted RBP11.6□□□□□ -0.55
PTPN12-203ENST00000415482 ZNF70Q9UC06 446 aaPredicted RBP11.6□□□□□ -0.55
PTPN12-203ENST00000415482 DDNO94850 711 aaPredicted RBP11.59□□□□□ -0.55
PTPN12-203ENST00000415482 RRP12Q5JTH9 1297 aaKnown RBP11.59□□□□□ -0.55
PTPN12-203ENST00000415482 GPC2Q8N158 579 aa11.59□□□□□ -0.55
PTPN12-203ENST00000415482 IDI2Q9BXS1 227 aa11.59□□□□□ -0.55
PTPN12-203ENST00000415482 OSBPL5Q9H0X9 879 aaPredicted RBP11.59□□□□□ -0.55
PTPN12-203ENST00000415482 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.59□□□□□ -0.55
PTPN12-203ENST00000415482 K7ELQ4 463 aaPredicted RBP11.59□□□□□ -0.55
PTPN12-203ENST00000415482 WNT10BO00744 389 aa11.59□□□□□ -0.55
PTPN12-203ENST00000415482 KDM4AO75164 1064 aa11.59□□□□□ -0.55
PTPN12-203ENST00000415482 HMGB1P09429 215 aaKnown RBP11.59□□□□□ -0.55
PTPN12-203ENST00000415482 FGRP09769 529 aa11.59□□□□□ -0.55
PTPN12-203ENST00000415482 SLURP2P0DP57 97 aa11.59□□□□□ -0.55
PTPN12-203ENST00000415482 SPDYE2Q495Y8 402 aa11.59□□□□□ -0.55
PTPN12-203ENST00000415482 TBC1D10BQ4KMP7 808 aaPredicted RBP11.59□□□□□ -0.55
PTPN12-203ENST00000415482 Q6ZUG5 572 aa11.59□□□□□ -0.55
PTPN12-203ENST00000415482 SH3BP5LQ7L8J4 393 aa11.59□□□□□ -0.55
PTPN12-203ENST00000415482 RALYLQ86SE5 291 aaKnown RBP11.59□□□□□ -0.55
PTPN12-203ENST00000415482 SLC44A5Q8NCS7 719 aa11.59□□□□□ -0.55
PTPN12-203ENST00000415482 TOMM22Q9NS69 142 aa11.59□□□□□ -0.55
PTPN12-203ENST00000415482 ZSWIM5Q9P217 1185 aa11.59□□□□□ -0.55
PTPN12-203ENST00000415482 ROBO3Q96MS0 1386 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms